RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
FLOT1-206ENST00000445853 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
FLOT1-206ENST00000445853 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
FLOT1-206ENST00000445853 APBA3O96018 575 aa16.05■□□□□ 0.16
FLOT1-206ENST00000445853 PLEKHO1Q53GL0 409 aaPredicted RBP16.05■□□□□ 0.16
FLOT1-206ENST00000445853 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
FLOT1-206ENST00000445853 LRRC37A3O60309 1634 aa16.05■□□□□ 0.16
FLOT1-206ENST00000445853 KDRP35968 1356 aa16.04■□□□□ 0.16
FLOT1-206ENST00000445853 PPP2R1AP30153 589 aa16.04■□□□□ 0.16
FLOT1-206ENST00000445853 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
FLOT1-206ENST00000445853 MAP2P11137 1827 aaKnown RBP16.03■□□□□ 0.16
FLOT1-206ENST00000445853 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
FLOT1-206ENST00000445853 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
FLOT1-206ENST00000445853 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
FLOT1-206ENST00000445853 USHBP1Q8N6Y0 703 aa16.03■□□□□ 0.16
FLOT1-206ENST00000445853 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
FLOT1-206ENST00000445853 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
FLOT1-206ENST00000445853 MEGF6O75095 1541 aa16.02■□□□□ 0.15
FLOT1-206ENST00000445853 CAMKK2Q96RR4 588 aa16■□□□□ 0.15
FLOT1-206ENST00000445853 WNK3Q9BYP7 1800 aa16■□□□□ 0.15
FLOT1-206ENST00000445853 RGPD1P0DJD0 1748 aa15.99■□□□□ 0.15
FLOT1-206ENST00000445853 C1orf141Q5JVX7 400 aa15.99■□□□□ 0.15
FLOT1-206ENST00000445853 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
FLOT1-206ENST00000445853 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
FLOT1-206ENST00000445853 FCHSD2O94868 740 aa15.98■□□□□ 0.15
FLOT1-206ENST00000445853 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
FLOT1-206ENST00000445853 ERVV-2B6SEH9 535 aa15.97■□□□□ 0.15
FLOT1-206ENST00000445853 CYP27B1O15528 508 aa15.97■□□□□ 0.15
FLOT1-206ENST00000445853 NEFMP07197 916 aa15.97■□□□□ 0.15
FLOT1-206ENST00000445853 PHKG2P15735 406 aa15.97■□□□□ 0.15
FLOT1-206ENST00000445853 EN1Q05925 392 aaPredicted RBP15.97■□□□□ 0.15
FLOT1-206ENST00000445853 SLC27A3Q5K4L6 730 aa15.97■□□□□ 0.15
FLOT1-206ENST00000445853 DEFB132Q7Z7B7 95 aa15.97■□□□□ 0.15
FLOT1-206ENST00000445853 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
FLOT1-206ENST00000445853 PRIM1P49642 420 aaKnown RBP15.96■□□□□ 0.15
FLOT1-206ENST00000445853 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.15
FLOT1-206ENST00000445853 SMARCC1Q92922 1105 aaPredicted RBP15.96■□□□□ 0.15
FLOT1-206ENST00000445853 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
FLOT1-206ENST00000445853 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
FLOT1-206ENST00000445853 ZNF530Q6P9A1 599 aaPredicted RBP15.94■□□□□ 0.14
FLOT1-206ENST00000445853 COL3A1P02461 1466 aaPredicted RBP15.93■□□□□ 0.14
FLOT1-206ENST00000445853 KCNQ2O43526 872 aa15.93■□□□□ 0.14
FLOT1-206ENST00000445853 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
FLOT1-206ENST00000445853 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.14
FLOT1-206ENST00000445853 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
FLOT1-206ENST00000445853 SYTL4Q96C24 671 aaPredicted RBP15.93■□□□□ 0.14
FLOT1-206ENST00000445853 ACSBG1Q96GR2 724 aa15.93■□□□□ 0.14
FLOT1-206ENST00000445853 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
FLOT1-206ENST00000445853 AEBP1Q8IUX7 1158 aa15.92■□□□□ 0.14
FLOT1-206ENST00000445853 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
FLOT1-206ENST00000445853 HMOX1P09601 288 aa15.91■□□□□ 0.14
FLOT1-206ENST00000445853 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
FLOT1-206ENST00000445853 PKD1L3Q7Z443 1732 aa15.9■□□□□ 0.14
FLOT1-206ENST00000445853 RGPD3A6NKT7 1758 aaPredicted RBP15.9■□□□□ 0.14
FLOT1-206ENST00000445853 RGPD4Q7Z3J3 1758 aa15.9■□□□□ 0.14
FLOT1-206ENST00000445853 HTATSF1O43719 755 aaKnown RBP15.89■□□□□ 0.13
FLOT1-206ENST00000445853 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
FLOT1-206ENST00000445853 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
FLOT1-206ENST00000445853 NHSQ6T4R5 1651 aa15.89■□□□□ 0.13
FLOT1-206ENST00000445853 ANP32CO43423 234 aa15.88■□□□□ 0.13
FLOT1-206ENST00000445853 CABP4P57796 275 aa15.88■□□□□ 0.13
FLOT1-206ENST00000445853 TNS1Q9HBL0 1735 aaKnown RBP15.88■□□□□ 0.13
FLOT1-206ENST00000445853 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
FLOT1-206ENST00000445853 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
FLOT1-206ENST00000445853 PRKAR2BP31323 418 aa15.87■□□□□ 0.13
FLOT1-206ENST00000445853 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
FLOT1-206ENST00000445853 PROM2Q8N271 834 aa15.86■□□□□ 0.13
FLOT1-206ENST00000445853 PIGBQ92521 554 aa15.86■□□□□ 0.13
FLOT1-206ENST00000445853 STK32BQ9NY57 414 aa15.86■□□□□ 0.13
FLOT1-206ENST00000445853 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
FLOT1-206ENST00000445853 RTF1Q92541 710 aaKnown RBP15.85■□□□□ 0.13
FLOT1-206ENST00000445853 WDR43Q15061 677 aaKnown RBP eCLIP15.84■□□□□ 0.13
FLOT1-206ENST00000445853 CCNL1Q9UK58 526 aaPredicted RBP15.84■□□□□ 0.13
FLOT1-206ENST00000445853 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
FLOT1-206ENST00000445853 PALLDQ8WX93 1383 aa15.84■□□□□ 0.13
FLOT1-206ENST00000445853 SLC52A2Q9HAB3 445 aa15.83■□□□□ 0.12
FLOT1-206ENST00000445853 MAPK8IP3Q9UPT6 1336 aa15.83■□□□□ 0.12
FLOT1-206ENST00000445853 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
FLOT1-206ENST00000445853 RNMTO43148 476 aaKnown RBP15.82■□□□□ 0.12
FLOT1-206ENST00000445853 SLC15A2Q16348 729 aa15.82■□□□□ 0.12
FLOT1-206ENST00000445853 FLAD1Q8NFF5 587 aa15.82■□□□□ 0.12
FLOT1-206ENST00000445853 SHANK3Q9BYB0 1731 aa15.82■□□□□ 0.12
FLOT1-206ENST00000445853 LOC102724428A0A0B4J2F2 783 aa15.81■□□□□ 0.12
FLOT1-206ENST00000445853 SIK1P57059 783 aa15.81■□□□□ 0.12
FLOT1-206ENST00000445853 LMOD3Q0VAK6 560 aa15.81■□□□□ 0.12
FLOT1-206ENST00000445853 TEFQ10587 303 aa15.81■□□□□ 0.12
FLOT1-206ENST00000445853 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
FLOT1-206ENST00000445853 KDM6AO15550 1401 aaPredicted RBP15.8■□□□□ 0.12
FLOT1-206ENST00000445853 PLEKHF1Q96S99 279 aa15.8■□□□□ 0.12
FLOT1-206ENST00000445853 R3HDM1Q15032 1099 aaKnown RBP15.79■□□□□ 0.12
FLOT1-206ENST00000445853 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
FLOT1-206ENST00000445853 SLC16A10Q8TF71 515 aa15.79■□□□□ 0.12
FLOT1-206ENST00000445853 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
FLOT1-206ENST00000445853 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
FLOT1-206ENST00000445853 CEMIPQ8WUJ3 1361 aa15.78■□□□□ 0.12
FLOT1-206ENST00000445853 PNISRQ8TF01 805 aaKnown RBP15.78■□□□□ 0.12
FLOT1-206ENST00000445853 LRRC4BQ9NT99 713 aa15.78■□□□□ 0.12
FLOT1-206ENST00000445853 ASAP1Q9ULH1 1129 aa15.78■□□□□ 0.12
FLOT1-206ENST00000445853 RREB1Q92766 1687 aa15.77■□□□□ 0.12
FLOT1-206ENST00000445853 NFE2L2Q16236 605 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 336.8 ms