RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 IFNLR1Q8IU57 520 aaPredicted RBP6.75□□□□□ -1.33
HERC4-206ENST00000427635 DDX49Q9Y6V7 483 aaKnown RBP6.75□□□□□ -1.33
HERC4-206ENST00000427635 ZNF530Q6P9A1 599 aaPredicted RBP6.75□□□□□ -1.33
HERC4-206ENST00000427635 FAM43BQ6ZT52 329 aaPredicted RBP6.75□□□□□ -1.33
HERC4-206ENST00000427635 MNS1Q8NEH6 495 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 FYCO1Q9BQS8 1478 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 LPXNO60711 386 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 CCDC96Q2M329 555 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 ARGLU1Q9NWB6 273 aaPredicted RBP6.75□□□□□ -1.33
HERC4-206ENST00000427635 RRBP1Q9P2E9 1410 aaKnown RBP6.75□□□□□ -1.33
HERC4-206ENST00000427635 JAKMIP3Q5VZ66 844 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 A0A087WZG4 1122 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 RFC4P35249 363 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 RABEP1Q15276 862 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 TTLL5Q6EMB2 1281 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 JMYQ8N9B5 988 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 CABP5Q9NP86 173 aa6.75□□□□□ -1.33
HERC4-206ENST00000427635 DZIP1LQ8IYY4 767 aaKnown RBP6.74□□□□□ -1.33
HERC4-206ENST00000427635 MORC4Q8TE76 937 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 CDKL5O76039 1030 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 FAM161AQ3B820 660 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 STAMBPO95630 424 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 GIGYF2Q6Y7W6 1299 aaKnown RBP6.74□□□□□ -1.33
HERC4-206ENST00000427635 MKNK2Q9HBH9 465 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 HSP90B2PQ58FF3 399 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 KCNH5Q8NCM2 988 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 SDF4Q9BRK5 362 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 BTBD11A6QL63 1104 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 B4DLN1 442 aa6.74□□□□□ -1.33
HERC4-206ENST00000427635 MRPL12P52815 198 aaKnown RBP6.74□□□□□ -1.33
HERC4-206ENST00000427635 CENPQQ7L2Z9 268 aaPredicted RBP6.74□□□□□ -1.33
HERC4-206ENST00000427635 CCP110O43303 1012 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 TAF12Q16514 161 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 HSP90AB3PQ58FF7 597 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 CCDC91Q7Z6B0 441 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 WASF1Q92558 559 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 FAM13BQ9NYF5 915 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 EXOC5O00471 708 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 GOLGA6L10A6NI86 522 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 C6orf229H3BNL8 230 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 SURF6O75683 361 aaKnown RBP6.73□□□□□ -1.33
HERC4-206ENST00000427635 PIBF1Q8WXW3 757 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 FERMT1Q9BQL6 677 aa6.73□□□□□ -1.33
HERC4-206ENST00000427635 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
HERC4-206ENST00000427635 FKBP4Q02790 459 aaKnown RBP eCLIP6.73□□□□□ -1.33
HERC4-206ENST00000427635 IFIT1P09914 478 aaKnown RBP6.73□□□□□ -1.33
HERC4-206ENST00000427635 APBB1IPQ7Z5R6 666 aaPredicted RBP6.73□□□□□ -1.33
HERC4-206ENST00000427635 CCDC117Q8IWD4 279 aaPredicted RBP6.73□□□□□ -1.33
HERC4-206ENST00000427635 ZNF444Q8N0Y2 327 aaPredicted RBP6.73□□□□□ -1.33
HERC4-206ENST00000427635 KIF4AO95239 1232 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 HLA-DOAP06340 250 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 NOM1Q5C9Z4 860 aaKnown RBP6.72□□□□□ -1.33
HERC4-206ENST00000427635 UTP14AQ9BVJ6 771 aaKnown RBP6.72□□□□□ -1.33
HERC4-206ENST00000427635 NCBP1Q09161 790 aaKnown RBP6.72□□□□□ -1.33
HERC4-206ENST00000427635 CTNNA3Q9UI47 895 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 STK38Q15208 465 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 METTL24Q5JXM2 366 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 TAF3Q5VWG9 929 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 ZNF354CQ86Y25 554 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 L3MBTL2Q969R5 705 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 TSG101Q99816 390 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 CEP126Q9P2H0 1117 aa6.72□□□□□ -1.33
HERC4-206ENST00000427635 LOC102724159A0A0B4J2E5 919 aa6.71□□□□□ -1.33
HERC4-206ENST00000427635 RGL2O15211 777 aa6.71□□□□□ -1.33
HERC4-206ENST00000427635 KINO60870 393 aaKnown RBP6.71□□□□□ -1.33
HERC4-206ENST00000427635 BAG4O95429 457 aaKnown RBP6.71□□□□□ -1.33
HERC4-206ENST00000427635 LIG1P18858 919 aa6.71□□□□□ -1.33
HERC4-206ENST00000427635 PWP2Q15269 919 aaKnown RBP6.71□□□□□ -1.33
HERC4-206ENST00000427635 CEP131Q9UPN4 1083 aa6.71□□□□□ -1.33
HERC4-206ENST00000427635 SLC5A1P13866 664 aa6.71□□□□□ -1.33
HERC4-206ENST00000427635 HDGFL1Q5TGJ6 251 aa6.71□□□□□ -1.33
HERC4-206ENST00000427635 UQCRHLA0A096LP55 91 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 LETM1O95202 739 aaPredicted RBP6.71□□□□□ -1.34
HERC4-206ENST00000427635 GNAI2P04899 355 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 CBX1P83916 185 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.34
HERC4-206ENST00000427635 ANKRD1Q15327 319 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 DDX46Q7L014 1031 aaKnown RBP6.71□□□□□ -1.34
HERC4-206ENST00000427635 AIDAQ96BJ3 306 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 GPBP1L1Q9HC44 474 aaPredicted RBP6.71□□□□□ -1.34
HERC4-206ENST00000427635 SPINK5Q9NQ38 1064 aaPredicted RBP6.71□□□□□ -1.34
HERC4-206ENST00000427635 RAB3GAP2Q9H2M9 1393 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 VPS8Q8N3P4 1428 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 ABCF2Q9UG63 623 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 PARP3Q9Y6F1 533 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 RTEL1-TNFRSF6BF6WH68 1400 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 CEP57L1Q8IYX8 460 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 TTC16Q8NEE8 873 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 SIL1Q9H173 461 aa6.71□□□□□ -1.34
HERC4-206ENST00000427635 CCDC88BA6NC98 1476 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 PPFIBP1Q86W92 1011 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 TMTC2Q8N394 836 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 PRAM1Q96QH2 718 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 TRIM5Q9C035 493 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 BRD1O95696 1058 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 UQCRHP07919 91 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 ZC3H6P61129 1189 aaKnown RBP6.7□□□□□ -1.34
HERC4-206ENST00000427635 BIRC2Q13490 618 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms