RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 TEX13AQ9BXU3 409 aaPredicted RBP16.69■□□□□ 0.26
RPL28-202ENST00000426763 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
RPL28-202ENST00000426763 NACAP1Q9BZK3 213 aa16.68■□□□□ 0.26
RPL28-202ENST00000426763 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
RPL28-202ENST00000426763 HYPKQ9NX55 129 aa16.68■□□□□ 0.26
RPL28-202ENST00000426763 UHRF1BP1Q6BDS2 1440 aa16.68■□□□□ 0.26
RPL28-202ENST00000426763 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
RPL28-202ENST00000426763 MAST1Q9Y2H9 1570 aa16.68■□□□□ 0.26
RPL28-202ENST00000426763 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.68■□□□□ 0.26
RPL28-202ENST00000426763 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
RPL28-202ENST00000426763 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
RPL28-202ENST00000426763 MYD88Q99836 296 aa16.67■□□□□ 0.26
RPL28-202ENST00000426763 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
RPL28-202ENST00000426763 HOOK1Q9UJC3 728 aaKnown RBP16.67■□□□□ 0.26
RPL28-202ENST00000426763 ASXL1Q8IXJ9 1541 aa16.67■□□□□ 0.26
RPL28-202ENST00000426763 RARSP54136 660 aaKnown RBP16.67■□□□□ 0.26
RPL28-202ENST00000426763 GOLGA6L19H0YKK7 550 aa16.66■□□□□ 0.26
RPL28-202ENST00000426763 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
RPL28-202ENST00000426763 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
RPL28-202ENST00000426763 BECN2A8MW95 431 aa16.66■□□□□ 0.26
RPL28-202ENST00000426763 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
RPL28-202ENST00000426763 TPM2P07951 284 aa16.66■□□□□ 0.26
RPL28-202ENST00000426763 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
RPL28-202ENST00000426763 KCNA6P17658 529 aa16.66■□□□□ 0.26
RPL28-202ENST00000426763 TRPM2O94759 1503 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 ARHGEF12Q9NZN5 1544 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPL28-202ENST00000426763 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
RPL28-202ENST00000426763 MCM2P49736 904 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 FOSBP53539 338 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 RRP12Q5JTH9 1297 aaKnown RBP16.65■□□□□ 0.26
RPL28-202ENST00000426763 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
RPL28-202ENST00000426763 HSP90AB2PQ58FF8 381 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 CFAP74Q9C0B2 1584 aa16.65■□□□□ 0.26
RPL28-202ENST00000426763 ABCC1P33527 1531 aa16.64■□□□□ 0.26
RPL28-202ENST00000426763 ZFYVE16Q7Z3T8 1539 aa16.64■□□□□ 0.25
RPL28-202ENST00000426763 IL1RAPL2Q9NP60 686 aa16.64■□□□□ 0.25
RPL28-202ENST00000426763 RABEP1Q15276 862 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
RPL28-202ENST00000426763 METTL24Q5JXM2 366 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 CCDC43Q96MW1 224 aaKnown RBP16.63■□□□□ 0.25
RPL28-202ENST00000426763 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
RPL28-202ENST00000426763 AKAP2Q9Y2D5 859 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 NEK4P51957 841 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 PZPP20742 1482 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 PTPRCP08575 1304 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 IL16Q14005 1332 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 KIF1BPQ96EK5 621 aa16.63■□□□□ 0.25
RPL28-202ENST00000426763 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
RPL28-202ENST00000426763 ZCRB1Q8TBF4 217 aaKnown RBP16.62■□□□□ 0.25
RPL28-202ENST00000426763 NPATQ14207 1427 aa16.62■□□□□ 0.25
RPL28-202ENST00000426763 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
RPL28-202ENST00000426763 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
RPL28-202ENST00000426763 FBLN1P23142 703 aa16.61■□□□□ 0.25
RPL28-202ENST00000426763 TSR1Q2NL82 804 aaKnown RBP16.61■□□□□ 0.25
RPL28-202ENST00000426763 RBM5P52756 815 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPL28-202ENST00000426763 RAI14Q9P0K7 980 aa16.61■□□□□ 0.25
RPL28-202ENST00000426763 FLIIQ13045 1269 aa16.6■□□□□ 0.25
RPL28-202ENST00000426763 CCDC73Q6ZRK6 1079 aa16.6■□□□□ 0.25
RPL28-202ENST00000426763 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
RPL28-202ENST00000426763 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
RPL28-202ENST00000426763 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
RPL28-202ENST00000426763 LRP2BPQ9P2M1 347 aa16.6■□□□□ 0.25
RPL28-202ENST00000426763 TPM1P09493 284 aa16.6■□□□□ 0.25
RPL28-202ENST00000426763 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
RPL28-202ENST00000426763 FLT4P35916 1363 aa16.6■□□□□ 0.25
RPL28-202ENST00000426763 TPM3P06753 285 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 IFIT5Q13325 482 aaKnown RBP16.59■□□□□ 0.25
RPL28-202ENST00000426763 IFIT1P09914 478 aaKnown RBP16.59■□□□□ 0.25
RPL28-202ENST00000426763 AK7Q96M32 723 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 F6X3S4 739 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 LRRC59Q96AG4 307 aaKnown RBP16.59■□□□□ 0.25
RPL28-202ENST00000426763 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 FAM83GA6ND36 823 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 PDCP20941 246 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 ANKRD20A12PQ8NF67 263 aa16.59■□□□□ 0.25
RPL28-202ENST00000426763 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.25
RPL28-202ENST00000426763 ANKRD1Q15327 319 aa16.58■□□□□ 0.25
RPL28-202ENST00000426763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.58■□□□□ 0.25
RPL28-202ENST00000426763 CEP89Q96ST8 783 aa16.58■□□□□ 0.24
RPL28-202ENST00000426763 CAVIN4Q5BKX8 364 aa16.58■□□□□ 0.24
RPL28-202ENST00000426763 TESK2Q96S53 571 aa16.58■□□□□ 0.24
RPL28-202ENST00000426763 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
RPL28-202ENST00000426763 ABCA8O94911 1581 aa16.57■□□□□ 0.24
RPL28-202ENST00000426763 A0A087WZG4 1122 aa16.57■□□□□ 0.24
RPL28-202ENST00000426763 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
RPL28-202ENST00000426763 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
RPL28-202ENST00000426763 C8orf37Q96NL8 207 aa16.57■□□□□ 0.24
RPL28-202ENST00000426763 AKAP4Q5JQC9 854 aa16.57■□□□□ 0.24
RPL28-202ENST00000426763 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
RPL28-202ENST00000426763 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
RPL28-202ENST00000426763 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
RPL28-202ENST00000426763 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
RPL28-202ENST00000426763 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
RPL28-202ENST00000426763 TDO2P48775 406 aa16.56■□□□□ 0.24
RPL28-202ENST00000426763 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
RPL28-202ENST00000426763 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms