RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
SENP3-202ENST00000429205 CLCN1P35523 988 aa17.04■□□□□ 0.32
SENP3-202ENST00000429205 ANP32BQ92688 251 aaKnown RBP17.04■□□□□ 0.32
SENP3-202ENST00000429205 HOXC9P31274 260 aa17.03■□□□□ 0.32
SENP3-202ENST00000429205 RARSP54136 660 aaKnown RBP17.03■□□□□ 0.32
SENP3-202ENST00000429205 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
SENP3-202ENST00000429205 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
SENP3-202ENST00000429205 HMGB1P09429 215 aaKnown RBP17.02■□□□□ 0.32
SENP3-202ENST00000429205 MST1RQ04912 1400 aa17.02■□□□□ 0.32
SENP3-202ENST00000429205 LMOD2Q6P5Q4 547 aa17.02■□□□□ 0.32
SENP3-202ENST00000429205 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
SENP3-202ENST00000429205 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
SENP3-202ENST00000429205 ARHGEF10O15013 1369 aa17.01■□□□□ 0.31
SENP3-202ENST00000429205 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
SENP3-202ENST00000429205 KRT28Q7Z3Y7 464 aa17.01■□□□□ 0.31
SENP3-202ENST00000429205 EYA1Q99502 592 aa17.01■□□□□ 0.31
SENP3-202ENST00000429205 DCCP43146 1447 aa17.01■□□□□ 0.31
SENP3-202ENST00000429205 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
SENP3-202ENST00000429205 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
SENP3-202ENST00000429205 BCL2L13Q9BXK5 485 aa17■□□□□ 0.31
SENP3-202ENST00000429205 XIRP1Q702N8 1843 aaKnown RBP16.99■□□□□ 0.31
SENP3-202ENST00000429205 MSH6P52701 1360 aa16.99■□□□□ 0.31
SENP3-202ENST00000429205 LTN1O94822 1766 aa16.99■□□□□ 0.31
SENP3-202ENST00000429205 ZBTB7CA1YPR0 619 aa16.99■□□□□ 0.31
SENP3-202ENST00000429205 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
SENP3-202ENST00000429205 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
SENP3-202ENST00000429205 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
SENP3-202ENST00000429205 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
SENP3-202ENST00000429205 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
SENP3-202ENST00000429205 NFAT5O94916 1531 aa16.98■□□□□ 0.31
SENP3-202ENST00000429205 TRPM3Q9HCF6 1732 aaPredicted RBP16.98■□□□□ 0.31
SENP3-202ENST00000429205 LMOD3Q0VAK6 560 aa16.98■□□□□ 0.31
SENP3-202ENST00000429205 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
SENP3-202ENST00000429205 LTV1Q96GA3 475 aaPredicted RBP16.98■□□□□ 0.31
SENP3-202ENST00000429205 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
SENP3-202ENST00000429205 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
SENP3-202ENST00000429205 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
SENP3-202ENST00000429205 KDRP35968 1356 aa16.97■□□□□ 0.31
SENP3-202ENST00000429205 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
SENP3-202ENST00000429205 GCP02774 474 aa16.96■□□□□ 0.31
SENP3-202ENST00000429205 IP6K1Q92551 441 aa16.96■□□□□ 0.31
SENP3-202ENST00000429205 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.31
SENP3-202ENST00000429205 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
SENP3-202ENST00000429205 IFT57Q9NWB7 429 aa16.95■□□□□ 0.3
SENP3-202ENST00000429205 MMP14P50281 582 aa16.94■□□□□ 0.3
SENP3-202ENST00000429205 PDE3AQ14432 1141 aa16.94■□□□□ 0.3
SENP3-202ENST00000429205 USP19O94966 1318 aa16.94■□□□□ 0.3
SENP3-202ENST00000429205 GNAI1P63096 354 aa16.94■□□□□ 0.3
SENP3-202ENST00000429205 TAF3Q5VWG9 929 aa16.94■□□□□ 0.3
SENP3-202ENST00000429205 TMEM51Q9NW97 253 aa16.94■□□□□ 0.3
SENP3-202ENST00000429205 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
SENP3-202ENST00000429205 PANK1Q8TE04 598 aa16.93■□□□□ 0.3
SENP3-202ENST00000429205 MBIPQ9NS73 344 aa16.93■□□□□ 0.3
SENP3-202ENST00000429205 CLGNO14967 610 aa16.93■□□□□ 0.3
SENP3-202ENST00000429205 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
SENP3-202ENST00000429205 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
SENP3-202ENST00000429205 MCM10Q7L590 875 aa16.92■□□□□ 0.3
SENP3-202ENST00000429205 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
SENP3-202ENST00000429205 RRAGDQ9NQL2 400 aaPredicted RBP16.92■□□□□ 0.3
SENP3-202ENST00000429205 TNNQ9UQP3 1299 aa16.92■□□□□ 0.3
SENP3-202ENST00000429205 SLIT3O75094 1523 aa16.92■□□□□ 0.3
SENP3-202ENST00000429205 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
SENP3-202ENST00000429205 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
SENP3-202ENST00000429205 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
SENP3-202ENST00000429205 ALS2Q96Q42 1657 aa16.91■□□□□ 0.3
SENP3-202ENST00000429205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
SENP3-202ENST00000429205 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
SENP3-202ENST00000429205 RLBP1P12271 317 aa16.9■□□□□ 0.3
SENP3-202ENST00000429205 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
SENP3-202ENST00000429205 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.29
SENP3-202ENST00000429205 TICAM2Q86XR7 235 aa16.89■□□□□ 0.29
SENP3-202ENST00000429205 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
SENP3-202ENST00000429205 NBPF4Q96M43 638 aa16.89■□□□□ 0.29
SENP3-202ENST00000429205 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.29
SENP3-202ENST00000429205 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
SENP3-202ENST00000429205 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
SENP3-202ENST00000429205 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
SENP3-202ENST00000429205 VAMP4O75379 141 aa16.88■□□□□ 0.29
SENP3-202ENST00000429205 GRIPAP1Q4V328 841 aa16.88■□□□□ 0.29
SENP3-202ENST00000429205 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
SENP3-202ENST00000429205 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
SENP3-202ENST00000429205 LRRC59Q96AG4 307 aaKnown RBP16.87■□□□□ 0.29
SENP3-202ENST00000429205 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
SENP3-202ENST00000429205 PHRF1Q9P1Y6 1649 aaKnown RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 C8orf58Q8NAV2 365 aa16.86■□□□□ 0.29
SENP3-202ENST00000429205 AXIN2Q9Y2T1 843 aa16.86■□□□□ 0.29
SENP3-202ENST00000429205 CHL1O00533 1208 aa16.86■□□□□ 0.29
SENP3-202ENST00000429205 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 KIF20AO95235 890 aa16.86■□□□□ 0.29
SENP3-202ENST00000429205 TERF1P54274 439 aa16.86■□□□□ 0.29
SENP3-202ENST00000429205 AXDND1Q5T1B0 1012 aaPredicted RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
SENP3-202ENST00000429205 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
SENP3-202ENST00000429205 PXDNQ92626 1479 aa16.86■□□□□ 0.29
SENP3-202ENST00000429205 CRB1P82279 1406 aa16.85■□□□□ 0.29
SENP3-202ENST00000429205 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms