RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 NFAT5O94916 1531 aa22.77■■□□□ 1.24
NUP50-209ENST00000432340 USP47Q96K76 1375 aa22.76■■□□□ 1.23
NUP50-209ENST00000432340 NBPF1Q3BBV0 1214 aa22.74■■□□□ 1.23
NUP50-209ENST00000432340 C16orf71Q8IYS4 520 aaPredicted RBP22.74■■□□□ 1.23
NUP50-209ENST00000432340 RBM46Q8TBY0 533 aaKnown RBP22.74■■□□□ 1.23
NUP50-209ENST00000432340 KTN1Q86UP2 1357 aaKnown RBP22.73■■□□□ 1.23
NUP50-209ENST00000432340 USP31Q70CQ4 1352 aa22.71■■□□□ 1.23
NUP50-209ENST00000432340 FSTL1Q12841 308 aa22.7■■□□□ 1.22
NUP50-209ENST00000432340 RAB3GAP2Q9H2M9 1393 aa22.7■■□□□ 1.22
NUP50-209ENST00000432340 KIAA1210Q9ULL0 1709 aa22.69■■□□□ 1.22
NUP50-209ENST00000432340 NSD3Q9BZ95 1437 aa22.68■■□□□ 1.22
NUP50-209ENST00000432340 ZCRB1Q8TBF4 217 aaKnown RBP22.67■■□□□ 1.22
NUP50-209ENST00000432340 NSD2O96028 1365 aa22.65■■□□□ 1.22
NUP50-209ENST00000432340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
NUP50-209ENST00000432340 AK7Q96M32 723 aa22.65■■□□□ 1.22
NUP50-209ENST00000432340 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.22
NUP50-209ENST00000432340 WWC3Q9ULE0 1092 aa22.64■■□□□ 1.21
NUP50-209ENST00000432340 RGPD5Q99666 1765 aa22.63■■□□□ 1.21
NUP50-209ENST00000432340 IP6K1Q92551 441 aa22.63■■□□□ 1.21
NUP50-209ENST00000432340 CGNL1Q0VF96 1302 aa22.61■■□□□ 1.21
NUP50-209ENST00000432340 NMRK2Q9NPI5 230 aa22.61■■□□□ 1.21
NUP50-209ENST00000432340 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
NUP50-209ENST00000432340 KDM2BQ8NHM5 1336 aa22.59■■□□□ 1.21
NUP50-209ENST00000432340 LTV1Q96GA3 475 aaPredicted RBP22.59■■□□□ 1.21
NUP50-209ENST00000432340 PLEKHG2Q9H7P9 1386 aa22.59■■□□□ 1.21
NUP50-209ENST00000432340 TGFB2P61812 414 aa22.58■■□□□ 1.21
NUP50-209ENST00000432340 HDGFL2Q7Z4V5 671 aaPredicted RBP22.58■■□□□ 1.21
NUP50-209ENST00000432340 NME9Q86XW9 330 aa22.58■■□□□ 1.21
NUP50-209ENST00000432340 TUBGCP6Q96RT7 1819 aa22.58■■□□□ 1.21
NUP50-209ENST00000432340 LY75O60449 1722 aa22.57■■□□□ 1.2
NUP50-209ENST00000432340 SLC34A2O95436 690 aa22.57■■□□□ 1.2
NUP50-209ENST00000432340 SSFA2P28290 1259 aa22.57■■□□□ 1.2
NUP50-209ENST00000432340 ARHGAP27Q6ZUM4 889 aa22.57■■□□□ 1.2
NUP50-209ENST00000432340 PALLDQ8WX93 1383 aa22.57■■□□□ 1.2
NUP50-209ENST00000432340 CICQ96RK0 1608 aaPredicted RBP22.57■■□□□ 1.2
NUP50-209ENST00000432340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.56■■□□□ 1.2
NUP50-209ENST00000432340 BCS1LQ9Y276 419 aa22.56■■□□□ 1.2
NUP50-209ENST00000432340 PHF14O94880 888 aa22.54■■□□□ 1.2
NUP50-209ENST00000432340 SMC1BQ8NDV3 1235 aa22.54■■□□□ 1.2
NUP50-209ENST00000432340 HTRA3P83110 453 aa22.53■■□□□ 1.2
NUP50-209ENST00000432340 RAPGEF4Q8WZA2 1011 aa22.53■■□□□ 1.2
NUP50-209ENST00000432340 WDR90Q96KV7 1748 aa22.53■■□□□ 1.2
NUP50-209ENST00000432340 SBNO2Q9Y2G9 1366 aa22.51■■□□□ 1.19
NUP50-209ENST00000432340 AMPHP49418 695 aa22.51■■□□□ 1.19
NUP50-209ENST00000432340 TERF2IPQ9NYB0 399 aa22.51■■□□□ 1.19
NUP50-209ENST00000432340 HSPA1AP0DMV8 641 aaKnown RBP22.5■■□□□ 1.19
NUP50-209ENST00000432340 HSPA1BP0DMV9 641 aaKnown RBP22.5■■□□□ 1.19
NUP50-209ENST00000432340 C10orf71Q711Q0 1435 aa22.49■■□□□ 1.19
NUP50-209ENST00000432340 DOT1LQ8TEK3 1739 aa22.49■■□□□ 1.19
NUP50-209ENST00000432340 C9orf131Q5VYM1 1079 aa22.49■■□□□ 1.19
NUP50-209ENST00000432340 MPRIPQ6WCQ1 1025 aa22.49■■□□□ 1.19
NUP50-209ENST00000432340 PCDH11XQ9BZA7 1347 aa22.49■■□□□ 1.19
NUP50-209ENST00000432340 PCDH11YQ9BZA8 1340 aa22.49■■□□□ 1.19
NUP50-209ENST00000432340 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
NUP50-209ENST00000432340 FCHSD2O94868 740 aa22.48■■□□□ 1.19
NUP50-209ENST00000432340 MMP10P09238 476 aa22.48■■□□□ 1.19
NUP50-209ENST00000432340 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
NUP50-209ENST00000432340 PCDH10Q9P2E7 1040 aa22.48■■□□□ 1.19
NUP50-209ENST00000432340 FAM208AQ9UK61 1670 aaKnown RBP22.47■■□□□ 1.19
NUP50-209ENST00000432340 TATP17735 454 aaPredicted RBP22.46■■□□□ 1.19
NUP50-209ENST00000432340 HOXC9P31274 260 aa22.46■■□□□ 1.19
NUP50-209ENST00000432340 NLGN1Q8N2Q7 840 aa22.46■■□□□ 1.19
NUP50-209ENST00000432340 PXDNLA1KZ92 1463 aa22.46■■□□□ 1.19
NUP50-209ENST00000432340 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
NUP50-209ENST00000432340 CCDC87Q9NVE4 849 aa22.45■■□□□ 1.18
NUP50-209ENST00000432340 C5P01031 1676 aa22.45■■□□□ 1.18
NUP50-209ENST00000432340 MEGF6O75095 1541 aa22.44■■□□□ 1.18
NUP50-209ENST00000432340 COG3Q96JB2 828 aa22.44■■□□□ 1.18
NUP50-209ENST00000432340 SMG6Q86US8 1419 aaKnown RBP22.43■■□□□ 1.18
NUP50-209ENST00000432340 A0A0G2JLW4 131 aa22.43■■□□□ 1.18
NUP50-209ENST00000432340 ROCK2O75116 1388 aaKnown RBP22.42■■□□□ 1.18
NUP50-209ENST00000432340 MAP3K19Q56UN5 1328 aa22.42■■□□□ 1.18
NUP50-209ENST00000432340 GNPATO15228 680 aa22.42■■□□□ 1.18
NUP50-209ENST00000432340 RRAGCQ9HB90 399 aa22.42■■□□□ 1.18
NUP50-209ENST00000432340 LTN1O94822 1766 aa22.42■■□□□ 1.18
NUP50-209ENST00000432340 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
NUP50-209ENST00000432340 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
NUP50-209ENST00000432340 ZC3H4Q9UPT8 1303 aaKnown RBP22.4■■□□□ 1.18
NUP50-209ENST00000432340 LOC102724428A0A0B4J2F2 783 aa22.4■■□□□ 1.18
NUP50-209ENST00000432340 SIK1P57059 783 aa22.4■■□□□ 1.18
NUP50-209ENST00000432340 AMIGO3Q86WK7 504 aa22.4■■□□□ 1.18
NUP50-209ENST00000432340 RNF181Q9P0P0 153 aa22.4■■□□□ 1.18
NUP50-209ENST00000432340 C4BP0C0L5 1744 aa22.4■■□□□ 1.18
NUP50-209ENST00000432340 DPEP1P16444 411 aa22.39■■□□□ 1.17
NUP50-209ENST00000432340 TMF1P82094 1093 aa22.39■■□□□ 1.17
NUP50-209ENST00000432340 PIM2Q9P1W9 311 aa22.39■■□□□ 1.17
NUP50-209ENST00000432340 CD163L1Q9NR16 1453 aa22.38■■□□□ 1.17
NUP50-209ENST00000432340 TRAPPC3LQ5T215 181 aa22.37■■□□□ 1.17
NUP50-209ENST00000432340 NBPF6Q5VWK0 638 aa22.37■■□□□ 1.17
NUP50-209ENST00000432340 NBPF4Q96M43 638 aa22.37■■□□□ 1.17
NUP50-209ENST00000432340 PARP3Q9Y6F1 533 aa22.37■■□□□ 1.17
NUP50-209ENST00000432340 KCPQ6ZWJ8 1503 aa22.36■■□□□ 1.17
NUP50-209ENST00000432340 ADRA2BP18089 450 aa22.36■■□□□ 1.17
NUP50-209ENST00000432340 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
NUP50-209ENST00000432340 SLC12A5Q9H2X9 1139 aa22.36■■□□□ 1.17
NUP50-209ENST00000432340 VEGFAP15692 232 aaPredicted RBP22.35■■□□□ 1.17
NUP50-209ENST00000432340 LINC00116Q8NCU8 138 aa22.35■■□□□ 1.17
NUP50-209ENST00000432340 RTCBQ9Y3I0 505 aaKnown RBP22.35■■□□□ 1.17
NUP50-209ENST00000432340 PIGBQ92521 554 aa22.34■■□□□ 1.17
NUP50-209ENST00000432340 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms