RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
LINC00839-202ENST00000429940 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
LINC00839-202ENST00000429940 GSPT1P15170 499 aaKnown RBP18.61■□□□□ 0.57
LINC00839-202ENST00000429940 SSFA2P28290 1259 aa18.61■□□□□ 0.57
LINC00839-202ENST00000429940 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
LINC00839-202ENST00000429940 DLC1Q96QB1 1528 aa18.61■□□□□ 0.57
LINC00839-202ENST00000429940 ESPNB1AK53 854 aa18.61■□□□□ 0.57
LINC00839-202ENST00000429940 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
LINC00839-202ENST00000429940 TRIM44Q96DX7 344 aaPredicted RBP18.6■□□□□ 0.57
LINC00839-202ENST00000429940 EDC4Q6P2E9 1401 aaKnown RBP18.6■□□□□ 0.57
LINC00839-202ENST00000429940 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
LINC00839-202ENST00000429940 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
LINC00839-202ENST00000429940 NPHP4O75161 1426 aaPredicted RBP18.59■□□□□ 0.57
LINC00839-202ENST00000429940 NME9Q86XW9 330 aa18.59■□□□□ 0.57
LINC00839-202ENST00000429940 FAM83GA6ND36 823 aa18.58■□□□□ 0.56
LINC00839-202ENST00000429940 TECPR2O15040 1411 aa18.58■□□□□ 0.56
LINC00839-202ENST00000429940 CPSF1Q10570 1443 aaKnown RBP18.58■□□□□ 0.56
LINC00839-202ENST00000429940 ERBB4Q15303 1308 aa18.58■□□□□ 0.56
LINC00839-202ENST00000429940 DCTPP1Q9H773 170 aa18.58■□□□□ 0.56
LINC00839-202ENST00000429940 RABEP1Q15276 862 aa18.57■□□□□ 0.56
LINC00839-202ENST00000429940 TTC22Q5TAA0 569 aa18.57■□□□□ 0.56
LINC00839-202ENST00000429940 CLEC17AQ6ZS10 378 aa18.57■□□□□ 0.56
LINC00839-202ENST00000429940 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
LINC00839-202ENST00000429940 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
LINC00839-202ENST00000429940 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.56■□□□□ 0.56
LINC00839-202ENST00000429940 CPS1P31327 1500 aa18.56■□□□□ 0.56
LINC00839-202ENST00000429940 LMTK3Q96Q04 1460 aa18.56■□□□□ 0.56
LINC00839-202ENST00000429940 BAG4O95429 457 aaKnown RBP18.56■□□□□ 0.56
LINC00839-202ENST00000429940 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
LINC00839-202ENST00000429940 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
LINC00839-202ENST00000429940 WASLO00401 505 aaPredicted RBP18.55■□□□□ 0.56
LINC00839-202ENST00000429940 INTS3Q68E01 1043 aaKnown RBP18.54■□□□□ 0.56
LINC00839-202ENST00000429940 RRS1Q15050 365 aaKnown RBP18.54■□□□□ 0.56
LINC00839-202ENST00000429940 KLHL40Q2TBA0 621 aa18.54■□□□□ 0.56
LINC00839-202ENST00000429940 C16orf71Q8IYS4 520 aaPredicted RBP18.54■□□□□ 0.56
LINC00839-202ENST00000429940 SIRT1Q96EB6 747 aa18.54■□□□□ 0.56
LINC00839-202ENST00000429940 COG3Q96JB2 828 aa18.54■□□□□ 0.56
LINC00839-202ENST00000429940 DDX49Q9Y6V7 483 aaKnown RBP18.54■□□□□ 0.56
LINC00839-202ENST00000429940 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
LINC00839-202ENST00000429940 ANKRD44Q8N8A2 993 aa18.53■□□□□ 0.56
LINC00839-202ENST00000429940 USP26Q9BXU7 913 aa18.53■□□□□ 0.56
LINC00839-202ENST00000429940 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
LINC00839-202ENST00000429940 ATP10DQ9P241 1426 aa18.52■□□□□ 0.56
LINC00839-202ENST00000429940 IBTKQ9P2D0 1353 aaPredicted RBP18.52■□□□□ 0.56
LINC00839-202ENST00000429940 AK9Q5TCS8 1911 aa18.52■□□□□ 0.55
LINC00839-202ENST00000429940 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
LINC00839-202ENST00000429940 NUCB2P80303 420 aa18.51■□□□□ 0.55
LINC00839-202ENST00000429940 CCDC173Q0VFZ6 552 aa18.51■□□□□ 0.55
LINC00839-202ENST00000429940 XRN1Q8IZH2 1706 aaKnown RBP18.51■□□□□ 0.55
LINC00839-202ENST00000429940 RPAP2Q8IXW5 612 aaPredicted RBP18.51■□□□□ 0.55
LINC00839-202ENST00000429940 MCTP1Q6DN14 999 aa18.5■□□□□ 0.55
LINC00839-202ENST00000429940 CASC1Q6TDU7 716 aa18.5■□□□□ 0.55
LINC00839-202ENST00000429940 OTUD7AQ8TE49 926 aaPredicted RBP18.5■□□□□ 0.55
LINC00839-202ENST00000429940 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
LINC00839-202ENST00000429940 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
LINC00839-202ENST00000429940 RGS12O14924 1447 aa18.5■□□□□ 0.55
LINC00839-202ENST00000429940 PRR36Q9H6K5 1346 aa18.5■□□□□ 0.55
LINC00839-202ENST00000429940 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
LINC00839-202ENST00000429940 CEP85Q6P2H3 762 aa18.49■□□□□ 0.55
LINC00839-202ENST00000429940 SDSP20132 328 aa18.49■□□□□ 0.55
LINC00839-202ENST00000429940 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
LINC00839-202ENST00000429940 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
LINC00839-202ENST00000429940 MSH6P52701 1360 aa18.48■□□□□ 0.55
LINC00839-202ENST00000429940 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
LINC00839-202ENST00000429940 STRCQ7RTU9 1775 aa18.47■□□□□ 0.55
LINC00839-202ENST00000429940 APBB1O00213 710 aa18.47■□□□□ 0.55
LINC00839-202ENST00000429940 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
LINC00839-202ENST00000429940 CYP2E1P05181 493 aaPredicted RBP18.47■□□□□ 0.55
LINC00839-202ENST00000429940 RTL1A6NKG5 1358 aa18.47■□□□□ 0.55
LINC00839-202ENST00000429940 ST18O60284 1047 aa18.47■□□□□ 0.55
LINC00839-202ENST00000429940 NRKQ7Z2Y5 1582 aa18.47■□□□□ 0.55
LINC00839-202ENST00000429940 AEBP1Q8IUX7 1158 aa18.46■□□□□ 0.55
LINC00839-202ENST00000429940 CWC22Q9HCG8 908 aaKnown RBP18.46■□□□□ 0.55
LINC00839-202ENST00000429940 NCLP19338 710 aaKnown RBP18.46■□□□□ 0.54
LINC00839-202ENST00000429940 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.54
LINC00839-202ENST00000429940 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.54
LINC00839-202ENST00000429940 PTPRCP08575 1304 aa18.45■□□□□ 0.54
LINC00839-202ENST00000429940 ITSN1Q15811 1721 aa18.45■□□□□ 0.54
LINC00839-202ENST00000429940 AKAP12Q02952 1782 aa18.45■□□□□ 0.54
LINC00839-202ENST00000429940 CHL1O00533 1208 aa18.45■□□□□ 0.54
LINC00839-202ENST00000429940 ZNF445P59923 1031 aa18.45■□□□□ 0.54
LINC00839-202ENST00000429940 PKP1Q13835 747 aa18.45■□□□□ 0.54
LINC00839-202ENST00000429940 LMBRD1Q9NUN5 540 aa18.45■□□□□ 0.54
LINC00839-202ENST00000429940 CAVIN1Q6NZI2 390 aaKnown RBP18.44■□□□□ 0.54
LINC00839-202ENST00000429940 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
LINC00839-202ENST00000429940 MEIS3Q99687 375 aa18.44■□□□□ 0.54
LINC00839-202ENST00000429940 REC8O95072 547 aa18.44■□□□□ 0.54
LINC00839-202ENST00000429940 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
LINC00839-202ENST00000429940 MCM10Q7L590 875 aa18.44■□□□□ 0.54
LINC00839-202ENST00000429940 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
LINC00839-202ENST00000429940 KIAA0232Q92628 1395 aa18.44■□□□□ 0.54
LINC00839-202ENST00000429940 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
LINC00839-202ENST00000429940 ZSCAN23Q3MJ62 389 aa18.43■□□□□ 0.54
LINC00839-202ENST00000429940 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
LINC00839-202ENST00000429940 STRCP1A6NGW2 1772 aa18.42■□□□□ 0.54
LINC00839-202ENST00000429940 ZSCAN30Q86W11 494 aa18.42■□□□□ 0.54
LINC00839-202ENST00000429940 ERC2O15083 957 aa18.41■□□□□ 0.54
LINC00839-202ENST00000429940 HSP90AA2PQ14568 343 aaPredicted RBP18.4■□□□□ 0.54
LINC00839-202ENST00000429940 RRP9O43818 475 aaKnown RBP18.4■□□□□ 0.54
LINC00839-202ENST00000429940 HMMRO75330 724 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms