RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 GORABQ5T7V8 394 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 WWC1Q8IX03 1113 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 TINF2Q9BSI4 451 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 PCGF6Q9BYE7 350 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 PHRF1Q9P1Y6 1649 aaKnown RBP4.29□□□□□ -1.72
RGPD1-203ENST00000428128 GPR37L1O60883 481 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 PRKAR2AP13861 404 aaKnown RBP4.29□□□□□ -1.72
RGPD1-203ENST00000428128 C4orf46Q504U0 113 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 JADE2Q9NQC1 790 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 KIF1BO60333 1816 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 PPP4CP60510 307 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 IRX6P78412 446 aaPredicted RBP4.29□□□□□ -1.72
RGPD1-203ENST00000428128 RALBP1Q15311 655 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 SDE2Q6IQ49 451 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 CCER1Q8TC90 406 aaPredicted RBP4.29□□□□□ -1.72
RGPD1-203ENST00000428128 RELTQ969Z4 430 aa4.29□□□□□ -1.72
RGPD1-203ENST00000428128 LAS1LQ9Y4W2 734 aaKnown RBP4.29□□□□□ -1.72
RGPD1-203ENST00000428128 PEAK1Q9H792 1746 aa4.28□□□□□ -1.72
RGPD1-203ENST00000428128 PARNO95453 639 aaKnown RBP4.28□□□□□ -1.72
RGPD1-203ENST00000428128 MARSP56192 900 aaKnown RBP4.28□□□□□ -1.72
RGPD1-203ENST00000428128 ZNF467Q7Z7K2 595 aaPredicted RBP4.28□□□□□ -1.72
RGPD1-203ENST00000428128 RASEFQ8IZ41 740 aa4.28□□□□□ -1.72
RGPD1-203ENST00000428128 BCL2L13Q9BXK5 485 aa4.28□□□□□ -1.72
RGPD1-203ENST00000428128 LNPKQ9C0E8 428 aa4.28□□□□□ -1.72
RGPD1-203ENST00000428128 ROBO1Q9Y6N7 1651 aa4.28□□□□□ -1.72
RGPD1-203ENST00000428128 SCAF11Q99590 1463 aaKnown RBP4.28□□□□□ -1.73
RGPD1-203ENST00000428128 OSBPP22059 807 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 OTUD5Q96G74 571 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 CREBZFQ9NS37 354 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 GEMIN8Q9NWZ8 242 aaKnown RBP4.27□□□□□ -1.73
RGPD1-203ENST00000428128 NUP188Q5SRE5 1749 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 DISP2A7MBM2 1401 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 FAM135BQ49AJ0 1406 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 HMGB1P1B2RPK0 211 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-203ENST00000428128 ZNF746Q6NUN9 644 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-203ENST00000428128 PIK3R5Q8WYR1 880 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 EVI5LQ96CN4 794 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 TMX1Q9H3N1 280 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 FAN1Q9Y2M0 1017 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 EHBP1L1Q8N3D4 1523 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 PPLO60437 1756 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 FCHSD2O94868 740 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 PTPROQ16827 1216 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 MYSM1Q5VVJ2 828 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 NLGN1Q8N2Q7 840 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 C1orf216Q8TAB5 229 aa4.27□□□□□ -1.73
RGPD1-203ENST00000428128 TMA7Q9Y2S6 64 aaKnown RBP4.27□□□□□ -1.73
RGPD1-203ENST00000428128 FAM161AQ3B820 660 aa4.26□□□□□ -1.73
RGPD1-203ENST00000428128 SSFA2P28290 1259 aa4.26□□□□□ -1.73
RGPD1-203ENST00000428128 AAMPQ13685 434 aa4.26□□□□□ -1.73
RGPD1-203ENST00000428128 PNISRQ8TF01 805 aaKnown RBP4.26□□□□□ -1.73
RGPD1-203ENST00000428128 JPH4Q96JJ6 628 aa4.26□□□□□ -1.73
RGPD1-203ENST00000428128 TYW1Q9NV66 732 aaKnown RBP4.26□□□□□ -1.73
RGPD1-203ENST00000428128 MBD5Q9P267 1494 aa4.26□□□□□ -1.73
RGPD1-203ENST00000428128 TRPM3Q9HCF6 1732 aaPredicted RBP4.26□□□□□ -1.73
RGPD1-203ENST00000428128 TOPAZ1Q8N9V7 1692 aa4.26□□□□□ -1.73
RGPD1-203ENST00000428128 LZTS3O60299 673 aaPredicted RBP4.26□□□□□ -1.73
RGPD1-203ENST00000428128 CENPBP07199 599 aaPredicted RBP4.26□□□□□ -1.73
RGPD1-203ENST00000428128 FECHP22830 423 aa4.26□□□□□ -1.73
RGPD1-203ENST00000428128 GJD4Q96KN9 370 aaPredicted RBP4.26□□□□□ -1.73
RGPD1-203ENST00000428128 CDC42BPGQ6DT37 1551 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 ADGRL2O95490 1459 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 ENPP3O14638 875 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 U2SURPO15042 1029 aaKnown RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 MAP4K4O95819 1239 aaPredicted RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 GJA5P36382 358 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 WASHC4Q2M389 1173 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 LONRF3Q496Y0 759 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 APBB1IPQ7Z5R6 666 aaPredicted RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 METTL16Q86W50 562 aaKnown RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 L3MBTL3Q96JM7 780 aaPredicted RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 EMILIN3Q9NT22 766 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 NOP58Q9Y2X3 529 aaKnown RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 PARP4Q9UKK3 1724 aaKnown RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 UHRF1BP1Q6BDS2 1440 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 CARNS1A5YM72 827 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 CLCN1P35523 988 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 HDLBPQ00341 1268 aaKnown RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 GDPD2Q9HCC8 539 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 POTEMA6NI47 508 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 ARID4AP29374 1257 aaPredicted RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 XPCQ01831 940 aaPredicted RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 PCGF5Q86SE9 256 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 RPUSD2Q8IZ73 545 aaKnown RBP4.25□□□□□ -1.73
RGPD1-203ENST00000428128 PMM1Q92871 262 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 UCN2Q96RP3 112 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 GPCPD1Q9NPB8 672 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 EGFL7Q9UHF1 273 aa4.25□□□□□ -1.73
RGPD1-203ENST00000428128 PALM3A6NDB9 673 aaPredicted RBP4.24□□□□□ -1.73
RGPD1-203ENST00000428128 HSD3B2P26439 372 aa4.24□□□□□ -1.73
RGPD1-203ENST00000428128 HDGFL1Q5TGJ6 251 aa4.24□□□□□ -1.73
RGPD1-203ENST00000428128 SLAIN2Q9P270 581 aa4.24□□□□□ -1.73
RGPD1-203ENST00000428128 PAPPAQ13219 1627 aa4.24□□□□□ -1.73
RGPD1-203ENST00000428128 THSD7BQ9C0I4 1608 aa4.24□□□□□ -1.73
RGPD1-203ENST00000428128 KANK4Q5T7N3 995 aaPredicted RBP4.24□□□□□ -1.73
RGPD1-203ENST00000428128 PPARGC1BQ86YN6 1023 aaKnown RBP4.24□□□□□ -1.73
RGPD1-203ENST00000428128 MS4A4AQ96JQ5 239 aa4.24□□□□□ -1.73
RGPD1-203ENST00000428128 FAM217BQ9NTX9 383 aaPredicted RBP4.24□□□□□ -1.73
RGPD1-203ENST00000428128 KLHL42Q9P2K6 505 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms