RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 EDC4Q6P2E9 1401 aaKnown RBP18.69■□□□□ 0.58
CHFR-204ENST00000443047 FAM177BA6PVY3 158 aa18.69■□□□□ 0.58
CHFR-204ENST00000443047 ZNF500O60304 480 aaPredicted RBP18.69■□□□□ 0.58
CHFR-204ENST00000443047 CIZ1Q9ULV3 898 aaPredicted RBP18.68■□□□□ 0.58
CHFR-204ENST00000443047 ADAMTS13Q76LX8 1427 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 ACEP12821 1306 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 IGSF3O75054 1194 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 NFE2L2Q16236 605 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 KLHL40Q2TBA0 621 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 SASS6Q6UVJ0 657 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 FAM135BQ49AJ0 1406 aa18.67■□□□□ 0.58
CHFR-204ENST00000443047 PTMSP20962 102 aa18.66■□□□□ 0.58
CHFR-204ENST00000443047 PRIM1P49642 420 aaKnown RBP18.66■□□□□ 0.58
CHFR-204ENST00000443047 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
CHFR-204ENST00000443047 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
CHFR-204ENST00000443047 PPP4R3BQ5MIZ7 849 aa18.66■□□□□ 0.58
CHFR-204ENST00000443047 BAG4O95429 457 aaKnown RBP18.66■□□□□ 0.58
CHFR-204ENST00000443047 PTMAP06454 111 aaKnown RBP18.66■□□□□ 0.58
CHFR-204ENST00000443047 ZSCAN23Q3MJ62 389 aa18.65■□□□□ 0.58
CHFR-204ENST00000443047 RNF214Q8ND24 703 aa18.65■□□□□ 0.58
CHFR-204ENST00000443047 GTF2E1P29083 439 aaPredicted RBP18.64■□□□□ 0.57
CHFR-204ENST00000443047 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
CHFR-204ENST00000443047 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
CHFR-204ENST00000443047 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
CHFR-204ENST00000443047 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
CHFR-204ENST00000443047 UBR1Q8IWV7 1749 aa18.64■□□□□ 0.57
CHFR-204ENST00000443047 SNX21Q969T3 373 aa18.63■□□□□ 0.57
CHFR-204ENST00000443047 AMOTL2Q9Y2J4 779 aa18.63■□□□□ 0.57
CHFR-204ENST00000443047 IL16Q14005 1332 aa18.63■□□□□ 0.57
CHFR-204ENST00000443047 HSP90AB2PQ58FF8 381 aa18.63■□□□□ 0.57
CHFR-204ENST00000443047 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
CHFR-204ENST00000443047 PTPRUQ92729 1446 aa18.63■□□□□ 0.57
CHFR-204ENST00000443047 UTP14CQ5TAP6 766 aaKnown RBP18.63■□□□□ 0.57
CHFR-204ENST00000443047 LNPKQ9C0E8 428 aa18.63■□□□□ 0.57
CHFR-204ENST00000443047 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
CHFR-204ENST00000443047 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
CHFR-204ENST00000443047 SPDYE4A6NLX3 237 aa18.62■□□□□ 0.57
CHFR-204ENST00000443047 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
CHFR-204ENST00000443047 HS1BP3Q53T59 392 aa18.62■□□□□ 0.57
CHFR-204ENST00000443047 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
CHFR-204ENST00000443047 C1orf115Q9H7X2 142 aa18.62■□□□□ 0.57
CHFR-204ENST00000443047 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
CHFR-204ENST00000443047 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
CHFR-204ENST00000443047 K7ELQ4 463 aaPredicted RBP18.61■□□□□ 0.57
CHFR-204ENST00000443047 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
CHFR-204ENST00000443047 EIF4A2Q14240 407 aaKnown RBP18.61■□□□□ 0.57
CHFR-204ENST00000443047 KRT24Q2M2I5 525 aa18.61■□□□□ 0.57
CHFR-204ENST00000443047 TECPR2O15040 1411 aa18.61■□□□□ 0.57
CHFR-204ENST00000443047 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
CHFR-204ENST00000443047 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
CHFR-204ENST00000443047 VGLL3A8MV65 326 aa18.6■□□□□ 0.57
CHFR-204ENST00000443047 PRPF40AO75400 957 aaKnown RBP18.6■□□□□ 0.57
CHFR-204ENST00000443047 RBM25P49756 843 aaKnown RBP18.6■□□□□ 0.57
CHFR-204ENST00000443047 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
CHFR-204ENST00000443047 EID1Q9Y6B2 187 aa18.6■□□□□ 0.57
CHFR-204ENST00000443047 VAMP4O75379 141 aa18.6■□□□□ 0.57
CHFR-204ENST00000443047 NAP1L2Q9ULW6 460 aaPredicted RBP18.59■□□□□ 0.57
CHFR-204ENST00000443047 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
CHFR-204ENST00000443047 SIRT1Q96EB6 747 aa18.58■□□□□ 0.57
CHFR-204ENST00000443047 ZNF445P59923 1031 aa18.58■□□□□ 0.56
CHFR-204ENST00000443047 MCM10Q7L590 875 aa18.58■□□□□ 0.56
CHFR-204ENST00000443047 CHAMP1Q96JM3 812 aa18.58■□□□□ 0.56
CHFR-204ENST00000443047 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.56
CHFR-204ENST00000443047 FOXD4L5Q5VV16 416 aaPredicted RBP18.57■□□□□ 0.56
CHFR-204ENST00000443047 FOXD4L4Q8WXT5 416 aaPredicted RBP18.57■□□□□ 0.56
CHFR-204ENST00000443047 SYCE3A1L190 88 aa18.57■□□□□ 0.56
CHFR-204ENST00000443047 PDLIM2Q96JY6 352 aa18.57■□□□□ 0.56
CHFR-204ENST00000443047 CCDC39Q9UFE4 941 aa18.57■□□□□ 0.56
CHFR-204ENST00000443047 CDK12Q9NYV4 1490 aaPredicted RBP18.57■□□□□ 0.56
CHFR-204ENST00000443047 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
CHFR-204ENST00000443047 PLEKHG1Q9ULL1 1385 aa18.57■□□□□ 0.56
CHFR-204ENST00000443047 ATP2B3Q16720 1220 aa18.57■□□□□ 0.56
CHFR-204ENST00000443047 ZNF830Q96NB3 372 aaPredicted RBP18.56■□□□□ 0.56
CHFR-204ENST00000443047 ZBTB40Q9NUA8 1239 aa18.56■□□□□ 0.56
CHFR-204ENST00000443047 PKP1Q13835 747 aa18.56■□□□□ 0.56
CHFR-204ENST00000443047 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
CHFR-204ENST00000443047 KIF2CQ99661 725 aa18.56■□□□□ 0.56
CHFR-204ENST00000443047 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
CHFR-204ENST00000443047 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
CHFR-204ENST00000443047 MIS18AQ9NYP9 233 aa18.55■□□□□ 0.56
CHFR-204ENST00000443047 IPO8O15397 1037 aaKnown RBP18.55■□□□□ 0.56
CHFR-204ENST00000443047 GNAI1P63096 354 aa18.55■□□□□ 0.56
CHFR-204ENST00000443047 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
CHFR-204ENST00000443047 NGDNQ8NEJ9 315 aaKnown RBP18.55■□□□□ 0.56
CHFR-204ENST00000443047 MON2Q7Z3U7 1717 aa18.55■□□□□ 0.56
CHFR-204ENST00000443047 FOXO3O43524 673 aa18.54■□□□□ 0.56
CHFR-204ENST00000443047 KIAA2012Q0VF49 1180 aa18.54■□□□□ 0.56
CHFR-204ENST00000443047 ZNF710Q8N1W2 664 aa18.54■□□□□ 0.56
CHFR-204ENST00000443047 IFT57Q9NWB7 429 aa18.54■□□□□ 0.56
CHFR-204ENST00000443047 KNDC1Q76NI1 1749 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 C3P01024 1663 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 ZBTB22O15209 634 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 ZNF853P0CG23 659 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 ALDH1L2Q3SY69 923 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 C17orf53Q8N3J3 647 aaPredicted RBP18.53■□□□□ 0.56
CHFR-204ENST00000443047 LMBRD1Q9NUN5 540 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 PLCD3Q8N3E9 789 aa18.53■□□□□ 0.56
CHFR-204ENST00000443047 GTPBP4Q9BZE4 634 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms