RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PKD1L3Q7Z443 1732 aa24.87■■□□□ 1.57
HLA-F-220ENST00000434407 TRIM37O94972 964 aa24.87■■□□□ 1.57
HLA-F-220ENST00000434407 TATP17735 454 aaPredicted RBP24.87■■□□□ 1.57
HLA-F-220ENST00000434407 CNGB1Q14028 1251 aaPredicted RBP24.87■■□□□ 1.57
HLA-F-220ENST00000434407 PLEKHG2Q9H7P9 1386 aa24.87■■□□□ 1.57
HLA-F-220ENST00000434407 COL3A1P02461 1466 aaPredicted RBP24.86■■□□□ 1.57
HLA-F-220ENST00000434407 PARD3Q8TEW0 1356 aa24.86■■□□□ 1.57
HLA-F-220ENST00000434407 SF3B2Q13435 895 aaKnown RBP24.86■■□□□ 1.57
HLA-F-220ENST00000434407 PPP2R1AP30153 589 aa24.83■■□□□ 1.57
HLA-F-220ENST00000434407 DEFB132Q7Z7B7 95 aa24.83■■□□□ 1.57
HLA-F-220ENST00000434407 KDRP35968 1356 aa24.82■■□□□ 1.56
HLA-F-220ENST00000434407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.82■■□□□ 1.56
HLA-F-220ENST00000434407 BAG6P46379 1132 aa24.81■■□□□ 1.56
HLA-F-220ENST00000434407 DDX54Q8TDD1 881 aaKnown RBP24.81■■□□□ 1.56
HLA-F-220ENST00000434407 BCL11BQ9C0K0 894 aaPredicted RBP24.81■■□□□ 1.56
HLA-F-220ENST00000434407 NHSQ6T4R5 1651 aa24.81■■□□□ 1.56
HLA-F-220ENST00000434407 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
HLA-F-220ENST00000434407 DIAPH1O60610 1272 aaKnown RBP24.8■■□□□ 1.56
HLA-F-220ENST00000434407 PCDH11XQ9BZA7 1347 aa24.79■■□□□ 1.56
HLA-F-220ENST00000434407 PCDH11YQ9BZA8 1340 aa24.79■■□□□ 1.56
HLA-F-220ENST00000434407 PTF1AQ7RTS3 328 aa24.78■■□□□ 1.56
HLA-F-220ENST00000434407 CYP27B1O15528 508 aa24.77■■□□□ 1.56
HLA-F-220ENST00000434407 APBA3O96018 575 aa24.77■■□□□ 1.56
HLA-F-220ENST00000434407 AEBP1Q8IUX7 1158 aa24.77■■□□□ 1.56
HLA-F-220ENST00000434407 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
HLA-F-220ENST00000434407 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
HLA-F-220ENST00000434407 EN1Q05925 392 aaPredicted RBP24.76■■□□□ 1.55
HLA-F-220ENST00000434407 RALBP1Q15311 655 aa24.76■■□□□ 1.55
HLA-F-220ENST00000434407 SULT6B1Q6IMI4 303 aa24.76■■□□□ 1.55
HLA-F-220ENST00000434407 CAMKK2Q96RR4 588 aa24.76■■□□□ 1.55
HLA-F-220ENST00000434407 SPG7Q9UQ90 795 aa24.76■■□□□ 1.55
HLA-F-220ENST00000434407 KCNQ2O43526 872 aa24.75■■□□□ 1.55
HLA-F-220ENST00000434407 DOT1LQ8TEK3 1739 aa24.75■■□□□ 1.55
HLA-F-220ENST00000434407 CFAP53Q96M91 514 aa24.74■■□□□ 1.55
HLA-F-220ENST00000434407 BTAF1O14981 1849 aa24.73■■□□□ 1.55
HLA-F-220ENST00000434407 PLSCR1O15162 318 aa24.73■■□□□ 1.55
HLA-F-220ENST00000434407 NKX1-1Q15270 411 aaPredicted RBP24.73■■□□□ 1.55
HLA-F-220ENST00000434407 ACSBG1Q96GR2 724 aa24.73■■□□□ 1.55
HLA-F-220ENST00000434407 RREB1Q92766 1687 aa24.72■■□□□ 1.55
HLA-F-220ENST00000434407 EZH2Q15910 746 aaKnown RBP24.7■■□□□ 1.54
HLA-F-220ENST00000434407 AMOTQ4VCS5 1084 aa24.7■■□□□ 1.54
HLA-F-220ENST00000434407 PLEKHO1Q53GL0 409 aaPredicted RBP24.7■■□□□ 1.54
HLA-F-220ENST00000434407 TOGARAM1Q9Y4F4 1720 aa24.69■■□□□ 1.54
HLA-F-220ENST00000434407 ITGB4P16144 1822 aa24.69■■□□□ 1.54
HLA-F-220ENST00000434407 HMOX1P09601 288 aa24.68■■□□□ 1.54
HLA-F-220ENST00000434407 PHKG2P15735 406 aa24.68■■□□□ 1.54
HLA-F-220ENST00000434407 IFNL2Q8IZJ0 200 aa24.68■■□□□ 1.54
HLA-F-220ENST00000434407 PRIM1P49642 420 aaKnown RBP24.67■■□□□ 1.54
HLA-F-220ENST00000434407 NUP188Q5SRE5 1749 aa24.66■■□□□ 1.54
HLA-F-220ENST00000434407 U2SURPO15042 1029 aaKnown RBP24.65■■□□□ 1.54
HLA-F-220ENST00000434407 PRKRIP1Q9H875 184 aaPredicted RBP24.65■■□□□ 1.54
HLA-F-220ENST00000434407 NUDCQ9Y266 331 aa24.65■■□□□ 1.54
HLA-F-220ENST00000434407 PROM2Q8N271 834 aa24.64■■□□□ 1.54
HLA-F-220ENST00000434407 MYBBP1AQ9BQG0 1328 aaKnown RBP24.63■■□□□ 1.53
HLA-F-220ENST00000434407 ZNF530Q6P9A1 599 aaPredicted RBP24.63■■□□□ 1.53
HLA-F-220ENST00000434407 HSP90AB1P08238 724 aaKnown RBP24.61■■□□□ 1.53
HLA-F-220ENST00000434407 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
HLA-F-220ENST00000434407 RSPH6AQ9H0K4 717 aa24.6■■□□□ 1.53
HLA-F-220ENST00000434407 LY75O60449 1722 aa24.6■■□□□ 1.53
HLA-F-220ENST00000434407 VIRMAQ69YN4 1812 aaKnown RBP24.59■■□□□ 1.53
HLA-F-220ENST00000434407 DCAF5Q96JK2 942 aa24.59■■□□□ 1.53
HLA-F-220ENST00000434407 SCN11AQ9UI33 1791 aa24.59■■□□□ 1.53
HLA-F-220ENST00000434407 KDM6AO15550 1401 aaPredicted RBP24.59■■□□□ 1.53
HLA-F-220ENST00000434407 FCHSD2O94868 740 aa24.58■■□□□ 1.53
HLA-F-220ENST00000434407 U2AF1L5P0DN76 240 aaPredicted RBP24.58■■□□□ 1.53
HLA-F-220ENST00000434407 U2AF1Q01081 240 aaKnown RBP eCLIP24.58■■□□□ 1.53
HLA-F-220ENST00000434407 TXNRD1Q16881 649 aa24.58■■□□□ 1.53
HLA-F-220ENST00000434407 MTHFSDQ2M296 383 aaKnown RBP24.57■■□□□ 1.52
HLA-F-220ENST00000434407 AKAP4Q5JQC9 854 aa24.57■■□□□ 1.52
HLA-F-220ENST00000434407 C1orf141Q5JVX7 400 aa24.57■■□□□ 1.52
HLA-F-220ENST00000434407 ERVV-2B6SEH9 535 aa24.56■■□□□ 1.52
HLA-F-220ENST00000434407 PIGBQ92521 554 aa24.56■■□□□ 1.52
HLA-F-220ENST00000434407 ADAMTS7Q9UKP4 1686 aa24.56■■□□□ 1.52
HLA-F-220ENST00000434407 PRKAR2BP31323 418 aa24.55■■□□□ 1.52
HLA-F-220ENST00000434407 MPRIPQ6WCQ1 1025 aa24.55■■□□□ 1.52
HLA-F-220ENST00000434407 PHACTR3Q96KR7 559 aa24.53■■□□□ 1.52
HLA-F-220ENST00000434407 SLC27A3Q5K4L6 730 aa24.52■■□□□ 1.52
HLA-F-220ENST00000434407 TMOD3Q9NYL9 352 aa24.52■■□□□ 1.52
HLA-F-220ENST00000434407 PAPPAQ13219 1627 aa24.52■■□□□ 1.52
HLA-F-220ENST00000434407 GAS2L2Q8NHY3 880 aa24.51■■□□□ 1.51
HLA-F-220ENST00000434407 LRRC4BQ9NT99 713 aa24.51■■□□□ 1.51
HLA-F-220ENST00000434407 NBPF14Q5TI25 921 aa24.5■■□□□ 1.51
HLA-F-220ENST00000434407 SMARCC1Q92922 1105 aaPredicted RBP24.49■■□□□ 1.51
HLA-F-220ENST00000434407 RNMTO43148 476 aaKnown RBP24.48■■□□□ 1.51
HLA-F-220ENST00000434407 MRC1P22897 1456 aa24.48■■□□□ 1.51
HLA-F-220ENST00000434407 MAPK8IP2Q13387 824 aaPredicted RBP24.48■■□□□ 1.51
HLA-F-220ENST00000434407 PALLDQ8WX93 1383 aa24.48■■□□□ 1.51
HLA-F-220ENST00000434407 PLEKHF1Q96S99 279 aa24.48■■□□□ 1.51
HLA-F-220ENST00000434407 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
HLA-F-220ENST00000434407 ANO8Q9HCE9 1232 aaPredicted RBP24.48■■□□□ 1.51
HLA-F-220ENST00000434407 SRCAPQ6ZRS2 3230 aa24.47■■□□□ 1.51
HLA-F-220ENST00000434407 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
HLA-F-220ENST00000434407 TAF1LQ8IZX4 1826 aa24.47■■□□□ 1.51
HLA-F-220ENST00000434407 CABP4P57796 275 aa24.46■■□□□ 1.51
HLA-F-220ENST00000434407 R3HDM1Q15032 1099 aaKnown RBP24.46■■□□□ 1.51
HLA-F-220ENST00000434407 ASAP1Q9ULH1 1129 aa24.46■■□□□ 1.51
HLA-F-220ENST00000434407 GNAT3A8MTJ3 354 aa24.45■■□□□ 1.5
HLA-F-220ENST00000434407 ATG3Q9NT62 314 aa24.45■■□□□ 1.5
HLA-F-220ENST00000434407 DLG5Q8TDM6 1919 aa24.44■■□□□ 1.5
HLA-F-220ENST00000434407 PSDA5PKW4 1024 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms