RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SASS6Q6UVJ0 657 aa7.59□□□□□ -1.2
BDNF-211ENST00000439476 NECTIN2Q92692 538 aa7.59□□□□□ -1.2
BDNF-211ENST00000439476 FAM135AQ9P2D6 1515 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 MARCH6O60337 910 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 ALDH1L2Q3SY69 923 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 OSCARQ8IYS5 282 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 SYCE3A1L190 88 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 CPLX1O14810 134 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 FCHSD2O94868 740 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 BAG4O95429 457 aaKnown RBP7.58□□□□□ -1.2
BDNF-211ENST00000439476 GNAI3P08754 354 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 C9orf78Q9NZ63 289 aaPredicted RBP7.58□□□□□ -1.2
BDNF-211ENST00000439476 NOM1Q5C9Z4 860 aaKnown RBP7.58□□□□□ -1.2
BDNF-211ENST00000439476 TBC1D9Q6ZT07 1266 aa7.58□□□□□ -1.2
BDNF-211ENST00000439476 IRF6O14896 467 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 G3BP1Q13283 466 aaKnown RBP eCLIP7.57□□□□□ -1.2
BDNF-211ENST00000439476 KLHL40Q2TBA0 621 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 PRAM1Q96QH2 718 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 THUMPD2Q9BTF0 503 aaKnown RBP7.57□□□□□ -1.2
BDNF-211ENST00000439476 ABCC11Q96J66 1382 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 XPCQ01831 940 aaPredicted RBP7.57□□□□□ -1.2
BDNF-211ENST00000439476 SAFBQ15424 915 aaKnown RBP eCLIP7.57□□□□□ -1.2
BDNF-211ENST00000439476 ERCC4Q92889 916 aaPredicted RBP7.57□□□□□ -1.2
BDNF-211ENST00000439476 TSPYL4Q9UJ04 414 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 DMRT2Q9Y5R5 561 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 SSR1P43307 286 aaKnown RBP7.57□□□□□ -1.2
BDNF-211ENST00000439476 RBM25P49756 843 aaKnown RBP7.57□□□□□ -1.2
BDNF-211ENST00000439476 NUCB1Q02818 461 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 TTC5Q8N0Z6 440 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 BICD2Q8TD16 824 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 SNX21Q969T3 373 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 LTV1Q96GA3 475 aaPredicted RBP7.57□□□□□ -1.2
BDNF-211ENST00000439476 NOL10Q9BSC4 688 aaKnown RBP7.57□□□□□ -1.2
BDNF-211ENST00000439476 TOMM22Q9NS69 142 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 CABP1Q9NZU7 370 aa7.57□□□□□ -1.2
BDNF-211ENST00000439476 POLR3AO14802 1390 aaPredicted RBP7.56□□□□□ -1.2
BDNF-211ENST00000439476 ADGRL2O95490 1459 aa7.56□□□□□ -1.2
BDNF-211ENST00000439476 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
BDNF-211ENST00000439476 RPAP2Q8IXW5 612 aaPredicted RBP7.56□□□□□ -1.2
BDNF-211ENST00000439476 FIBPO43427 364 aa7.56□□□□□ -1.2
BDNF-211ENST00000439476 PIP4K2AP48426 406 aaPredicted RBP7.56□□□□□ -1.2
BDNF-211ENST00000439476 AK7Q96M32 723 aa7.56□□□□□ -1.2
BDNF-211ENST00000439476 CARD14Q9BXL6 1004 aa7.56□□□□□ -1.2
BDNF-211ENST00000439476 IFT57Q9NWB7 429 aa7.56□□□□□ -1.2
BDNF-211ENST00000439476 KDM5CP41229 1560 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 SLC4A2P04920 1241 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 ZSCAN20P17040 1043 aaPredicted RBP7.55□□□□□ -1.2
BDNF-211ENST00000439476 SMC5Q8IY18 1101 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 WDR33Q9C0J8 1336 aaKnown RBP7.55□□□□□ -1.2
BDNF-211ENST00000439476 ATP10BO94823 1461 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 TRERF1Q96PN7 1200 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 RBM42Q9BTD8 480 aaKnown RBP7.55□□□□□ -1.2
BDNF-211ENST00000439476 CWC15Q9P013 229 aaKnown RBP7.55□□□□□ -1.2
BDNF-211ENST00000439476 A2MP01023 1474 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 XBP1P17861 261 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 RAB3GAP1Q15042 981 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 HSP90B2PQ58FF3 399 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 HOMER1Q86YM7 354 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 ERC1Q8IUD2 1116 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 CDK19Q9BWU1 502 aa7.55□□□□□ -1.2
BDNF-211ENST00000439476 SHANK2Q9UPX8 1470 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 RPGRIP1LQ68CZ1 1315 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 ERICH2A1L162 156 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 CCDC66A2RUB6 948 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 GNAI2P04899 355 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 EIF2S2P20042 333 aaKnown RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 POLD1P28340 1107 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 MNS1Q8NEH6 495 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 CNTROBQ8N137 903 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 GEMIN8Q9NWZ8 242 aaKnown RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 KIAA0556O60303 1618 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 EIF2AK4Q9P2K8 1649 aaKnown RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 G3V3G9 751 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 DHX16O60231 1041 aaKnown RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 SMARCA5O60264 1052 aaPredicted RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 UBTFL1P0CB47 393 aaPredicted RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 DCAF8Q5TAQ9 597 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 CCDC94Q9BW85 323 aaPredicted RBP7.54□□□□□ -1.2
BDNF-211ENST00000439476 KDM5BQ9UGL1 1544 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 ATAD2Q6PL18 1390 aa7.54□□□□□ -1.2
BDNF-211ENST00000439476 MPHOSPH10O00566 681 aaKnown RBP7.53□□□□□ -1.2
BDNF-211ENST00000439476 ZSCAN23Q3MJ62 389 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 SPC24Q8NBT2 197 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 GAS2L2Q8NHY3 880 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 IL16Q14005 1332 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 SURF6O75683 361 aaKnown RBP7.53□□□□□ -1.2
BDNF-211ENST00000439476 GTF2A1P52655 376 aaPredicted RBP7.53□□□□□ -1.2
BDNF-211ENST00000439476 NBPF20Q3BBV1 942 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 OLFM4Q6UX06 510 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 LRRCC1Q9C099 1032 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 BRMS1Q9HCU9 246 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 RBM27Q9P2N5 1060 aaKnown RBP7.53□□□□□ -1.2
BDNF-211ENST00000439476 MYO6Q9UM54 1294 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 NPC1L1Q9UHC9 1359 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 PES1O00541 588 aaKnown RBP7.53□□□□□ -1.2
BDNF-211ENST00000439476 ANKRD1Q15327 319 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 SULT6B1Q6IMI4 303 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 DENND4BO75064 1496 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms