RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
SNRNP200-202ENST00000429650 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
SNRNP200-202ENST00000429650 PLEKHM2Q8IWE5 1019 aa16.57■□□□□ 0.24
SNRNP200-202ENST00000429650 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
SNRNP200-202ENST00000429650 KIAA0232Q92628 1395 aa16.57■□□□□ 0.24
SNRNP200-202ENST00000429650 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 DDX11L8A8MPP1 907 aa16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 MCM10Q7L590 875 aa16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 USP6P35125 1406 aa16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 FAM43AQ8N2R8 423 aa16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 GZF1Q9H116 711 aaPredicted RBP16.56■□□□□ 0.24
SNRNP200-202ENST00000429650 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
SNRNP200-202ENST00000429650 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
SNRNP200-202ENST00000429650 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
SNRNP200-202ENST00000429650 USP31Q70CQ4 1352 aa16.54■□□□□ 0.24
SNRNP200-202ENST00000429650 KIF13AQ9H1H9 1805 aa16.54■□□□□ 0.24
SNRNP200-202ENST00000429650 MSH6P52701 1360 aa16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 TNPO1Q92973 898 aaKnown RBP16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 K7ELQ4 463 aaPredicted RBP16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 TTC22Q5TAA0 569 aa16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 CRB1P82279 1406 aa16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 PTPRCP08575 1304 aa16.53■□□□□ 0.24
SNRNP200-202ENST00000429650 PLEKHG1Q9ULL1 1385 aa16.52■□□□□ 0.24
SNRNP200-202ENST00000429650 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.24
SNRNP200-202ENST00000429650 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
SNRNP200-202ENST00000429650 RTL1A6NKG5 1358 aa16.52■□□□□ 0.23
SNRNP200-202ENST00000429650 SOX12O15370 315 aa16.51■□□□□ 0.23
SNRNP200-202ENST00000429650 LTKP29376 864 aa16.51■□□□□ 0.23
SNRNP200-202ENST00000429650 SSH2Q76I76 1423 aa16.51■□□□□ 0.23
SNRNP200-202ENST00000429650 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
SNRNP200-202ENST00000429650 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
SNRNP200-202ENST00000429650 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
SNRNP200-202ENST00000429650 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
SNRNP200-202ENST00000429650 PTPRUQ92729 1446 aa16.5■□□□□ 0.23
SNRNP200-202ENST00000429650 HSP90AA1P07900 732 aaKnown RBP16.5■□□□□ 0.23
SNRNP200-202ENST00000429650 MEIS3Q99687 375 aa16.5■□□□□ 0.23
SNRNP200-202ENST00000429650 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
SNRNP200-202ENST00000429650 GBP4Q96PP9 640 aa16.49■□□□□ 0.23
SNRNP200-202ENST00000429650 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
SNRNP200-202ENST00000429650 MAP3K19Q56UN5 1328 aa16.49■□□□□ 0.23
SNRNP200-202ENST00000429650 FGD1P98174 961 aa16.49■□□□□ 0.23
SNRNP200-202ENST00000429650 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
SNRNP200-202ENST00000429650 RIMS1Q86UR5 1692 aaKnown RBP16.48■□□□□ 0.23
SNRNP200-202ENST00000429650 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
SNRNP200-202ENST00000429650 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
SNRNP200-202ENST00000429650 FOXO3O43524 673 aa16.47■□□□□ 0.23
SNRNP200-202ENST00000429650 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
SNRNP200-202ENST00000429650 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
SNRNP200-202ENST00000429650 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
SNRNP200-202ENST00000429650 SMARCA5O60264 1052 aaPredicted RBP16.47■□□□□ 0.23
SNRNP200-202ENST00000429650 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
SNRNP200-202ENST00000429650 FLT4P35916 1363 aa16.46■□□□□ 0.23
SNRNP200-202ENST00000429650 RABEP1Q15276 862 aa16.46■□□□□ 0.23
SNRNP200-202ENST00000429650 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
SNRNP200-202ENST00000429650 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
SNRNP200-202ENST00000429650 KDRP35968 1356 aa16.46■□□□□ 0.23
SNRNP200-202ENST00000429650 MRE11P49959 708 aa16.46■□□□□ 0.22
SNRNP200-202ENST00000429650 SDSP20132 328 aa16.45■□□□□ 0.22
SNRNP200-202ENST00000429650 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
SNRNP200-202ENST00000429650 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
SNRNP200-202ENST00000429650 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
SNRNP200-202ENST00000429650 APBB1O00213 710 aa16.45■□□□□ 0.22
SNRNP200-202ENST00000429650 G2E3Q7L622 706 aa16.45■□□□□ 0.22
SNRNP200-202ENST00000429650 RRAGDQ9NQL2 400 aaPredicted RBP16.44■□□□□ 0.22
SNRNP200-202ENST00000429650 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
SNRNP200-202ENST00000429650 CEP170BQ9Y4F5 1589 aaPredicted RBP16.44■□□□□ 0.22
SNRNP200-202ENST00000429650 PTMSP20962 102 aa16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 AMOTL2Q9Y2J4 779 aa16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 IGSF1Q8N6C5 1336 aa16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 F6X3S4 739 aa16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 SSFA2P28290 1259 aa16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 SKOR2Q2VWA4 1001 aaPredicted RBP16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
SNRNP200-202ENST00000429650 HMMRO75330 724 aa16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 EYA1Q99502 592 aa16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 CASC1Q6TDU7 716 aa16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 CLEC17AQ6ZS10 378 aa16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 EID1Q9Y6B2 187 aa16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
SNRNP200-202ENST00000429650 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
SNRNP200-202ENST00000429650 AMPHP49418 695 aa16.41■□□□□ 0.22
SNRNP200-202ENST00000429650 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
SNRNP200-202ENST00000429650 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
SNRNP200-202ENST00000429650 LRRC37A3O60309 1634 aa16.4■□□□□ 0.22
SNRNP200-202ENST00000429650 SLIT1O75093 1534 aa16.4■□□□□ 0.22
SNRNP200-202ENST00000429650 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
SNRNP200-202ENST00000429650 C14orf37Q86TY3 774 aa16.39■□□□□ 0.21
SNRNP200-202ENST00000429650 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
SNRNP200-202ENST00000429650 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms