RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 FLIIQ13045 1269 aa26.78■■□□□ 1.88
CTDSPL-206ENST00000443503 PTCD1O75127 700 aaKnown RBP26.78■■□□□ 1.88
CTDSPL-206ENST00000443503 ATP2B1P20020 1258 aa26.78■■□□□ 1.88
CTDSPL-206ENST00000443503 TBC1D2Q9BYX2 928 aa26.78■■□□□ 1.88
CTDSPL-206ENST00000443503 CEP126Q9P2H0 1117 aa26.78■■□□□ 1.88
CTDSPL-206ENST00000443503 LRRFIP2Q9Y608 721 aaKnown RBP26.78■■□□□ 1.88
CTDSPL-206ENST00000443503 MEX3CQ5U5Q3 659 aaKnown RBP26.77■■□□□ 1.88
CTDSPL-206ENST00000443503 CCDC85AQ96PX6 553 aaPredicted RBP26.77■■□□□ 1.88
CTDSPL-206ENST00000443503 FKBP4Q02790 459 aaKnown RBP eCLIP26.77■■□□□ 1.88
CTDSPL-206ENST00000443503 RRP12Q5JTH9 1297 aaKnown RBP26.77■■□□□ 1.88
CTDSPL-206ENST00000443503 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.77■■□□□ 1.88
CTDSPL-206ENST00000443503 TTC21BQ7Z4L5 1316 aa26.76■■□□□ 1.87
CTDSPL-206ENST00000443503 WDR7Q9Y4E6 1490 aa26.76■■□□□ 1.87
CTDSPL-206ENST00000443503 LARP1BQ659C4 914 aaKnown RBP26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 TSPY26PQ9H489 355 aa26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 FAM13BQ9NYF5 915 aa26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 KINO60870 393 aaKnown RBP26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 SHANK2Q9UPX8 1470 aa26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 SART3Q15020 963 aaKnown RBP26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 PLEKHH1Q9ULM0 1364 aa26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 ZNF518AQ6AHZ1 1483 aa26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 GLRX3O76003 335 aaKnown RBP26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 AMOTQ4VCS5 1084 aa26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 MTMR7Q9Y216 660 aa26.75■■□□□ 1.87
CTDSPL-206ENST00000443503 ANKRD1Q15327 319 aa26.74■■□□□ 1.87
CTDSPL-206ENST00000443503 HOMER1Q86YM7 354 aa26.74■■□□□ 1.87
CTDSPL-206ENST00000443503 DNAAF4Q8WXU2 420 aa26.74■■□□□ 1.87
CTDSPL-206ENST00000443503 PDRG1Q9NUG6 133 aa26.73■■□□□ 1.87
CTDSPL-206ENST00000443503 POLR3AO14802 1390 aaPredicted RBP26.73■■□□□ 1.87
CTDSPL-206ENST00000443503 NOC3LQ8WTT2 800 aaKnown RBP26.73■■□□□ 1.87
CTDSPL-206ENST00000443503 TRIM34Q9BYJ4 488 aa26.73■■□□□ 1.87
CTDSPL-206ENST00000443503 LARP1Q6PKG0 1096 aaKnown RBP26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 TRIM5Q9C035 493 aa26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 ZRANB1Q9UGI0 708 aa26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 ANKRD20A12PQ8NF67 263 aa26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 GRPEL1Q9HAV7 217 aa26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 PTPRCP08575 1304 aa26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 ARHGEF12Q9NZN5 1544 aa26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 CCDC39Q9UFE4 941 aa26.72■■□□□ 1.87
CTDSPL-206ENST00000443503 TNNQ9UQP3 1299 aa26.71■■□□□ 1.87
CTDSPL-206ENST00000443503 AEBP1Q8IUX7 1158 aa26.71■■□□□ 1.87
CTDSPL-206ENST00000443503 POLKQ9UBT6 870 aa26.71■■□□□ 1.87
CTDSPL-206ENST00000443503 RAB11FIP3O75154 756 aa26.7■■□□□ 1.87
CTDSPL-206ENST00000443503 BMP2KLQ5H9B9 411 aa26.7■■□□□ 1.87
CTDSPL-206ENST00000443503 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.7■■□□□ 1.87
CTDSPL-206ENST00000443503 LETM1O95202 739 aaPredicted RBP26.7■■□□□ 1.87
CTDSPL-206ENST00000443503 FMNL2Q96PY5 1086 aa26.7■■□□□ 1.87
CTDSPL-206ENST00000443503 KRT85P78386 507 aa26.7■■□□□ 1.86
CTDSPL-206ENST00000443503 CCDC47Q96A33 483 aaKnown RBP26.7■■□□□ 1.86
CTDSPL-206ENST00000443503 DNMT1P26358 1616 aaKnown RBP26.7■■□□□ 1.86
CTDSPL-206ENST00000443503 TNRQ92752 1358 aa26.7■■□□□ 1.86
CTDSPL-206ENST00000443503 STK38Q15208 465 aa26.69■■□□□ 1.86
CTDSPL-206ENST00000443503 DBF4Q9UBU7 674 aaPredicted RBP26.69■■□□□ 1.86
CTDSPL-206ENST00000443503 BOLA2Q9H3K6 86 aa26.69■■□□□ 1.86
CTDSPL-206ENST00000443503 MPHOSPH8Q99549 860 aa26.69■■□□□ 1.86
CTDSPL-206ENST00000443503 TPM2P07951 284 aa26.69■■□□□ 1.86
CTDSPL-206ENST00000443503 CASTP20810 708 aaKnown RBP26.69■■□□□ 1.86
CTDSPL-206ENST00000443503 PCMTD1Q96MG8 357 aaPredicted RBP26.69■■□□□ 1.86
CTDSPL-206ENST00000443503 XBP1P17861 261 aa26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 TBC1D9Q6ZT07 1266 aa26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 R3HCC1Q9Y3T6 440 aaKnown RBP26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 NAT10Q9H0A0 1025 aaKnown RBP26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 NUTM2BA6NNL0 878 aaPredicted RBP26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 NUTM2EB1AL46 878 aaPredicted RBP26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 NUTM2AQ8IVF1 878 aaPredicted RBP26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
CTDSPL-206ENST00000443503 MPNDQ8N594 471 aa26.67■■□□□ 1.86
CTDSPL-206ENST00000443503 MYD88Q99836 296 aa26.67■■□□□ 1.86
CTDSPL-206ENST00000443503 KIF21AQ7Z4S6 1674 aa26.67■■□□□ 1.86
CTDSPL-206ENST00000443503 IPO7O95373 1038 aaKnown RBP26.66■■□□□ 1.86
CTDSPL-206ENST00000443503 STK11IPQ8N1F8 1099 aa26.66■■□□□ 1.86
CTDSPL-206ENST00000443503 CCDC173Q0VFZ6 552 aa26.66■■□□□ 1.86
CTDSPL-206ENST00000443503 ANXA1P04083 346 aa26.66■■□□□ 1.86
CTDSPL-206ENST00000443503 RLBP1P12271 317 aa26.66■■□□□ 1.86
CTDSPL-206ENST00000443503 ZSCAN31Q96LW9 406 aaPredicted RBP26.66■■□□□ 1.86
CTDSPL-206ENST00000443503 ZNF396Q96N95 335 aaPredicted RBP26.66■■□□□ 1.86
CTDSPL-206ENST00000443503 HDAC1Q13547 482 aaPredicted RBP26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 C8orf58Q8NAV2 365 aa26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 CCDC8Q9H0W5 538 aaPredicted RBP26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 BRMS1Q9HCU9 246 aa26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 SPINK5Q9NQ38 1064 aaPredicted RBP26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 ABCC10Q5T3U5 1492 aa26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 TEX14Q8IWB6 1497 aa26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 PRPF40BQ6NWY9 871 aaKnown RBP26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 ARHGAP45Q92619 1136 aa26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 TBC1D32Q96NH3 1257 aa26.65■■□□□ 1.86
CTDSPL-206ENST00000443503 PDE4CQ08493 712 aa26.64■■□□□ 1.86
CTDSPL-206ENST00000443503 UHRF1BP1LA0JNW5 1464 aa26.64■■□□□ 1.86
CTDSPL-206ENST00000443503 PI4KAP2A4QPH2 592 aa26.64■■□□□ 1.85
CTDSPL-206ENST00000443503 PI4KAP1Q8N8J0 262 aa26.64■■□□□ 1.85
CTDSPL-206ENST00000443503 MEIS3Q99687 375 aa26.64■■□□□ 1.85
CTDSPL-206ENST00000443503 TSHZ3Q63HK5 1081 aa26.64■■□□□ 1.85
CTDSPL-206ENST00000443503 PIK3C2GO75747 1445 aa26.63■■□□□ 1.85
CTDSPL-206ENST00000443503 PUS7Q96PZ0 661 aaKnown RBP26.63■■□□□ 1.85
CTDSPL-206ENST00000443503 FERMT3Q86UX7 667 aa26.63■■□□□ 1.85
CTDSPL-206ENST00000443503 ME1P48163 572 aa26.62■■□□□ 1.85
CTDSPL-206ENST00000443503 KRT32Q14532 448 aa26.62■■□□□ 1.85
CTDSPL-206ENST00000443503 OLFM4Q6UX06 510 aa26.62■■□□□ 1.85
CTDSPL-206ENST00000443503 GOLGA6L1Q8N7Z2 621 aa26.62■■□□□ 1.85
CTDSPL-206ENST00000443503 UHRF1BP1Q6BDS2 1440 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms