RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 FOXD4L3Q6VB84 417 aaPredicted RBP10.67□□□□□ -0.7
VPS8-204ENST00000424463 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
VPS8-204ENST00000424463 PLEKHF1Q96S99 279 aa10.67□□□□□ -0.7
VPS8-204ENST00000424463 CRBNQ96SW2 442 aa10.67□□□□□ -0.7
VPS8-204ENST00000424463 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
VPS8-204ENST00000424463 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
VPS8-204ENST00000424463 EDC4Q6P2E9 1401 aaKnown RBP10.67□□□□□ -0.7
VPS8-204ENST00000424463 BCAR3O75815 825 aa10.67□□□□□ -0.7
VPS8-204ENST00000424463 ACEP12821 1306 aa10.66□□□□□ -0.7
VPS8-204ENST00000424463 KCNA6P17658 529 aa10.66□□□□□ -0.7
VPS8-204ENST00000424463 MAP7D2Q96T17 732 aa10.66□□□□□ -0.7
VPS8-204ENST00000424463 COL3A1P02461 1466 aaPredicted RBP10.66□□□□□ -0.7
VPS8-204ENST00000424463 KNDC1Q76NI1 1749 aa10.66□□□□□ -0.7
VPS8-204ENST00000424463 RRS1Q15050 365 aaKnown RBP10.66□□□□□ -0.7
VPS8-204ENST00000424463 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
VPS8-204ENST00000424463 RBM33Q96EV2 1170 aaKnown RBP10.66□□□□□ -0.7
VPS8-204ENST00000424463 PNPLA6Q8IY17 1366 aa10.65□□□□□ -0.7
VPS8-204ENST00000424463 ZNF500O60304 480 aaPredicted RBP10.65□□□□□ -0.7
VPS8-204ENST00000424463 COG3Q96JB2 828 aa10.65□□□□□ -0.7
VPS8-204ENST00000424463 DNAJC14Q6Y2X3 702 aaPredicted RBP10.65□□□□□ -0.71
VPS8-204ENST00000424463 IQSEC2Q5JU85 1478 aa10.65□□□□□ -0.71
VPS8-204ENST00000424463 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
VPS8-204ENST00000424463 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
VPS8-204ENST00000424463 CASC1Q6TDU7 716 aa10.64□□□□□ -0.71
VPS8-204ENST00000424463 RIMS1Q86UR5 1692 aaKnown RBP10.64□□□□□ -0.71
VPS8-204ENST00000424463 TTC21BQ7Z4L5 1316 aa10.64□□□□□ -0.71
VPS8-204ENST00000424463 NKTRP30414 1462 aaKnown RBP10.64□□□□□ -0.71
VPS8-204ENST00000424463 TMPOP42166 694 aaKnown RBP10.63□□□□□ -0.71
VPS8-204ENST00000424463 ANKLE2Q86XL3 938 aa10.63□□□□□ -0.71
VPS8-204ENST00000424463 WDR63Q8IWG1 891 aa10.63□□□□□ -0.71
VPS8-204ENST00000424463 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
VPS8-204ENST00000424463 CDC42BPGQ6DT37 1551 aa10.63□□□□□ -0.71
VPS8-204ENST00000424463 HMOX1P09601 288 aa10.63□□□□□ -0.71
VPS8-204ENST00000424463 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
VPS8-204ENST00000424463 TRIM35Q9UPQ4 493 aa10.63□□□□□ -0.71
VPS8-204ENST00000424463 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
VPS8-204ENST00000424463 ANKRD26Q9UPS8 1709 aa10.62□□□□□ -0.71
VPS8-204ENST00000424463 KIF20BQ96Q89 1820 aa10.62□□□□□ -0.71
VPS8-204ENST00000424463 SPTY2D1Q68D10 685 aaPredicted RBP10.62□□□□□ -0.71
VPS8-204ENST00000424463 NBPF10Q6P3W6 841 aaKnown RBP10.62□□□□□ -0.71
VPS8-204ENST00000424463 BORCS6Q96GS4 357 aa10.62□□□□□ -0.71
VPS8-204ENST00000424463 MAPK8IP3Q9UPT6 1336 aa10.62□□□□□ -0.71
VPS8-204ENST00000424463 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
VPS8-204ENST00000424463 IL13P35225 146 aa10.61□□□□□ -0.71
VPS8-204ENST00000424463 RIPK4P57078 832 aa10.61□□□□□ -0.71
VPS8-204ENST00000424463 PHACTR3Q96KR7 559 aa10.61□□□□□ -0.71
VPS8-204ENST00000424463 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
VPS8-204ENST00000424463 RIPOR2Q9Y4F9 1068 aa10.61□□□□□ -0.71
VPS8-204ENST00000424463 CEP170BQ9Y4F5 1589 aaPredicted RBP10.61□□□□□ -0.71
VPS8-204ENST00000424463 FCHSD2O94868 740 aa10.61□□□□□ -0.71
VPS8-204ENST00000424463 ARID4AP29374 1257 aaPredicted RBP10.61□□□□□ -0.71
VPS8-204ENST00000424463 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
VPS8-204ENST00000424463 TSR2Q969E8 191 aaKnown RBP10.61□□□□□ -0.71
VPS8-204ENST00000424463 NGDNQ8NEJ9 315 aaKnown RBP10.6□□□□□ -0.71
VPS8-204ENST00000424463 EP400NLQ6ZTU2 488 aa10.6□□□□□ -0.71
VPS8-204ENST00000424463 AEBP1Q8IUX7 1158 aa10.6□□□□□ -0.71
VPS8-204ENST00000424463 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
VPS8-204ENST00000424463 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.59□□□□□ -0.71
VPS8-204ENST00000424463 RNF217Q8TC41 542 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 BCL2L13Q9BXK5 485 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 RAI14Q9P0K7 980 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 PTCH1Q13635 1447 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 ADGRB2O60241 1585 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 AATKQ6ZMQ8 1374 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 USP6P35125 1406 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 RARSP54136 660 aaKnown RBP10.59□□□□□ -0.71
VPS8-204ENST00000424463 BANK1Q8NDB2 785 aa10.59□□□□□ -0.71
VPS8-204ENST00000424463 BRD1O95696 1058 aa10.58□□□□□ -0.72
VPS8-204ENST00000424463 SATB1Q01826 763 aa10.58□□□□□ -0.72
VPS8-204ENST00000424463 SKAP1Q86WV1 359 aa10.58□□□□□ -0.72
VPS8-204ENST00000424463 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
VPS8-204ENST00000424463 MYH16Q9H6N6 1097 aa10.58□□□□□ -0.72
VPS8-204ENST00000424463 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
VPS8-204ENST00000424463 MYBPC2Q14324 1141 aa10.58□□□□□ -0.72
VPS8-204ENST00000424463 NUTM2GQ5VZR2 741 aa10.58□□□□□ -0.72
VPS8-204ENST00000424463 ADAMTSL3P82987 1691 aa10.58□□□□□ -0.72
VPS8-204ENST00000424463 MON2Q7Z3U7 1717 aa10.57□□□□□ -0.72
VPS8-204ENST00000424463 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
VPS8-204ENST00000424463 THUMPD2Q9BTF0 503 aaKnown RBP10.57□□□□□ -0.72
VPS8-204ENST00000424463 TNNQ9UQP3 1299 aa10.57□□□□□ -0.72
VPS8-204ENST00000424463 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
VPS8-204ENST00000424463 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
VPS8-204ENST00000424463 EXOSC9Q06265 439 aaKnown RBP10.57□□□□□ -0.72
VPS8-204ENST00000424463 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
VPS8-204ENST00000424463 ARMCX6Q7L4S7 300 aa10.57□□□□□ -0.72
VPS8-204ENST00000424463 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
VPS8-204ENST00000424463 SSH2Q76I76 1423 aa10.56□□□□□ -0.72
VPS8-204ENST00000424463 GOLIM4O00461 696 aa10.56□□□□□ -0.72
VPS8-204ENST00000424463 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
VPS8-204ENST00000424463 NBPF6Q5VWK0 638 aa10.56□□□□□ -0.72
VPS8-204ENST00000424463 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
VPS8-204ENST00000424463 NME8Q8N427 588 aa10.56□□□□□ -0.72
VPS8-204ENST00000424463 NBPF4Q96M43 638 aa10.56□□□□□ -0.72
VPS8-204ENST00000424463 ITSN1Q15811 1721 aa10.55□□□□□ -0.72
VPS8-204ENST00000424463 ZNF513Q8N8E2 541 aaPredicted RBP10.55□□□□□ -0.72
VPS8-204ENST00000424463 PIK3R4Q99570 1358 aa10.55□□□□□ -0.72
VPS8-204ENST00000424463 TOPAZ1Q8N9V7 1692 aa10.55□□□□□ -0.72
VPS8-204ENST00000424463 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
VPS8-204ENST00000424463 NFE2L2Q16236 605 aa10.55□□□□□ -0.72
VPS8-204ENST00000424463 PIAS4Q8N2W9 510 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms