RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ARID3AQ99856 593 aa17.41■□□□□ 0.38
MCF2L-218ENST00000442625 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
MCF2L-218ENST00000442625 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
MCF2L-218ENST00000442625 ZSCAN23Q3MJ62 389 aa17.4■□□□□ 0.38
MCF2L-218ENST00000442625 ZSCAN30Q86W11 494 aa17.4■□□□□ 0.38
MCF2L-218ENST00000442625 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
MCF2L-218ENST00000442625 NEO1Q92859 1461 aa17.4■□□□□ 0.38
MCF2L-218ENST00000442625 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
MCF2L-218ENST00000442625 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
MCF2L-218ENST00000442625 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.37
MCF2L-218ENST00000442625 CDC42BPGQ6DT37 1551 aa17.39■□□□□ 0.37
MCF2L-218ENST00000442625 LMBRD1Q9NUN5 540 aa17.39■□□□□ 0.37
MCF2L-218ENST00000442625 FBXO3Q9UK99 471 aa17.39■□□□□ 0.37
MCF2L-218ENST00000442625 MSNP26038 577 aaKnown RBP17.38■□□□□ 0.37
MCF2L-218ENST00000442625 XPCQ01831 940 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-218ENST00000442625 ANP32BQ92688 251 aaKnown RBP17.38■□□□□ 0.37
MCF2L-218ENST00000442625 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
MCF2L-218ENST00000442625 BBXQ8WY36 941 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-218ENST00000442625 R3HCC1Q9Y3T6 440 aaKnown RBP17.38■□□□□ 0.37
MCF2L-218ENST00000442625 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
MCF2L-218ENST00000442625 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
MCF2L-218ENST00000442625 GPT2Q8TD30 523 aa17.37■□□□□ 0.37
MCF2L-218ENST00000442625 USP26Q9BXU7 913 aa17.37■□□□□ 0.37
MCF2L-218ENST00000442625 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
MCF2L-218ENST00000442625 MAP2P11137 1827 aaKnown RBP17.37■□□□□ 0.37
MCF2L-218ENST00000442625 IPO4Q8TEX9 1081 aaKnown RBP17.36■□□□□ 0.37
MCF2L-218ENST00000442625 MLECQ14165 292 aa17.36■□□□□ 0.37
MCF2L-218ENST00000442625 FOXD4L6Q3SYB3 417 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-218ENST00000442625 TTC22Q5TAA0 569 aa17.35■□□□□ 0.37
MCF2L-218ENST00000442625 FOXD4L3Q6VB84 417 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-218ENST00000442625 COG3Q96JB2 828 aa17.35■□□□□ 0.37
MCF2L-218ENST00000442625 ZDHHC9Q9Y397 364 aa17.35■□□□□ 0.37
MCF2L-218ENST00000442625 RIMS2Q9UQ26 1411 aa17.35■□□□□ 0.37
MCF2L-218ENST00000442625 WASLO00401 505 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-218ENST00000442625 TPM2P07951 284 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 SDSP20132 328 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 RABEP1Q15276 862 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 NOL8Q76FK4 1167 aaKnown RBP17.34■□□□□ 0.37
MCF2L-218ENST00000442625 RNF214Q8ND24 703 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.34■□□□□ 0.37
MCF2L-218ENST00000442625 BCCIPQ9P287 314 aaKnown RBP eCLIP17.34■□□□□ 0.37
MCF2L-218ENST00000442625 OFD1O75665 1012 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 CDK11BP21127 795 aaKnown RBP17.34■□□□□ 0.37
MCF2L-218ENST00000442625 MCM10Q7L590 875 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 MPNDQ8N594 471 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 ATP7BP35670 1465 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 PTMSP20962 102 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 TSHZ3Q63HK5 1081 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 FAM13BQ9NYF5 915 aa17.34■□□□□ 0.37
MCF2L-218ENST00000442625 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.36
MCF2L-218ENST00000442625 TPRNQ4KMQ1 711 aa17.33■□□□□ 0.36
MCF2L-218ENST00000442625 CLEC17AQ6ZS10 378 aa17.33■□□□□ 0.36
MCF2L-218ENST00000442625 NUDT16Q96DE0 195 aaKnown RBP17.33■□□□□ 0.36
MCF2L-218ENST00000442625 SYCE3A1L190 88 aa17.33■□□□□ 0.36
MCF2L-218ENST00000442625 CYP2E1P05181 493 aaPredicted RBP17.33■□□□□ 0.36
MCF2L-218ENST00000442625 RICTORQ6R327 1708 aa17.32■□□□□ 0.36
MCF2L-218ENST00000442625 ZNF445P59923 1031 aa17.32■□□□□ 0.36
MCF2L-218ENST00000442625 SULT6B1Q6IMI4 303 aa17.32■□□□□ 0.36
MCF2L-218ENST00000442625 TMEM63CQ9P1W3 806 aa17.32■□□□□ 0.36
MCF2L-218ENST00000442625 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
MCF2L-218ENST00000442625 SOX12O15370 315 aa17.32■□□□□ 0.36
MCF2L-218ENST00000442625 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
MCF2L-218ENST00000442625 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
MCF2L-218ENST00000442625 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
MCF2L-218ENST00000442625 NUCB2P80303 420 aa17.31■□□□□ 0.36
MCF2L-218ENST00000442625 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
MCF2L-218ENST00000442625 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-218ENST00000442625 CPS1P31327 1500 aa17.31■□□□□ 0.36
MCF2L-218ENST00000442625 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-218ENST00000442625 MEIS3Q99687 375 aa17.3■□□□□ 0.36
MCF2L-218ENST00000442625 METP08581 1390 aa17.3■□□□□ 0.36
MCF2L-218ENST00000442625 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
MCF2L-218ENST00000442625 CEP85Q6P2H3 762 aa17.29■□□□□ 0.36
MCF2L-218ENST00000442625 MSH6P52701 1360 aa17.29■□□□□ 0.36
MCF2L-218ENST00000442625 INTS3Q68E01 1043 aaKnown RBP17.29■□□□□ 0.36
MCF2L-218ENST00000442625 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
MCF2L-218ENST00000442625 PDCL3Q9H2J4 239 aa17.28■□□□□ 0.36
MCF2L-218ENST00000442625 EIF4A2Q14240 407 aaKnown RBP17.28■□□□□ 0.36
MCF2L-218ENST00000442625 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
MCF2L-218ENST00000442625 ATP10DQ9P241 1426 aa17.28■□□□□ 0.36
MCF2L-218ENST00000442625 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
MCF2L-218ENST00000442625 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.36
MCF2L-218ENST00000442625 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-218ENST00000442625 AATKQ6ZMQ8 1374 aa17.27■□□□□ 0.35
MCF2L-218ENST00000442625 IBTKQ9P2D0 1353 aaPredicted RBP17.27■□□□□ 0.35
MCF2L-218ENST00000442625 RGS12O14924 1447 aa17.26■□□□□ 0.35
MCF2L-218ENST00000442625 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
MCF2L-218ENST00000442625 JARID2Q92833 1246 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-218ENST00000442625 GDPD2Q9HCC8 539 aa17.26■□□□□ 0.35
MCF2L-218ENST00000442625 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
MCF2L-218ENST00000442625 ST18O60284 1047 aa17.26■□□□□ 0.35
MCF2L-218ENST00000442625 GTF2E1P29083 439 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-218ENST00000442625 NEK4P51957 841 aa17.26■□□□□ 0.35
MCF2L-218ENST00000442625 F6X3S4 739 aa17.25■□□□□ 0.35
MCF2L-218ENST00000442625 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
MCF2L-218ENST00000442625 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
MCF2L-218ENST00000442625 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
MCF2L-218ENST00000442625 UQCRHP07919 91 aa17.25■□□□□ 0.35
MCF2L-218ENST00000442625 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms