RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 IL1RAPL2Q9NP60 686 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 DMRT2Q9Y5R5 561 aa9.88□□□□□ -0.83
TMEM39A-202ENST00000438581 APPP05067 770 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 KIF6Q6ZMV9 814 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 EXOC6BQ9Y2D4 811 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 MAP3K19Q56UN5 1328 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 INTS3Q68E01 1043 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 VPS37DQ86XT2 251 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 CEP120Q8N960 986 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 GCC1Q96CN9 775 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 NPHP3Q7Z494 1330 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 ERC2O15083 957 aa9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 POLR3AO14802 1390 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-202ENST00000438581 PLA2R1Q13018 1463 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 GCP02774 474 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 NGLY1Q96IV0 654 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 MAP7D2Q96T17 732 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 SPATA31E1Q6ZUB1 1445 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 SPINK5Q9NQ38 1064 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 CDC45O75419 566 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 ALDH1L2Q3SY69 923 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 DDX17Q92841 729 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 EYA1Q99502 592 aa9.86□□□□□ -0.83
TMEM39A-202ENST00000438581 ZKSCAN1P17029 563 aaPredicted RBP9.85□□□□□ -0.83
TMEM39A-202ENST00000438581 KRT24Q2M2I5 525 aa9.85□□□□□ -0.83
TMEM39A-202ENST00000438581 DNAJC2Q99543 621 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-202ENST00000438581 FAM193AP78312 1265 aa9.85□□□□□ -0.83
TMEM39A-202ENST00000438581 MTHFSDQ2M296 383 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-202ENST00000438581 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
TMEM39A-202ENST00000438581 TMOD3Q9NYL9 352 aa9.85□□□□□ -0.83
TMEM39A-202ENST00000438581 MAP4K4O95819 1239 aaPredicted RBP9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 C8orf58Q8NAV2 365 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 WASHC4Q2M389 1173 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 FAM43AQ8N2R8 423 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 GPATCH11Q8N954 259 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 ZFP91Q96JP5 570 aaPredicted RBP9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 FSD1Q9BTV5 496 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 LRRCC1Q9C099 1032 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 TNNQ9UQP3 1299 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 SLC39A6Q13433 755 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 PTPRTO14522 1441 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 METP08581 1390 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 FLIIQ13045 1269 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 BACH2Q9BYV9 841 aa9.84□□□□□ -0.83
TMEM39A-202ENST00000438581 SMARCA5O60264 1052 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-202ENST00000438581 UBAP1LF5GYI3 381 aa9.83□□□□□ -0.84
TMEM39A-202ENST00000438581 RPAP2Q8IXW5 612 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-202ENST00000438581 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
TMEM39A-202ENST00000438581 EXOC5O00471 708 aa9.83□□□□□ -0.84
TMEM39A-202ENST00000438581 FLT4P35916 1363 aa9.83□□□□□ -0.84
TMEM39A-202ENST00000438581 PRDM15P57071 1507 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 LRRFIP1Q32MZ4 808 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 BICDL1Q6ZP65 573 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 CNPY4Q8N129 248 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 CFAP74Q9C0B2 1584 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 MYD88Q99836 296 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 DBF4Q9UBU7 674 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 CNTROBQ8N137 903 aa9.82□□□□□ -0.84
TMEM39A-202ENST00000438581 PI4KAP2A4QPH2 592 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 STARD3NLO95772 234 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 HOXC9P31274 260 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 ANAPC15P60006 121 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 PI4KAP1Q8N8J0 262 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 DNAAF4Q8WXU2 420 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 IL16Q14005 1332 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 HECW2Q9P2P5 1572 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 IGSF3O75054 1194 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 NUTM1Q86Y26 1132 aa9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 JARID2Q92833 1246 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 LRRFIP2Q9Y608 721 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-202ENST00000438581 ADCY10Q96PN6 1610 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 MAFGO15525 162 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 IGHDP01880 384 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 CCDC57Q2TAC2 916 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 AACSQ86V21 672 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 FMNL2Q96PY5 1086 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 LARP1Q6PKG0 1096 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 CLASP1Q7Z460 1538 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 ATP5J2-PTCD1G3V325 749 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 CCDC27Q2M243 656 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 RNF20Q5VTR2 975 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 FAM184AQ8NB25 1140 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 TRPM2O94759 1503 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 KDM5DQ9BY66 1539 aa9.8□□□□□ -0.84
TMEM39A-202ENST00000438581 ERC1Q8IUD2 1116 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 IL13P35225 146 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 NEK4P51957 841 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 IP6K1Q92551 441 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 PCDHB15Q9Y5E8 787 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 PLEKHG3A1L390 1219 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 H3BQV1 296 aa9.79□□□□□ -0.84
TMEM39A-202ENST00000438581 TOM1O60784 492 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms