RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 HOXC9P31274 260 aa16.63■□□□□ 0.25
SCRN1-207ENST00000434476 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
SCRN1-207ENST00000434476 PTPRCP08575 1304 aa16.63■□□□□ 0.25
SCRN1-207ENST00000434476 ADAMTSL3P82987 1691 aa16.63■□□□□ 0.25
SCRN1-207ENST00000434476 RTL1A6NKG5 1358 aa16.62■□□□□ 0.25
SCRN1-207ENST00000434476 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
SCRN1-207ENST00000434476 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
SCRN1-207ENST00000434476 BABAM1Q9NWV8 329 aa16.61■□□□□ 0.25
SCRN1-207ENST00000434476 BECN1Q14457 450 aa16.61■□□□□ 0.25
SCRN1-207ENST00000434476 TBC1D32Q96NH3 1257 aa16.61■□□□□ 0.25
SCRN1-207ENST00000434476 ADGRL3Q9HAR2 1447 aa16.61■□□□□ 0.25
SCRN1-207ENST00000434476 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
SCRN1-207ENST00000434476 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
SCRN1-207ENST00000434476 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.25
SCRN1-207ENST00000434476 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
SCRN1-207ENST00000434476 FOXO3O43524 673 aa16.58■□□□□ 0.24
SCRN1-207ENST00000434476 KCNH5Q8NCM2 988 aa16.58■□□□□ 0.24
SCRN1-207ENST00000434476 IP6K1Q92551 441 aa16.58■□□□□ 0.24
SCRN1-207ENST00000434476 TSPYL4Q9UJ04 414 aa16.58■□□□□ 0.24
SCRN1-207ENST00000434476 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
SCRN1-207ENST00000434476 PSME1Q06323 249 aa16.57■□□□□ 0.24
SCRN1-207ENST00000434476 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
SCRN1-207ENST00000434476 NUTM2GQ5VZR2 741 aa16.56■□□□□ 0.24
SCRN1-207ENST00000434476 SIRT2Q8IXJ6 389 aa16.56■□□□□ 0.24
SCRN1-207ENST00000434476 RPAP2Q8IXW5 612 aaPredicted RBP16.56■□□□□ 0.24
SCRN1-207ENST00000434476 NWD1Q149M9 1564 aa16.56■□□□□ 0.24
SCRN1-207ENST00000434476 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
SCRN1-207ENST00000434476 ANKRD45Q5TZF3 282 aa16.55■□□□□ 0.24
SCRN1-207ENST00000434476 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
SCRN1-207ENST00000434476 RGS12O14924 1447 aa16.55■□□□□ 0.24
SCRN1-207ENST00000434476 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 BMP2KLQ5H9B9 411 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 ANKRD44Q8N8A2 993 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 DCTPP1Q9H773 170 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 C1orf115Q9H7X2 142 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
SCRN1-207ENST00000434476 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
SCRN1-207ENST00000434476 TAF7Q15545 349 aaPredicted RBP16.53■□□□□ 0.24
SCRN1-207ENST00000434476 MIS18AQ9NYP9 233 aa16.53■□□□□ 0.24
SCRN1-207ENST00000434476 CCT4P50991 539 aaKnown RBP16.52■□□□□ 0.23
SCRN1-207ENST00000434476 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.23
SCRN1-207ENST00000434476 NFAT5O94916 1531 aa16.51■□□□□ 0.23
SCRN1-207ENST00000434476 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
SCRN1-207ENST00000434476 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
SCRN1-207ENST00000434476 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
SCRN1-207ENST00000434476 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
SCRN1-207ENST00000434476 DEKP35659 375 aaKnown RBP16.5■□□□□ 0.23
SCRN1-207ENST00000434476 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
SCRN1-207ENST00000434476 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
SCRN1-207ENST00000434476 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
SCRN1-207ENST00000434476 MSH6P52701 1360 aa16.49■□□□□ 0.23
SCRN1-207ENST00000434476 NFKBIBQ15653 356 aa16.48■□□□□ 0.23
SCRN1-207ENST00000434476 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
SCRN1-207ENST00000434476 MFAP1P55081 439 aaKnown RBP16.48■□□□□ 0.23
SCRN1-207ENST00000434476 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
SCRN1-207ENST00000434476 RBM33Q96EV2 1170 aaKnown RBP16.48■□□□□ 0.23
SCRN1-207ENST00000434476 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
SCRN1-207ENST00000434476 HMMRO75330 724 aa16.47■□□□□ 0.23
SCRN1-207ENST00000434476 RBM25P49756 843 aaKnown RBP16.47■□□□□ 0.23
SCRN1-207ENST00000434476 PROSER2Q86WR7 435 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-207ENST00000434476 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
SCRN1-207ENST00000434476 G2E3Q7L622 706 aa16.46■□□□□ 0.23
SCRN1-207ENST00000434476 ARHGEF25Q86VW2 580 aa16.46■□□□□ 0.23
SCRN1-207ENST00000434476 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
SCRN1-207ENST00000434476 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.22
SCRN1-207ENST00000434476 GCP02774 474 aa16.45■□□□□ 0.22
SCRN1-207ENST00000434476 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
SCRN1-207ENST00000434476 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
SCRN1-207ENST00000434476 ORAI2Q96SN7 254 aa16.45■□□□□ 0.22
SCRN1-207ENST00000434476 MEIS3Q99687 375 aa16.45■□□□□ 0.22
SCRN1-207ENST00000434476 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
SCRN1-207ENST00000434476 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
SCRN1-207ENST00000434476 SLIT3O75094 1523 aa16.45■□□□□ 0.22
SCRN1-207ENST00000434476 MST1RQ04912 1400 aa16.44■□□□□ 0.22
SCRN1-207ENST00000434476 LTN1O94822 1766 aa16.44■□□□□ 0.22
SCRN1-207ENST00000434476 HOXB7P09629 217 aa16.44■□□□□ 0.22
SCRN1-207ENST00000434476 PLEKHM2Q8IWE5 1019 aa16.44■□□□□ 0.22
SCRN1-207ENST00000434476 GNAI3P08754 354 aa16.43■□□□□ 0.22
SCRN1-207ENST00000434476 FLIIQ13045 1269 aa16.43■□□□□ 0.22
SCRN1-207ENST00000434476 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
SCRN1-207ENST00000434476 GNAI2P04899 355 aa16.42■□□□□ 0.22
SCRN1-207ENST00000434476 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
SCRN1-207ENST00000434476 KRT28Q7Z3Y7 464 aa16.42■□□□□ 0.22
SCRN1-207ENST00000434476 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
SCRN1-207ENST00000434476 CDC45O75419 566 aa16.42■□□□□ 0.22
SCRN1-207ENST00000434476 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
SCRN1-207ENST00000434476 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
SCRN1-207ENST00000434476 F6X3S4 739 aa16.41■□□□□ 0.22
SCRN1-207ENST00000434476 SNX21Q969T3 373 aa16.41■□□□□ 0.22
SCRN1-207ENST00000434476 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
SCRN1-207ENST00000434476 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
SCRN1-207ENST00000434476 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-207ENST00000434476 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
SCRN1-207ENST00000434476 TBC1D9Q6ZT07 1266 aa16.4■□□□□ 0.22
SCRN1-207ENST00000434476 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
SCRN1-207ENST00000434476 OVOS2A0A0G2JMS6 1433 aa16.4■□□□□ 0.22
SCRN1-207ENST00000434476 MED1Q15648 1581 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-207ENST00000434476 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms