RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
SMARCA4-204ENST00000444061 PLA2R1Q13018 1463 aa17.28■□□□□ 0.36
SMARCA4-204ENST00000444061 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
SMARCA4-204ENST00000444061 DIP2CQ9Y2E4 1556 aa17.28■□□□□ 0.36
SMARCA4-204ENST00000444061 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-204ENST00000444061 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.36
SMARCA4-204ENST00000444061 C1orf115Q9H7X2 142 aa17.27■□□□□ 0.36
SMARCA4-204ENST00000444061 SBNO2Q9Y2G9 1366 aa17.27■□□□□ 0.36
SMARCA4-204ENST00000444061 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
SMARCA4-204ENST00000444061 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-204ENST00000444061 KIF1BO60333 1816 aa17.26■□□□□ 0.35
SMARCA4-204ENST00000444061 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-204ENST00000444061 PARD3Q8TEW0 1356 aa17.26■□□□□ 0.35
SMARCA4-204ENST00000444061 IQGAP3Q86VI3 1631 aa17.26■□□□□ 0.35
SMARCA4-204ENST00000444061 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
SMARCA4-204ENST00000444061 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
SMARCA4-204ENST00000444061 PER1O15534 1290 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-204ENST00000444061 DCAF5Q96JK2 942 aa17.25■□□□□ 0.35
SMARCA4-204ENST00000444061 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-204ENST00000444061 ATP6V1AP38606 617 aa17.25■□□□□ 0.35
SMARCA4-204ENST00000444061 MYD88Q99836 296 aa17.25■□□□□ 0.35
SMARCA4-204ENST00000444061 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 GNL3LQ9NVN8 582 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 FAM98CQ17RN3 349 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 RFC4P35249 363 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 SSH1Q8WYL5 1049 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 SIL1Q9H173 461 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 FAM135BQ49AJ0 1406 aa17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-204ENST00000444061 PHF14O94880 888 aa17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 A0A087WZG4 1122 aa17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 AGLP35573 1532 aa17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 TRMT112Q9UI30 125 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
SMARCA4-204ENST00000444061 IL16Q14005 1332 aa17.22■□□□□ 0.35
SMARCA4-204ENST00000444061 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
SMARCA4-204ENST00000444061 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-204ENST00000444061 NFATC2IPQ8NCF5 419 aa17.22■□□□□ 0.35
SMARCA4-204ENST00000444061 DNAAF4Q8WXU2 420 aa17.22■□□□□ 0.35
SMARCA4-204ENST00000444061 CEP126Q9P2H0 1117 aa17.22■□□□□ 0.35
SMARCA4-204ENST00000444061 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.35
SMARCA4-204ENST00000444061 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
SMARCA4-204ENST00000444061 GPTP24298 496 aa17.21■□□□□ 0.35
SMARCA4-204ENST00000444061 SPRYD3Q8NCJ5 442 aa17.21■□□□□ 0.35
SMARCA4-204ENST00000444061 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.35
SMARCA4-204ENST00000444061 REC8O95072 547 aa17.21■□□□□ 0.34
SMARCA4-204ENST00000444061 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-204ENST00000444061 FLIIQ13045 1269 aa17.2■□□□□ 0.34
SMARCA4-204ENST00000444061 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-204ENST00000444061 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-204ENST00000444061 UNC13BO14795 1591 aa17.19■□□□□ 0.34
SMARCA4-204ENST00000444061 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
SMARCA4-204ENST00000444061 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-204ENST00000444061 PTPRMP28827 1452 aa17.19■□□□□ 0.34
SMARCA4-204ENST00000444061 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 F6X3S4 739 aa17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 TRDNQ13061 729 aa17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 TTC39AQ5SRH9 613 aa17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
SMARCA4-204ENST00000444061 BRINP3Q76B58 766 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 INO80Q9ULG1 1556 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 ST18O60284 1047 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 IL13P35225 146 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 PHACTR3Q96KR7 559 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 RAD21O60216 631 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 ANO2Q9NQ90 1003 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 RNMTO43148 476 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
SMARCA4-204ENST00000444061 ANXA1P04083 346 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 FAM161AQ3B820 660 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 ADGRB3O60242 1522 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 TRIM44Q96DX7 344 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 ABCA6Q8N139 1617 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
SMARCA4-204ENST00000444061 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
SMARCA4-204ENST00000444061 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms