RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
APOBEC3C-202ENST00000428892 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
APOBEC3C-202ENST00000428892 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
APOBEC3C-202ENST00000428892 POLD1P28340 1107 aa15.22■□□□□ 0.03
APOBEC3C-202ENST00000428892 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
APOBEC3C-202ENST00000428892 NME9Q86XW9 330 aa15.21■□□□□ 0.03
APOBEC3C-202ENST00000428892 PUS7Q96PZ0 661 aaKnown RBP15.21■□□□□ 0.03
APOBEC3C-202ENST00000428892 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
APOBEC3C-202ENST00000428892 MAP3K5Q99683 1374 aa15.21■□□□□ 0.02
APOBEC3C-202ENST00000428892 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
APOBEC3C-202ENST00000428892 ZNF827Q17R98 1081 aa15.2■□□□□ 0.02
APOBEC3C-202ENST00000428892 SYTL4Q96C24 671 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3C-202ENST00000428892 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
APOBEC3C-202ENST00000428892 LY75O60449 1722 aa15.2■□□□□ 0.02
APOBEC3C-202ENST00000428892 C1QTNF8P60827 252 aa15.19■□□□□ 0.02
APOBEC3C-202ENST00000428892 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
APOBEC3C-202ENST00000428892 COL24A1Q17RW2 1714 aa15.19■□□□□ 0.02
APOBEC3C-202ENST00000428892 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
APOBEC3C-202ENST00000428892 SLC27A3Q5K4L6 730 aa15.18■□□□□ 0.02
APOBEC3C-202ENST00000428892 SLC16A10Q8TF71 515 aa15.18■□□□□ 0.02
APOBEC3C-202ENST00000428892 GIGYF1O75420 1035 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3C-202ENST00000428892 LTV1Q96GA3 475 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3C-202ENST00000428892 TERF2IPQ9NYB0 399 aa15.17■□□□□ 0.02
APOBEC3C-202ENST00000428892 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
APOBEC3C-202ENST00000428892 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3C-202ENST00000428892 LRRC4BQ9NT99 713 aa15.16■□□□□ 0.02
APOBEC3C-202ENST00000428892 SHANK3Q9BYB0 1731 aa15.16■□□□□ 0.02
APOBEC3C-202ENST00000428892 A0A1W2PP64 1363 aa15.14■□□□□ 0.01
APOBEC3C-202ENST00000428892 C5P01031 1676 aa15.14■□□□□ 0.01
APOBEC3C-202ENST00000428892 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
APOBEC3C-202ENST00000428892 PNPLA7Q6ZV29 1317 aa15.14■□□□□ 0.01
APOBEC3C-202ENST00000428892 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
APOBEC3C-202ENST00000428892 AMPHP49418 695 aa15.12■□□□□ 0.01
APOBEC3C-202ENST00000428892 IP6K1Q92551 441 aa15.12■□□□□ 0.01
APOBEC3C-202ENST00000428892 SLC12A5Q9H2X9 1139 aa15.12■□□□□ 0.01
APOBEC3C-202ENST00000428892 ZEB1P37275 1124 aaPredicted RBP15.11■□□□□ 0.01
APOBEC3C-202ENST00000428892 TMF1P82094 1093 aa15.11■□□□□ 0.01
APOBEC3C-202ENST00000428892 COG3Q96JB2 828 aa15.11■□□□□ 0.01
APOBEC3C-202ENST00000428892 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
APOBEC3C-202ENST00000428892 TAF1LQ8IZX4 1826 aa15.1■□□□□ 0.01
APOBEC3C-202ENST00000428892 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
APOBEC3C-202ENST00000428892 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
APOBEC3C-202ENST00000428892 KCNQ4P56696 695 aa15.1■□□□□ 0.01
APOBEC3C-202ENST00000428892 KIF20BQ96Q89 1820 aa15.09■□□□□ 0.01
APOBEC3C-202ENST00000428892 GRIN3BO60391 1043 aa15.09■□□□□ 0.01
APOBEC3C-202ENST00000428892 NLGN2Q8NFZ4 835 aa15.09■□□□□ 0.01
APOBEC3C-202ENST00000428892 ZCRB1Q8TBF4 217 aaKnown RBP15.08■□□□□ 0
APOBEC3C-202ENST00000428892 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
APOBEC3C-202ENST00000428892 HOXC9P31274 260 aa15.07■□□□□ 0
APOBEC3C-202ENST00000428892 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
APOBEC3C-202ENST00000428892 MEGF6O75095 1541 aa15.07■□□□□ 0
APOBEC3C-202ENST00000428892 ITGB4P16144 1822 aa15.06■□□□□ 0
APOBEC3C-202ENST00000428892 CDCA8Q53HL2 280 aa15.06■□□□□ 0
APOBEC3C-202ENST00000428892 MAP3K19Q56UN5 1328 aa15.06■□□□□ 0
APOBEC3C-202ENST00000428892 RTL1A6NKG5 1358 aa15.06■□□□□ 0
APOBEC3C-202ENST00000428892 GOLGB1Q14789 3259 aaKnown RBP15.05■□□□□ -0
APOBEC3C-202ENST00000428892 HMGB2P26583 209 aaKnown RBP15.05■□□□□ -0
APOBEC3C-202ENST00000428892 MSL1Q68DK7 614 aa15.05■□□□□ -0
APOBEC3C-202ENST00000428892 RAPGEF4Q8WZA2 1011 aa15.05■□□□□ -0
APOBEC3C-202ENST00000428892 NSD2O96028 1365 aa15.05■□□□□ -0
APOBEC3C-202ENST00000428892 CGNL1Q0VF96 1302 aa15.03■□□□□ -0
APOBEC3C-202ENST00000428892 TATP17735 454 aaPredicted RBP15.03■□□□□ -0
APOBEC3C-202ENST00000428892 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
APOBEC3C-202ENST00000428892 YBX3P16989 372 aaKnown RBP eCLIP15.02■□□□□ -06e-11■□□□□ 10.3
APOBEC3C-202ENST00000428892 COL23A1Q86Y22 540 aaPredicted RBP15.02■□□□□ -0
APOBEC3C-202ENST00000428892 C4BP0C0L5 1744 aa15.02□□□□□ -0.01
APOBEC3C-202ENST00000428892 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
APOBEC3C-202ENST00000428892 PCDH11XQ9BZA7 1347 aa15.01□□□□□ -0.01
APOBEC3C-202ENST00000428892 PCDH11YQ9BZA8 1340 aa15.01□□□□□ -0.01
APOBEC3C-202ENST00000428892 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
APOBEC3C-202ENST00000428892 FLAD1Q8NFF5 587 aa15.01□□□□□ -0.01
APOBEC3C-202ENST00000428892 GPBP1L1Q9HC44 474 aaPredicted RBP15.01□□□□□ -0.01
APOBEC3C-202ENST00000428892 UBR3Q6ZT12 1888 aa15.01□□□□□ -0.01
APOBEC3C-202ENST00000428892 FBLN1P23142 703 aa15□□□□□ -0.01
APOBEC3C-202ENST00000428892 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
APOBEC3C-202ENST00000428892 TOGARAM1Q9Y4F4 1720 aa15□□□□□ -0.01
APOBEC3C-202ENST00000428892 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
APOBEC3C-202ENST00000428892 AK7Q96M32 723 aa14.99□□□□□ -0.01
APOBEC3C-202ENST00000428892 PKD1L3Q7Z443 1732 aa14.99□□□□□ -0.01
APOBEC3C-202ENST00000428892 NSD3Q9BZ95 1437 aa14.99□□□□□ -0.01
APOBEC3C-202ENST00000428892 IFFO2Q5TF58 517 aa14.98□□□□□ -0.01
APOBEC3C-202ENST00000428892 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
APOBEC3C-202ENST00000428892 MPRIPQ6WCQ1 1025 aa14.98□□□□□ -0.01
APOBEC3C-202ENST00000428892 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
APOBEC3C-202ENST00000428892 CARD14Q9BXL6 1004 aa14.98□□□□□ -0.01
APOBEC3C-202ENST00000428892 CD2APQ9Y5K6 639 aa14.98□□□□□ -0.01
APOBEC3C-202ENST00000428892 ZNF526Q8TF50 670 aaPredicted RBP14.97□□□□□ -0.01
APOBEC3C-202ENST00000428892 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
APOBEC3C-202ENST00000428892 PHF14O94880 888 aa14.96□□□□□ -0.01
APOBEC3C-202ENST00000428892 SMARCC1Q92922 1105 aaPredicted RBP14.96□□□□□ -0.01
APOBEC3C-202ENST00000428892 FLT4P35916 1363 aa14.96□□□□□ -0.02
APOBEC3C-202ENST00000428892 FYB1O15117 783 aa14.95□□□□□ -0.02
APOBEC3C-202ENST00000428892 ANKRD26Q9UPS8 1709 aa14.95□□□□□ -0.02
APOBEC3C-202ENST00000428892 MAP2P11137 1827 aaKnown RBP14.94□□□□□ -0.02
APOBEC3C-202ENST00000428892 WWC3Q9ULE0 1092 aa14.94□□□□□ -0.02
APOBEC3C-202ENST00000428892 INSRP06213 1382 aa14.94□□□□□ -0.02
APOBEC3C-202ENST00000428892 IGSF1Q8N6C5 1336 aa14.93□□□□□ -0.02
APOBEC3C-202ENST00000428892 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
APOBEC3C-202ENST00000428892 HSP90AB2PQ58FF8 381 aa14.92□□□□□ -0.02
APOBEC3C-202ENST00000428892 KIF24Q5T7B8 1368 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms