RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 CHD1LQ86WJ1 897 aa24.23■■□□□ 1.47
SNX17-202ENST00000427123 MTHFSDQ2M296 383 aaKnown RBP24.22■■□□□ 1.47
SNX17-202ENST00000427123 GAS2L2Q8NHY3 880 aa24.22■■□□□ 1.47
SNX17-202ENST00000427123 EYA1Q99502 592 aa24.22■■□□□ 1.47
SNX17-202ENST00000427123 RGS12O14924 1447 aa24.21■■□□□ 1.47
SNX17-202ENST00000427123 RTF1Q92541 710 aaKnown RBP24.21■■□□□ 1.47
SNX17-202ENST00000427123 NWD1Q149M9 1564 aa24.21■■□□□ 1.47
SNX17-202ENST00000427123 C1orf115Q9H7X2 142 aa24.2■■□□□ 1.47
SNX17-202ENST00000427123 INTS3Q68E01 1043 aaKnown RBP24.2■■□□□ 1.46
SNX17-202ENST00000427123 RTL1A6NKG5 1358 aa24.19■■□□□ 1.46
SNX17-202ENST00000427123 HOXC9P31274 260 aa24.19■■□□□ 1.46
SNX17-202ENST00000427123 KRT24Q2M2I5 525 aa24.19■■□□□ 1.46
SNX17-202ENST00000427123 LNPKQ9C0E8 428 aa24.19■■□□□ 1.46
SNX17-202ENST00000427123 LTN1O94822 1766 aa24.19■■□□□ 1.46
SNX17-202ENST00000427123 PTPRCP08575 1304 aa24.19■■□□□ 1.46
SNX17-202ENST00000427123 ADGRL3Q9HAR2 1447 aa24.17■■□□□ 1.46
SNX17-202ENST00000427123 FOXO3O43524 673 aa24.17■■□□□ 1.46
SNX17-202ENST00000427123 HTATSF1O43719 755 aaKnown RBP24.17■■□□□ 1.46
SNX17-202ENST00000427123 ABTB2Q8N961 1025 aa24.17■■□□□ 1.46
SNX17-202ENST00000427123 PHF8Q9UPP1 1060 aa24.17■■□□□ 1.46
SNX17-202ENST00000427123 SIRT2Q8IXJ6 389 aa24.16■■□□□ 1.46
SNX17-202ENST00000427123 NUTM2GQ5VZR2 741 aa24.15■■□□□ 1.46
SNX17-202ENST00000427123 TSPYL4Q9UJ04 414 aa24.15■■□□□ 1.46
SNX17-202ENST00000427123 SETD1BQ9UPS6 1966 aaKnown RBP24.14■■□□□ 1.45
SNX17-202ENST00000427123 NFKBIBQ15653 356 aa24.14■■□□□ 1.45
SNX17-202ENST00000427123 ANKRD45Q5TZF3 282 aa24.14■■□□□ 1.45
SNX17-202ENST00000427123 NFAT5O94916 1531 aa24.13■■□□□ 1.45
SNX17-202ENST00000427123 BMP2KLQ5H9B9 411 aa24.13■■□□□ 1.45
SNX17-202ENST00000427123 FAM208AQ9UK61 1670 aaKnown RBP24.12■■□□□ 1.45
SNX17-202ENST00000427123 MFAP1P55081 439 aaKnown RBP24.11■■□□□ 1.45
SNX17-202ENST00000427123 C22orf23Q9BZE7 217 aa24.11■■□□□ 1.45
SNX17-202ENST00000427123 ATP10DQ9P241 1426 aa24.11■■□□□ 1.45
SNX17-202ENST00000427123 PHRF1Q9P1Y6 1649 aaKnown RBP24.11■■□□□ 1.45
SNX17-202ENST00000427123 MSH6P52701 1360 aa24.11■■□□□ 1.45
SNX17-202ENST00000427123 GNAT3A8MTJ3 354 aa24.1■■□□□ 1.45
SNX17-202ENST00000427123 MAP3K5Q99683 1374 aa24.1■■□□□ 1.45
SNX17-202ENST00000427123 NPHP4O75161 1426 aaPredicted RBP24.09■■□□□ 1.45
SNX17-202ENST00000427123 MIS18AQ9NYP9 233 aa24.09■■□□□ 1.45
SNX17-202ENST00000427123 SLC4A2P04920 1241 aa24.08■■□□□ 1.44
SNX17-202ENST00000427123 C14orf37Q86TY3 774 aa24.08■■□□□ 1.44
SNX17-202ENST00000427123 ANKRD44Q8N8A2 993 aa24.07■■□□□ 1.44
SNX17-202ENST00000427123 RPAP2Q8IXW5 612 aaPredicted RBP24.06■■□□□ 1.44
SNX17-202ENST00000427123 DCTPP1Q9H773 170 aa24.06■■□□□ 1.44
SNX17-202ENST00000427123 TBC1D2Q9BYX2 928 aa24.06■■□□□ 1.44
SNX17-202ENST00000427123 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
SNX17-202ENST00000427123 BABAM1Q9NWV8 329 aa24.05■■□□□ 1.44
SNX17-202ENST00000427123 CACNA1FO60840 1977 aa24.05■■□□□ 1.44
SNX17-202ENST00000427123 IP6K1Q92551 441 aa24.05■■□□□ 1.44
SNX17-202ENST00000427123 LTV1Q96GA3 475 aaPredicted RBP24.04■■□□□ 1.44
SNX17-202ENST00000427123 N4BP2Q86UW6 1770 aaPredicted RBP24.03■■□□□ 1.44
SNX17-202ENST00000427123 ESCO1Q5FWF5 840 aa24.03■■□□□ 1.44
SNX17-202ENST00000427123 CEP85Q6P2H3 762 aa24.03■■□□□ 1.44
SNX17-202ENST00000427123 CCT4P50991 539 aaKnown RBP24.02■■□□□ 1.44
SNX17-202ENST00000427123 PSME1Q06323 249 aa24.02■■□□□ 1.44
SNX17-202ENST00000427123 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
SNX17-202ENST00000427123 STK31Q9BXU1 1019 aa24.02■■□□□ 1.44
SNX17-202ENST00000427123 RBM33Q96EV2 1170 aaKnown RBP24.01■■□□□ 1.43
SNX17-202ENST00000427123 RBM25P49756 843 aaKnown RBP24.01■■□□□ 1.43
SNX17-202ENST00000427123 MEIS3Q99687 375 aa24■■□□□ 1.43
SNX17-202ENST00000427123 MED1Q15648 1581 aaPredicted RBP24■■□□□ 1.43
SNX17-202ENST00000427123 CCDC30Q5VVM6 783 aa24■■□□□ 1.43
SNX17-202ENST00000427123 G2E3Q7L622 706 aa24■■□□□ 1.43
SNX17-202ENST00000427123 IL17REQ8NFR9 667 aa24■■□□□ 1.43
SNX17-202ENST00000427123 ANTXR1Q9H6X2 564 aa24■■□□□ 1.43
SNX17-202ENST00000427123 SLIT3O75094 1523 aa23.99■■□□□ 1.43
SNX17-202ENST00000427123 LMO7Q8WWI1 1683 aa23.98■■□□□ 1.43
SNX17-202ENST00000427123 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
SNX17-202ENST00000427123 SLKQ9H2G2 1235 aaPredicted RBP23.98■■□□□ 1.43
SNX17-202ENST00000427123 RGPD2P0DJD1 1756 aa23.97■■□□□ 1.43
SNX17-202ENST00000427123 FRAT2O75474 233 aaPredicted RBP23.97■■□□□ 1.43
SNX17-202ENST00000427123 USHBP1Q8N6Y0 703 aa23.97■■□□□ 1.43
SNX17-202ENST00000427123 KIF1AQ12756 1690 aa23.97■■□□□ 1.43
SNX17-202ENST00000427123 PLEKHM2Q8IWE5 1019 aa23.96■■□□□ 1.43
SNX17-202ENST00000427123 TRPM3Q9HCF6 1732 aaPredicted RBP23.96■■□□□ 1.43
SNX17-202ENST00000427123 CEMIPQ8WUJ3 1361 aa23.96■■□□□ 1.43
SNX17-202ENST00000427123 PXDNLA1KZ92 1463 aa23.96■■□□□ 1.43
SNX17-202ENST00000427123 KDM3BQ7LBC6 1761 aa23.95■■□□□ 1.42
SNX17-202ENST00000427123 HMMRO75330 724 aa23.95■■□□□ 1.42
SNX17-202ENST00000427123 CDC45O75419 566 aa23.95■■□□□ 1.42
SNX17-202ENST00000427123 SLC4A10Q6U841 1118 aa23.95■■□□□ 1.42
SNX17-202ENST00000427123 TBC1D9Q6ZT07 1266 aa23.95■■□□□ 1.42
SNX17-202ENST00000427123 EIF5BO60841 1220 aaKnown RBP23.94■■□□□ 1.42
SNX17-202ENST00000427123 FLIIQ13045 1269 aa23.94■■□□□ 1.42
SNX17-202ENST00000427123 F6X3S4 739 aa23.94■■□□□ 1.42
SNX17-202ENST00000427123 NBPF6Q5VWK0 638 aa23.93■■□□□ 1.42
SNX17-202ENST00000427123 NBPF4Q96M43 638 aa23.93■■□□□ 1.42
SNX17-202ENST00000427123 GSPT1P15170 499 aaKnown RBP23.93■■□□□ 1.42
SNX17-202ENST00000427123 TTC22Q5TAA0 569 aa23.93■■□□□ 1.42
SNX17-202ENST00000427123 HSCBQ8IWL3 235 aa23.93■■□□□ 1.42
SNX17-202ENST00000427123 CAMTA1Q9Y6Y1 1673 aa23.92■■□□□ 1.42
SNX17-202ENST00000427123 NCAPD2Q15021 1401 aa23.92■■□□□ 1.42
SNX17-202ENST00000427123 FKBP5Q13451 457 aaPredicted RBP23.91■■□□□ 1.42
SNX17-202ENST00000427123 GNAI2P04899 355 aa23.9■■□□□ 1.42
SNX17-202ENST00000427123 GSE1Q14687 1217 aa23.9■■□□□ 1.42
SNX17-202ENST00000427123 SNX21Q969T3 373 aa23.9■■□□□ 1.42
SNX17-202ENST00000427123 ORAI2Q96SN7 254 aa23.9■■□□□ 1.42
SNX17-202ENST00000427123 ZBTB7CA1YPR0 619 aa23.88■■□□□ 1.41
SNX17-202ENST00000427123 GNAI3P08754 354 aa23.88■■□□□ 1.41
SNX17-202ENST00000427123 GCP02774 474 aa23.88■■□□□ 1.41
SNX17-202ENST00000427123 ARHGEF25Q86VW2 580 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms