RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 KIAA1211Q6ZU35 1233 aa18.39■□□□□ 0.53
TMCO3-202ENST00000434316 RGS12O14924 1447 aa18.39■□□□□ 0.53
TMCO3-202ENST00000434316 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
TMCO3-202ENST00000434316 PRPF40AO75400 957 aaKnown RBP18.38■□□□□ 0.53
TMCO3-202ENST00000434316 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
TMCO3-202ENST00000434316 ZDHHC9Q9Y397 364 aa18.38■□□□□ 0.53
TMCO3-202ENST00000434316 MSH6P52701 1360 aa18.38■□□□□ 0.53
TMCO3-202ENST00000434316 MEIS3Q99687 375 aa18.38■□□□□ 0.53
TMCO3-202ENST00000434316 GPT2Q8TD30 523 aa18.37■□□□□ 0.53
TMCO3-202ENST00000434316 NEO1Q92859 1461 aa18.37■□□□□ 0.53
TMCO3-202ENST00000434316 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
TMCO3-202ENST00000434316 EDC4Q6P2E9 1401 aaKnown RBP18.37■□□□□ 0.53
TMCO3-202ENST00000434316 GLIPR1L2Q4G1C9 344 aa18.36■□□□□ 0.53
TMCO3-202ENST00000434316 FOXD4L5Q5VV16 416 aaPredicted RBP18.36■□□□□ 0.53
TMCO3-202ENST00000434316 FOXD4L4Q8WXT5 416 aaPredicted RBP18.36■□□□□ 0.53
TMCO3-202ENST00000434316 CPSF1Q10570 1443 aaKnown RBP18.36■□□□□ 0.53
TMCO3-202ENST00000434316 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
TMCO3-202ENST00000434316 TPM2P07951 284 aa18.36■□□□□ 0.53
TMCO3-202ENST00000434316 RPAP2Q8IXW5 612 aaPredicted RBP18.36■□□□□ 0.53
TMCO3-202ENST00000434316 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
TMCO3-202ENST00000434316 COG3Q96JB2 828 aa18.36■□□□□ 0.53
TMCO3-202ENST00000434316 CPS1P31327 1500 aa18.35■□□□□ 0.53
TMCO3-202ENST00000434316 ST18O60284 1047 aa18.35■□□□□ 0.53
TMCO3-202ENST00000434316 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
TMCO3-202ENST00000434316 MCM10Q7L590 875 aa18.35■□□□□ 0.53
TMCO3-202ENST00000434316 CASC1Q6TDU7 716 aa18.34■□□□□ 0.53
TMCO3-202ENST00000434316 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
TMCO3-202ENST00000434316 AATKQ6ZMQ8 1374 aa18.34■□□□□ 0.53
TMCO3-202ENST00000434316 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
TMCO3-202ENST00000434316 NSFL1CQ9UNZ2 370 aaKnown RBP18.34■□□□□ 0.53
TMCO3-202ENST00000434316 OFD1O75665 1012 aa18.33■□□□□ 0.53
TMCO3-202ENST00000434316 SULT6B1Q6IMI4 303 aa18.33■□□□□ 0.53
TMCO3-202ENST00000434316 RICTORQ6R327 1708 aa18.33■□□□□ 0.52
TMCO3-202ENST00000434316 TMEM63CQ9P1W3 806 aa18.32■□□□□ 0.52
TMCO3-202ENST00000434316 REC8O95072 547 aa18.31■□□□□ 0.52
TMCO3-202ENST00000434316 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
TMCO3-202ENST00000434316 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
TMCO3-202ENST00000434316 DLC1Q96QB1 1528 aa18.31■□□□□ 0.52
TMCO3-202ENST00000434316 ERC2O15083 957 aa18.31■□□□□ 0.52
TMCO3-202ENST00000434316 CHL1O00533 1208 aa18.31■□□□□ 0.52
TMCO3-202ENST00000434316 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.31■□□□□ 0.52
TMCO3-202ENST00000434316 EIF4A2Q14240 407 aaKnown RBP18.3■□□□□ 0.52
TMCO3-202ENST00000434316 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
TMCO3-202ENST00000434316 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
TMCO3-202ENST00000434316 RIMBP3CA6NJZ7 1639 aa18.3■□□□□ 0.52
TMCO3-202ENST00000434316 RIMBP3BA6NNM3 1639 aa18.3■□□□□ 0.52
TMCO3-202ENST00000434316 RIMBP3Q9UFD9 1639 aa18.3■□□□□ 0.52
TMCO3-202ENST00000434316 SYCE3A1L190 88 aa18.29■□□□□ 0.52
TMCO3-202ENST00000434316 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
TMCO3-202ENST00000434316 F6X3S4 739 aa18.29■□□□□ 0.52
TMCO3-202ENST00000434316 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
TMCO3-202ENST00000434316 NEK4P51957 841 aa18.29■□□□□ 0.52
TMCO3-202ENST00000434316 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
TMCO3-202ENST00000434316 PDE1AP54750 535 aa18.28■□□□□ 0.52
TMCO3-202ENST00000434316 XPCQ01831 940 aaPredicted RBP18.28■□□□□ 0.52
TMCO3-202ENST00000434316 G2E3Q7L622 706 aa18.28■□□□□ 0.52
TMCO3-202ENST00000434316 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.28■□□□□ 0.52
TMCO3-202ENST00000434316 TMX3Q96JJ7 454 aa18.28■□□□□ 0.52
TMCO3-202ENST00000434316 NOL7Q9UMY1 257 aaKnown RBP18.27■□□□□ 0.52
TMCO3-202ENST00000434316 R3HCC1Q9Y3T6 440 aaKnown RBP18.27■□□□□ 0.52
TMCO3-202ENST00000434316 PTPRCP08575 1304 aa18.27■□□□□ 0.52
TMCO3-202ENST00000434316 NOL8Q76FK4 1167 aaKnown RBP18.27■□□□□ 0.52
TMCO3-202ENST00000434316 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
TMCO3-202ENST00000434316 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
TMCO3-202ENST00000434316 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
TMCO3-202ENST00000434316 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
TMCO3-202ENST00000434316 A2ML1A8K2U0 1454 aa18.26■□□□□ 0.51
TMCO3-202ENST00000434316 LRSAM1Q6UWE0 723 aa18.26■□□□□ 0.51
TMCO3-202ENST00000434316 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
TMCO3-202ENST00000434316 METP08581 1390 aa18.26■□□□□ 0.51
TMCO3-202ENST00000434316 RBM10P98175 930 aaKnown RBP18.25■□□□□ 0.51
TMCO3-202ENST00000434316 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
TMCO3-202ENST00000434316 RNF214Q8ND24 703 aa18.25■□□□□ 0.51
TMCO3-202ENST00000434316 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
TMCO3-202ENST00000434316 KIAA0232Q92628 1395 aa18.25■□□□□ 0.51
TMCO3-202ENST00000434316 HMMRO75330 724 aa18.24■□□□□ 0.51
TMCO3-202ENST00000434316 HAP1P54257 671 aaPredicted RBP18.24■□□□□ 0.51
TMCO3-202ENST00000434316 OSBPL3Q9H4L5 887 aa18.24■□□□□ 0.51
TMCO3-202ENST00000434316 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
TMCO3-202ENST00000434316 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
TMCO3-202ENST00000434316 SOX12O15370 315 aa18.23■□□□□ 0.51
TMCO3-202ENST00000434316 FOXO3O43524 673 aa18.23■□□□□ 0.51
TMCO3-202ENST00000434316 ZNF500O60304 480 aaPredicted RBP18.23■□□□□ 0.51
TMCO3-202ENST00000434316 FOXD4L6Q3SYB3 417 aaPredicted RBP18.23■□□□□ 0.51
TMCO3-202ENST00000434316 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
TMCO3-202ENST00000434316 FOXD4L3Q6VB84 417 aaPredicted RBP18.23■□□□□ 0.51
TMCO3-202ENST00000434316 ESYT1Q9BSJ8 1104 aa18.22■□□□□ 0.51
TMCO3-202ENST00000434316 PDCL3Q9H2J4 239 aa18.22■□□□□ 0.51
TMCO3-202ENST00000434316 BRD1O95696 1058 aa18.21■□□□□ 0.51
TMCO3-202ENST00000434316 ZKSCAN5Q9Y2L8 839 aa18.21■□□□□ 0.51
TMCO3-202ENST00000434316 CRB1P82279 1406 aa18.21■□□□□ 0.51
TMCO3-202ENST00000434316 C3P01024 1663 aa18.21■□□□□ 0.51
TMCO3-202ENST00000434316 PKNOX2Q96KN3 472 aa18.21■□□□□ 0.51
TMCO3-202ENST00000434316 NRKQ7Z2Y5 1582 aa18.21■□□□□ 0.51
TMCO3-202ENST00000434316 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
TMCO3-202ENST00000434316 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
TMCO3-202ENST00000434316 RILPL2Q969X0 211 aa18.2■□□□□ 0.5
TMCO3-202ENST00000434316 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
TMCO3-202ENST00000434316 GDPD2Q9HCC8 539 aa18.19■□□□□ 0.5
TMCO3-202ENST00000434316 SALL3Q9BXA9 1300 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms