RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
LINC01949-201ENST00000445770 SIRT1Q96EB6 747 aa12.39□□□□□ -0.43
LINC01949-201ENST00000445770 CALD1Q05682 793 aaKnown RBP12.38□□□□□ -0.43
LINC01949-201ENST00000445770 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
LINC01949-201ENST00000445770 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
LINC01949-201ENST00000445770 TBX22Q9Y458 520 aa12.38□□□□□ -0.43
LINC01949-201ENST00000445770 ABCC4O15439 1325 aa12.38□□□□□ -0.43
LINC01949-201ENST00000445770 LMOD3Q0VAK6 560 aa12.38□□□□□ -0.43
LINC01949-201ENST00000445770 KNDC1Q76NI1 1749 aa12.37□□□□□ -0.43
LINC01949-201ENST00000445770 MSH6P52701 1360 aa12.37□□□□□ -0.43
LINC01949-201ENST00000445770 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
LINC01949-201ENST00000445770 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
LINC01949-201ENST00000445770 DIP2AQ14689 1571 aa12.37□□□□□ -0.43
LINC01949-201ENST00000445770 CHL1O00533 1208 aa12.37□□□□□ -0.43
LINC01949-201ENST00000445770 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
LINC01949-201ENST00000445770 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
LINC01949-201ENST00000445770 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
LINC01949-201ENST00000445770 HOXC9P31274 260 aa12.35□□□□□ -0.43
LINC01949-201ENST00000445770 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
LINC01949-201ENST00000445770 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
LINC01949-201ENST00000445770 FER1L4A9Z1Z3 1794 aa12.35□□□□□ -0.43
LINC01949-201ENST00000445770 PTCH1Q13635 1447 aa12.35□□□□□ -0.43
LINC01949-201ENST00000445770 SSH2Q76I76 1423 aa12.35□□□□□ -0.43
LINC01949-201ENST00000445770 ANXA1P04083 346 aa12.35□□□□□ -0.43
LINC01949-201ENST00000445770 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
LINC01949-201ENST00000445770 FLT4P35916 1363 aa12.34□□□□□ -0.43
LINC01949-201ENST00000445770 AAMPQ13685 434 aa12.34□□□□□ -0.43
LINC01949-201ENST00000445770 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
LINC01949-201ENST00000445770 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
LINC01949-201ENST00000445770 USP31Q70CQ4 1352 aa12.33□□□□□ -0.44
LINC01949-201ENST00000445770 RGS12O14924 1447 aa12.33□□□□□ -0.44
LINC01949-201ENST00000445770 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
LINC01949-201ENST00000445770 CRB1P82279 1406 aa12.33□□□□□ -0.44
LINC01949-201ENST00000445770 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
LINC01949-201ENST00000445770 API5Q9BZZ5 524 aaKnown RBP12.33□□□□□ -0.44
LINC01949-201ENST00000445770 TOPAZ1Q8N9V7 1692 aa12.33□□□□□ -0.44
LINC01949-201ENST00000445770 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
LINC01949-201ENST00000445770 TBC1D9Q6ZT07 1266 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 KCNQ3O43525 872 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 BECN1Q14457 450 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 EXOC6BQ9Y2D4 811 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
LINC01949-201ENST00000445770 PSME1Q06323 249 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 NBPF6Q5VWK0 638 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 NBPF4Q96M43 638 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 BRPF3Q9ULD4 1205 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 ARHGAP23Q9P227 1491 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
LINC01949-201ENST00000445770 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 IGSF1Q8N6C5 1336 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 BRPF1P55201 1214 aaPredicted RBP12.31□□□□□ -0.44
LINC01949-201ENST00000445770 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
LINC01949-201ENST00000445770 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
LINC01949-201ENST00000445770 SLIT1O75093 1534 aa12.3□□□□□ -0.44
LINC01949-201ENST00000445770 PHAXQ9H814 394 aaKnown RBP12.3□□□□□ -0.44
LINC01949-201ENST00000445770 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
LINC01949-201ENST00000445770 ANKLE2Q86XL3 938 aa12.3□□□□□ -0.44
LINC01949-201ENST00000445770 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
LINC01949-201ENST00000445770 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
LINC01949-201ENST00000445770 GNAT3A8MTJ3 354 aa12.29□□□□□ -0.44
LINC01949-201ENST00000445770 GSE1Q14687 1217 aa12.29□□□□□ -0.44
LINC01949-201ENST00000445770 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
LINC01949-201ENST00000445770 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
LINC01949-201ENST00000445770 ARHGEF10O15013 1369 aa12.28□□□□□ -0.44
LINC01949-201ENST00000445770 RTL1A6NKG5 1358 aa12.28□□□□□ -0.44
LINC01949-201ENST00000445770 PRAMEF22A3QJZ6 481 aa12.28□□□□□ -0.44
LINC01949-201ENST00000445770 INTS3Q68E01 1043 aaKnown RBP12.28□□□□□ -0.44
LINC01949-201ENST00000445770 GCC1Q96CN9 775 aa12.28□□□□□ -0.44
LINC01949-201ENST00000445770 ZC3H6P61129 1189 aaKnown RBP12.27□□□□□ -0.44
LINC01949-201ENST00000445770 USP35Q9P2H5 1018 aa12.27□□□□□ -0.44
LINC01949-201ENST00000445770 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
LINC01949-201ENST00000445770 FLIIQ13045 1269 aa12.27□□□□□ -0.45
LINC01949-201ENST00000445770 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
LINC01949-201ENST00000445770 GAS2L2Q8NHY3 880 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 NALCNQ8IZF0 1738 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 KDRP35968 1356 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 RGPD1P0DJD0 1748 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 CABLES1Q8TDN4 633 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 KIF2CQ99661 725 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 DCTPP1Q9H773 170 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
LINC01949-201ENST00000445770 STK31Q9BXU1 1019 aa12.25□□□□□ -0.45
LINC01949-201ENST00000445770 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
LINC01949-201ENST00000445770 IL1RAPL2Q9NP60 686 aa12.24□□□□□ -0.45
LINC01949-201ENST00000445770 MAP4K4O95819 1239 aaPredicted RBP12.24□□□□□ -0.45
LINC01949-201ENST00000445770 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
LINC01949-201ENST00000445770 LRRFIP2Q9Y608 721 aaKnown RBP12.24□□□□□ -0.45
LINC01949-201ENST00000445770 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
LINC01949-201ENST00000445770 SDSP20132 328 aa12.24□□□□□ -0.45
LINC01949-201ENST00000445770 XRN1Q8IZH2 1706 aaKnown RBP12.23□□□□□ -0.45
LINC01949-201ENST00000445770 PIP4K2AP48426 406 aaPredicted RBP12.23□□□□□ -0.45
LINC01949-201ENST00000445770 CHPF2Q9P2E5 772 aa12.23□□□□□ -0.45
LINC01949-201ENST00000445770 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
LINC01949-201ENST00000445770 KIAA0232Q92628 1395 aa12.23□□□□□ -0.45
LINC01949-201ENST00000445770 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms