RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 LMOD3Q0VAK6 560 aa18.89■□□□□ 0.61
CDC42EP4-202ENST00000439510 RABEP1Q15276 862 aa18.89■□□□□ 0.61
CDC42EP4-202ENST00000439510 DCTPP1Q9H773 170 aa18.89■□□□□ 0.61
CDC42EP4-202ENST00000439510 KDM4FA0A1W2PPD8 638 aa18.89■□□□□ 0.61
CDC42EP4-202ENST00000439510 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
CDC42EP4-202ENST00000439510 CPSF1Q10570 1443 aaKnown RBP18.89■□□□□ 0.61
CDC42EP4-202ENST00000439510 EDC4Q6P2E9 1401 aaKnown RBP18.89■□□□□ 0.61
CDC42EP4-202ENST00000439510 SLIT1O75093 1534 aa18.88■□□□□ 0.61
CDC42EP4-202ENST00000439510 BAG4O95429 457 aaKnown RBP18.88■□□□□ 0.61
CDC42EP4-202ENST00000439510 C8orf58Q8NAV2 365 aa18.88■□□□□ 0.61
CDC42EP4-202ENST00000439510 ARHGAP23Q9P227 1491 aa18.88■□□□□ 0.61
CDC42EP4-202ENST00000439510 ADAMTS13Q76LX8 1427 aa18.88■□□□□ 0.61
CDC42EP4-202ENST00000439510 ELL2O00472 640 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP4-202ENST00000439510 PPP1R9BQ96SB3 815 aa18.87■□□□□ 0.61
CDC42EP4-202ENST00000439510 TTC22Q5TAA0 569 aa18.87■□□□□ 0.61
CDC42EP4-202ENST00000439510 EMILIN1Q9Y6C2 1016 aa18.87■□□□□ 0.61
CDC42EP4-202ENST00000439510 CCDC173Q0VFZ6 552 aa18.87■□□□□ 0.61
CDC42EP4-202ENST00000439510 PLEKHG1Q9ULL1 1385 aa18.86■□□□□ 0.61
CDC42EP4-202ENST00000439510 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
CDC42EP4-202ENST00000439510 ZNF142P52746 1687 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP4-202ENST00000439510 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
CDC42EP4-202ENST00000439510 INTS3Q68E01 1043 aaKnown RBP18.85■□□□□ 0.61
CDC42EP4-202ENST00000439510 CYP2E1P05181 493 aaPredicted RBP18.85■□□□□ 0.61
CDC42EP4-202ENST00000439510 USP26Q9BXU7 913 aa18.85■□□□□ 0.61
CDC42EP4-202ENST00000439510 NUCB2P80303 420 aa18.84■□□□□ 0.61
CDC42EP4-202ENST00000439510 RGS12O14924 1447 aa18.84■□□□□ 0.61
CDC42EP4-202ENST00000439510 NASPP49321 788 aaPredicted RBP18.83■□□□□ 0.61
CDC42EP4-202ENST00000439510 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.61
CDC42EP4-202ENST00000439510 ANKRD44Q8N8A2 993 aa18.83■□□□□ 0.6
CDC42EP4-202ENST00000439510 NRKQ7Z2Y5 1582 aa18.83■□□□□ 0.6
CDC42EP4-202ENST00000439510 ZNF445P59923 1031 aa18.83■□□□□ 0.6
CDC42EP4-202ENST00000439510 ANKLE2Q86XL3 938 aa18.82■□□□□ 0.6
CDC42EP4-202ENST00000439510 RRP9O43818 475 aaKnown RBP18.82■□□□□ 0.6
CDC42EP4-202ENST00000439510 HSPA2P54652 639 aa18.82■□□□□ 0.6
CDC42EP4-202ENST00000439510 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
CDC42EP4-202ENST00000439510 NME9Q86XW9 330 aa18.8■□□□□ 0.6
CDC42EP4-202ENST00000439510 RPAP2Q8IXW5 612 aaPredicted RBP18.8■□□□□ 0.6
CDC42EP4-202ENST00000439510 NCKAP5LQ9HCH0 1330 aa18.8■□□□□ 0.6
CDC42EP4-202ENST00000439510 CWC22Q9HCG8 908 aaKnown RBP18.8■□□□□ 0.6
CDC42EP4-202ENST00000439510 FAM83GA6ND36 823 aa18.79■□□□□ 0.6
CDC42EP4-202ENST00000439510 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
CDC42EP4-202ENST00000439510 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP4-202ENST00000439510 CPS1P31327 1500 aa18.79■□□□□ 0.6
CDC42EP4-202ENST00000439510 LMBRD1Q9NUN5 540 aa18.79■□□□□ 0.6
CDC42EP4-202ENST00000439510 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 HAP1P54257 671 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 ZSCAN30Q86W11 494 aa18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 ANP32BQ92688 251 aaKnown RBP18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 RBM33Q96EV2 1170 aaKnown RBP18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 AMOTL2Q9Y2J4 779 aa18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
CDC42EP4-202ENST00000439510 SDSP20132 328 aa18.77■□□□□ 0.6
CDC42EP4-202ENST00000439510 HSP90AA2PQ14568 343 aaPredicted RBP18.77■□□□□ 0.6
CDC42EP4-202ENST00000439510 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
CDC42EP4-202ENST00000439510 RTL1A6NKG5 1358 aa18.77■□□□□ 0.6
CDC42EP4-202ENST00000439510 WASLO00401 505 aaPredicted RBP18.77■□□□□ 0.6
CDC42EP4-202ENST00000439510 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
CDC42EP4-202ENST00000439510 KIAA0232Q92628 1395 aa18.76■□□□□ 0.59
CDC42EP4-202ENST00000439510 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
CDC42EP4-202ENST00000439510 OTUD7AQ8TE49 926 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP4-202ENST00000439510 TPM2P07951 284 aa18.76■□□□□ 0.59
CDC42EP4-202ENST00000439510 DCTN1Q14203 1278 aa18.76■□□□□ 0.59
CDC42EP4-202ENST00000439510 COG3Q96JB2 828 aa18.76■□□□□ 0.59
CDC42EP4-202ENST00000439510 NUTM2FA1L443 756 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 ST18O60284 1047 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 ZSCAN23Q3MJ62 389 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 KLHL34Q8N239 644 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 MSH6P52701 1360 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 PTPRCP08575 1304 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 PKP1Q13835 747 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
CDC42EP4-202ENST00000439510 RRS1Q15050 365 aaKnown RBP18.74■□□□□ 0.59
CDC42EP4-202ENST00000439510 HS1BP3Q53T59 392 aa18.74■□□□□ 0.59
CDC42EP4-202ENST00000439510 CHL1O00533 1208 aa18.74■□□□□ 0.59
CDC42EP4-202ENST00000439510 REC8O95072 547 aa18.73■□□□□ 0.59
CDC42EP4-202ENST00000439510 CAVIN1Q6NZI2 390 aaKnown RBP18.73■□□□□ 0.59
CDC42EP4-202ENST00000439510 TUBGCP6Q96RT7 1819 aa18.73■□□□□ 0.59
CDC42EP4-202ENST00000439510 KCNA6P17658 529 aa18.73■□□□□ 0.59
CDC42EP4-202ENST00000439510 ZDHHC9Q9Y397 364 aa18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 RGPD1P0DJD0 1748 aa18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 ZGPATQ8N5A5 531 aaKnown RBP18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 PDLIM2Q96JY6 352 aa18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 OSBPL3Q9H4L5 887 aa18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 SMARCA5O60264 1052 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 OFD1O75665 1012 aa18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 NUDT16Q96DE0 195 aaKnown RBP18.71■□□□□ 0.59
CDC42EP4-202ENST00000439510 ERC2O15083 957 aa18.7■□□□□ 0.58
CDC42EP4-202ENST00000439510 KRT24Q2M2I5 525 aa18.7■□□□□ 0.58
CDC42EP4-202ENST00000439510 MEIS3Q99687 375 aa18.7■□□□□ 0.58
CDC42EP4-202ENST00000439510 NPHP4O75161 1426 aaPredicted RBP18.7■□□□□ 0.58
CDC42EP4-202ENST00000439510 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP4-202ENST00000439510 TECPR2O15040 1411 aa18.69■□□□□ 0.58
CDC42EP4-202ENST00000439510 GPT2Q8TD30 523 aa18.69■□□□□ 0.58
CDC42EP4-202ENST00000439510 RBSNQ9H1K0 784 aa18.69■□□□□ 0.58
CDC42EP4-202ENST00000439510 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
CDC42EP4-202ENST00000439510 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
CDC42EP4-202ENST00000439510 MSNP26038 577 aaKnown RBP18.68■□□□□ 0.58
CDC42EP4-202ENST00000439510 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms