RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SENP3Q9H4L4 574 aaPredicted RBP10.94□□□□□ -0.66
CDH13-202ENST00000428848 CCDC61Q9Y6R9 512 aa10.94□□□□□ -0.66
CDH13-202ENST00000428848 MON2Q7Z3U7 1717 aa10.94□□□□□ -0.66
CDH13-202ENST00000428848 AK9Q5TCS8 1911 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 GSPT1P15170 499 aaKnown RBP10.93□□□□□ -0.66
CDH13-202ENST00000428848 TWISTNBQ3B726 338 aaPredicted RBP10.93□□□□□ -0.66
CDH13-202ENST00000428848 PLEKHM2Q8IWE5 1019 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 API5Q9BZZ5 524 aaKnown RBP10.93□□□□□ -0.66
CDH13-202ENST00000428848 DCTPP1Q9H773 170 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 PLEKHG1Q9ULL1 1385 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 SETD1BQ9UPS6 1966 aaKnown RBP10.93□□□□□ -0.66
CDH13-202ENST00000428848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDH13-202ENST00000428848 C8orf58Q8NAV2 365 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 GAS2L2Q8NHY3 880 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 EMILIN1Q9Y6C2 1016 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 METP08581 1390 aa10.93□□□□□ -0.66
CDH13-202ENST00000428848 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
CDH13-202ENST00000428848 C3P01024 1663 aa10.92□□□□□ -0.66
CDH13-202ENST00000428848 TERF1P54274 439 aa10.92□□□□□ -0.66
CDH13-202ENST00000428848 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
CDH13-202ENST00000428848 TXNDC2Q86VQ3 553 aa10.92□□□□□ -0.66
CDH13-202ENST00000428848 NUDT16Q96DE0 195 aaKnown RBP10.92□□□□□ -0.66
CDH13-202ENST00000428848 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
CDH13-202ENST00000428848 AKAP12Q02952 1782 aa10.91□□□□□ -0.66
CDH13-202ENST00000428848 RGS12O14924 1447 aa10.91□□□□□ -0.66
CDH13-202ENST00000428848 ATP10DQ9P241 1426 aa10.91□□□□□ -0.66
CDH13-202ENST00000428848 SSFA2P28290 1259 aa10.91□□□□□ -0.66
CDH13-202ENST00000428848 INTS3Q68E01 1043 aaKnown RBP10.91□□□□□ -0.66
CDH13-202ENST00000428848 NRKQ7Z2Y5 1582 aa10.91□□□□□ -0.66
CDH13-202ENST00000428848 ELL2O00472 640 aaPredicted RBP10.9□□□□□ -0.66
CDH13-202ENST00000428848 CYP2E1P05181 493 aaPredicted RBP10.9□□□□□ -0.66
CDH13-202ENST00000428848 RABEP1Q15276 862 aa10.9□□□□□ -0.66
CDH13-202ENST00000428848 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
CDH13-202ENST00000428848 TTC22Q5TAA0 569 aa10.9□□□□□ -0.66
CDH13-202ENST00000428848 TRIM44Q96DX7 344 aaPredicted RBP10.9□□□□□ -0.66
CDH13-202ENST00000428848 COG3Q96JB2 828 aa10.9□□□□□ -0.66
CDH13-202ENST00000428848 MAP7D2Q96T17 732 aa10.9□□□□□ -0.66
CDH13-202ENST00000428848 KLHL40Q2TBA0 621 aa10.9□□□□□ -0.66
CDH13-202ENST00000428848 CERKQ8TCT0 537 aa10.9□□□□□ -0.66
CDH13-202ENST00000428848 BAG4O95429 457 aaKnown RBP10.89□□□□□ -0.67
CDH13-202ENST00000428848 THEMISQ8N1K5 641 aaPredicted RBP10.89□□□□□ -0.67
CDH13-202ENST00000428848 ANKRD44Q8N8A2 993 aa10.89□□□□□ -0.67
CDH13-202ENST00000428848 PPP1R9BQ96SB3 815 aa10.89□□□□□ -0.67
CDH13-202ENST00000428848 USP26Q9BXU7 913 aa10.89□□□□□ -0.67
CDH13-202ENST00000428848 A0A0U1RQG5 324 aaPredicted RBP10.89□□□□□ -0.67
CDH13-202ENST00000428848 NME9Q86XW9 330 aa10.89□□□□□ -0.67
CDH13-202ENST00000428848 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
CDH13-202ENST00000428848 PRDM4Q9UKN5 801 aa10.89□□□□□ -0.67
CDH13-202ENST00000428848 SLIT1O75093 1534 aa10.89□□□□□ -0.67
CDH13-202ENST00000428848 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
CDH13-202ENST00000428848 ARHGAP23Q9P227 1491 aa10.88□□□□□ -0.67
CDH13-202ENST00000428848 STRCQ7RTU9 1775 aa10.88□□□□□ -0.67
CDH13-202ENST00000428848 FAM83GA6ND36 823 aa10.87□□□□□ -0.67
CDH13-202ENST00000428848 RPAP2Q8IXW5 612 aaPredicted RBP10.87□□□□□ -0.67
CDH13-202ENST00000428848 ITSN1Q15811 1721 aa10.87□□□□□ -0.67
CDH13-202ENST00000428848 GOLGA6L22H0YM25 854 aa10.87□□□□□ -0.67
CDH13-202ENST00000428848 TBX22Q9Y458 520 aa10.87□□□□□ -0.67
CDH13-202ENST00000428848 ADAMTS13Q76LX8 1427 aa10.87□□□□□ -0.67
CDH13-202ENST00000428848 DIP2AQ14689 1571 aa10.87□□□□□ -0.67
CDH13-202ENST00000428848 KIAA0232Q92628 1395 aa10.87□□□□□ -0.67
CDH13-202ENST00000428848 ZNF445P59923 1031 aa10.86□□□□□ -0.67
CDH13-202ENST00000428848 NUCB2P80303 420 aa10.86□□□□□ -0.67
CDH13-202ENST00000428848 CCDC173Q0VFZ6 552 aa10.86□□□□□ -0.67
CDH13-202ENST00000428848 CEP85Q6P2H3 762 aa10.86□□□□□ -0.67
CDH13-202ENST00000428848 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
CDH13-202ENST00000428848 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
CDH13-202ENST00000428848 KIAA1211Q6ZU35 1233 aa10.86□□□□□ -0.67
CDH13-202ENST00000428848 RTL1A6NKG5 1358 aa10.86□□□□□ -0.67
CDH13-202ENST00000428848 RGPD1P0DJD0 1748 aa10.85□□□□□ -0.67
CDH13-202ENST00000428848 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
CDH13-202ENST00000428848 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
CDH13-202ENST00000428848 CHL1O00533 1208 aa10.85□□□□□ -0.67
CDH13-202ENST00000428848 DCTN1Q14203 1278 aa10.85□□□□□ -0.67
CDH13-202ENST00000428848 LMBRD1Q9NUN5 540 aa10.85□□□□□ -0.67
CDH13-202ENST00000428848 SDSP20132 328 aa10.84□□□□□ -0.67
CDH13-202ENST00000428848 RRS1Q15050 365 aaKnown RBP10.84□□□□□ -0.67
CDH13-202ENST00000428848 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.84□□□□□ -0.67
CDH13-202ENST00000428848 OTUD7AQ8TE49 926 aaPredicted RBP10.84□□□□□ -0.67
CDH13-202ENST00000428848 CWC22Q9HCG8 908 aaKnown RBP10.84□□□□□ -0.67
CDH13-202ENST00000428848 DDX49Q9Y6V7 483 aaKnown RBP10.84□□□□□ -0.67
CDH13-202ENST00000428848 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
CDH13-202ENST00000428848 OFD1O75665 1012 aa10.84□□□□□ -0.67
CDH13-202ENST00000428848 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
CDH13-202ENST00000428848 PTPRCP08575 1304 aa10.84□□□□□ -0.67
CDH13-202ENST00000428848 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
CDH13-202ENST00000428848 MSH6P52701 1360 aa10.83□□□□□ -0.68
CDH13-202ENST00000428848 LTKP29376 864 aa10.83□□□□□ -0.68
CDH13-202ENST00000428848 NASPP49321 788 aaPredicted RBP10.83□□□□□ -0.68
CDH13-202ENST00000428848 OSBPL3Q9H4L5 887 aa10.83□□□□□ -0.68
CDH13-202ENST00000428848 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
CDH13-202ENST00000428848 MTERF4Q7Z6M4 381 aaKnown RBP10.83□□□□□ -0.68
CDH13-202ENST00000428848 BCL11BQ9C0K0 894 aaPredicted RBP10.83□□□□□ -0.68
CDH13-202ENST00000428848 TTC21AQ8NDW8 1320 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 PKP1Q13835 747 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 EIF4A2Q14240 407 aaKnown RBP10.82□□□□□ -0.68
CDH13-202ENST00000428848 KRT24Q2M2I5 525 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 ZSCAN30Q86W11 494 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 SMAP1Q8IYB5 467 aaPredicted RBP10.82□□□□□ -0.68
CDH13-202ENST00000428848 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 CRB1P82279 1406 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms