RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 SPHKAPQ2M3C7 1700 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 GFRA3O60609 400 aa10.11□□□□□ -0.79
GTF2A1-202ENST00000434192 CCER1Q8TC90 406 aaPredicted RBP10.11□□□□□ -0.79
GTF2A1-202ENST00000434192 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
GTF2A1-202ENST00000434192 E9PCH4 1651 aa10.11□□□□□ -0.79
GTF2A1-202ENST00000434192 EFCAB6Q5THR3 1501 aa10.11□□□□□ -0.79
GTF2A1-202ENST00000434192 Q3C1V9 767 aa10.1□□□□□ -0.79
GTF2A1-202ENST00000434192 PLA2G2CQ5R387 149 aa10.1□□□□□ -0.79
GTF2A1-202ENST00000434192 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
GTF2A1-202ENST00000434192 LMTK2Q8IWU2 1503 aa10.1□□□□□ -0.79
GTF2A1-202ENST00000434192 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
GTF2A1-202ENST00000434192 TRIM52Q96A61 297 aa10.09□□□□□ -0.79
GTF2A1-202ENST00000434192 FCF1Q9Y324 198 aaKnown RBP10.09□□□□□ -0.79
GTF2A1-202ENST00000434192 KANK1Q14678 1352 aa10.09□□□□□ -0.79
GTF2A1-202ENST00000434192 CEP170BQ9Y4F5 1589 aaPredicted RBP10.09□□□□□ -0.79
GTF2A1-202ENST00000434192 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
GTF2A1-202ENST00000434192 ABCC3O15438 1527 aa10.08□□□□□ -0.8
GTF2A1-202ENST00000434192 Q6ZNB5 142 aa10.08□□□□□ -0.8
GTF2A1-202ENST00000434192 NUP155O75694 1391 aa10.08□□□□□ -0.8
GTF2A1-202ENST00000434192 NPATQ14207 1427 aa10.07□□□□□ -0.8
GTF2A1-202ENST00000434192 UHRF1BP1Q6BDS2 1440 aa10.07□□□□□ -0.8
GTF2A1-202ENST00000434192 SPRYD7Q5W111 196 aa10.07□□□□□ -0.8
GTF2A1-202ENST00000434192 KIF3BO15066 747 aa10.06□□□□□ -0.8
GTF2A1-202ENST00000434192 MSS51Q4VC12 460 aa10.06□□□□□ -0.8
GTF2A1-202ENST00000434192 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
GTF2A1-202ENST00000434192 SYMPKQ92797 1274 aaKnown RBP10.06□□□□□ -0.8
GTF2A1-202ENST00000434192 USB1Q9BQ65 265 aaKnown RBP10.06□□□□□ -0.8
GTF2A1-202ENST00000434192 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
GTF2A1-202ENST00000434192 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
GTF2A1-202ENST00000434192 TRPM2O94759 1503 aa10.05□□□□□ -0.8
GTF2A1-202ENST00000434192 MYO5BQ9ULV0 1848 aa10.05□□□□□ -0.8
GTF2A1-202ENST00000434192 FDX1P10109 184 aa10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 MS4A1P11836 297 aa10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 PDE4DQ08499 809 aa10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 LAPTM4AQ15012 233 aa10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 ZNF598Q86UK7 904 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 UBR1Q8IWV7 1749 aa10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 RPRD2Q5VT52 1461 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-202ENST00000434192 KDM5AP29375 1690 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-202ENST00000434192 NDUFV2P19404 249 aa10.03□□□□□ -0.8
GTF2A1-202ENST00000434192 MPHOSPH9Q99550 1183 aa10.03□□□□□ -0.8
GTF2A1-202ENST00000434192 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-202ENST00000434192 KIF1BO60333 1816 aa10.03□□□□□ -0.8
GTF2A1-202ENST00000434192 SPATA31D1Q6ZQQ2 1576 aa10.02□□□□□ -0.81
GTF2A1-202ENST00000434192 MOXD2PA6NHM9 499 aa10.02□□□□□ -0.81
GTF2A1-202ENST00000434192 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-202ENST00000434192 CEBPAP49715 358 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-202ENST00000434192 PCDHGC3Q9UN70 934 aa10.02□□□□□ -0.81
GTF2A1-202ENST00000434192 ZMYM3Q14202 1370 aa10.01□□□□□ -0.81
GTF2A1-202ENST00000434192 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
GTF2A1-202ENST00000434192 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
GTF2A1-202ENST00000434192 TRIM67Q6ZTA4 783 aa10.01□□□□□ -0.81
GTF2A1-202ENST00000434192 PLA2R1Q13018 1463 aa10□□□□□ -0.81
GTF2A1-202ENST00000434192 MMP16P51512 607 aa10□□□□□ -0.81
GTF2A1-202ENST00000434192 GGT6Q6P531 493 aa10□□□□□ -0.81
GTF2A1-202ENST00000434192 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
GTF2A1-202ENST00000434192 PIK3C2BO00750 1634 aa10□□□□□ -0.81
GTF2A1-202ENST00000434192 ARHGAP31Q2M1Z3 1444 aa9.99□□□□□ -0.81
GTF2A1-202ENST00000434192 A2ML1A8K2U0 1454 aa9.99□□□□□ -0.81
GTF2A1-202ENST00000434192 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
GTF2A1-202ENST00000434192 HSPA2P54652 639 aa9.99□□□□□ -0.81
GTF2A1-202ENST00000434192 SYNMO15061 1565 aa9.99□□□□□ -0.81
GTF2A1-202ENST00000434192 ANKRD30BQ9BXX2 1392 aa9.99□□□□□ -0.81
GTF2A1-202ENST00000434192 NEURL4Q96JN8 1562 aa9.98□□□□□ -0.81
GTF2A1-202ENST00000434192 TNFRSF10AO00220 468 aa9.98□□□□□ -0.81
GTF2A1-202ENST00000434192 ZBTB24O43167 697 aaPredicted RBP9.98□□□□□ -0.81
GTF2A1-202ENST00000434192 DXOO77932 396 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-202ENST00000434192 CCDC24Q8N4L8 307 aa9.98□□□□□ -0.81
GTF2A1-202ENST00000434192 IQGAP1P46940 1657 aa9.98□□□□□ -0.81
GTF2A1-202ENST00000434192 CCDC144AA2RUR9 1427 aa9.98□□□□□ -0.81
GTF2A1-202ENST00000434192 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
GTF2A1-202ENST00000434192 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-202ENST00000434192 RPIAP49247 311 aa9.97□□□□□ -0.81
GTF2A1-202ENST00000434192 FOXC1Q12948 553 aa9.97□□□□□ -0.81
GTF2A1-202ENST00000434192 RETREG3Q86VR2 466 aa9.97□□□□□ -0.81
GTF2A1-202ENST00000434192 WASHC2CQ9Y4E1 1318 aa9.97□□□□□ -0.81
GTF2A1-202ENST00000434192 PTPRTO14522 1441 aa9.96□□□□□ -0.82
GTF2A1-202ENST00000434192 ERVK-7P63135 1459 aa9.96□□□□□ -0.82
GTF2A1-202ENST00000434192 NLRP1Q9C000 1473 aa9.96□□□□□ -0.82
GTF2A1-202ENST00000434192 UGGT1Q9NYU2 1555 aa9.96□□□□□ -0.82
GTF2A1-202ENST00000434192 GDF9O60383 454 aa9.95□□□□□ -0.82
GTF2A1-202ENST00000434192 JUNDP17535 347 aa9.95□□□□□ -0.82
GTF2A1-202ENST00000434192 TONSLQ96HA7 1378 aa9.95□□□□□ -0.82
GTF2A1-202ENST00000434192 ADGRB3O60242 1522 aa9.95□□□□□ -0.82
GTF2A1-202ENST00000434192 NOS1P29475 1434 aa9.94□□□□□ -0.82
GTF2A1-202ENST00000434192 TNRQ92752 1358 aa9.94□□□□□ -0.82
GTF2A1-202ENST00000434192 LCE2BO14633 110 aa9.94□□□□□ -0.82
GTF2A1-202ENST00000434192 DIXDC1Q155Q3 683 aa9.94□□□□□ -0.82
GTF2A1-202ENST00000434192 TRAF7Q6Q0C0 670 aa9.94□□□□□ -0.82
GTF2A1-202ENST00000434192 STRCP1A6NGW2 1772 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 LTBP4Q8N2S1 1624 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 PRR20EP86478 221 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 PRR20CP86479 221 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 PRR20DP86480 221 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 PRR20BP86481 221 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 PRR20AP86496 221 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 PKD2L1Q9P0L9 805 aa9.93□□□□□ -0.82
GTF2A1-202ENST00000434192 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms