RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 CNKSR2Q8WXI2 1034 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 PIBF1Q8WXW3 757 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 SECISBP2LQ93073 1101 aaKnown RBP7.37□□□□□ -1.23
BDNF-210ENST00000438929 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.37□□□□□ -1.23
BDNF-210ENST00000438929 TTC22Q5TAA0 569 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 CKAP2LQ8IYA6 745 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 STAC3Q96MF2 364 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 H3BQV1 296 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 FOSBP53539 338 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 IFFO2Q5TF58 517 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 PPP1R1BQ9UD71 204 aaPredicted RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 GPATCH8Q9UKJ3 1502 aaKnown RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 DTNBO60941 627 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 CEBPZQ03701 1054 aaKnown RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 ZNF692Q9BU19 519 aaPredicted RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 TNMDQ9H2S6 317 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 TRMT1Q9NXH9 659 aaKnown RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 ARHGEF12Q9NZN5 1544 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 MNS1Q8NEH6 495 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 DDX54Q8TDD1 881 aaKnown RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 GPS2Q13227 327 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 FKBP5Q13451 457 aaPredicted RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 CCDC186Q7Z3E2 898 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 OTUD7AQ8TE49 926 aaPredicted RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 FMNL2Q96PY5 1086 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 USP26Q9BXU7 913 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 DCTN1Q14203 1278 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 ALDH1L2Q3SY69 923 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 NSFL1CQ9UNZ2 370 aaKnown RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 ATP10BO94823 1461 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 WDR7Q9Y4E6 1490 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 GADD45BO75293 160 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 ZKSCAN1P17029 563 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 GTF2F1P35269 517 aaKnown RBP eCLIP7.34□□□□□ -1.23
BDNF-210ENST00000438929 ZNF526Q8TF50 670 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 TIGD1Q96MW7 591 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 NUP62CLQ9H1M0 184 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 IL1RAPL2Q9NP60 686 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PRDM4Q9UKN5 801 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 ADGRF5Q8IZF2 1346 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 MAGI2Q86UL8 1455 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 SIGLEC1Q9BZZ2 1709 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 TSPOAP1O95153 1857 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 UVSSAQ2YD98 709 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PLEKHM2Q8IWE5 1019 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 ARGLU1Q9NWB6 273 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 ABCC10Q5T3U5 1492 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 POLR3GO15318 223 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 SLC4A2P04920 1241 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PTGS1P23219 599 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PTPN14Q15678 1187 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 MAP3K11Q16584 847 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 SCAF11Q99590 1463 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 POLR3AO14802 1390 aaPredicted RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 KCNA4P22459 653 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 FBLN1P23142 703 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 SF3A1Q15459 793 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 CCDC83Q8IWF9 413 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 RPAP2Q8IXW5 612 aaPredicted RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 GLI2P10070 1586 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 KRT85P78386 507 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 SKIDA1Q1XH10 827 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 UTP14CQ5TAP6 766 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 LARP1BQ659C4 914 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 KRT222Q8N1A0 295 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 CALCOCO1Q9P1Z2 691 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 KDM4AO75164 1064 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 MX1P20591 662 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 TPM4P67936 248 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 TSPYL6Q8N831 410 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 NUTM2FA1L443 756 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ZBTB7BO15156 539 aaPredicted RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 UBE2HP62256 183 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 OGFRQ9NZT2 677 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 CLIP2Q9UDT6 1046 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ASXL2Q76L83 1435 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 DNMT1P26358 1616 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 SURF6O75683 361 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 STK3Q13188 491 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 FEZ1Q99689 392 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 LRRCC1Q9C099 1032 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 A2MP01023 1474 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 MBD5Q9P267 1494 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ABCC11Q96J66 1382 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 STX6O43752 255 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 PDLIM2Q96JY6 352 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 IBTKQ9P2D0 1353 aaPredicted RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 GSPT1P15170 499 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 CWC27Q6UX04 472 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 TFIP11Q9UBB9 837 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
BDNF-210ENST00000438929 SMC2O95347 1197 aa7.31□□□□□ -1.24
BDNF-210ENST00000438929 CASTP20810 708 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms