RNA–Protein interactions for RNA: ENST00000422728.2

FAM200B-201, Transcript of family with sequence similarity 200 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-201ENST00000422728 FOXD4L5Q5VV16 416 aaPredicted RBP17.42■□□□□ 0.38
FAM200B-201ENST00000422728 FOXD4L4Q8WXT5 416 aaPredicted RBP17.42■□□□□ 0.38
FAM200B-201ENST00000422728 RBM27Q9P2N5 1060 aaKnown RBP17.42■□□□□ 0.38
FAM200B-201ENST00000422728 SDSP20132 328 aa17.42■□□□□ 0.38
FAM200B-201ENST00000422728 RIMS2Q9UQ26 1411 aa17.41■□□□□ 0.38
FAM200B-201ENST00000422728 RABEP1Q15276 862 aa17.41■□□□□ 0.38
FAM200B-201ENST00000422728 CLEC17AQ6ZS10 378 aa17.41■□□□□ 0.38
FAM200B-201ENST00000422728 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
FAM200B-201ENST00000422728 LMBRD1Q9NUN5 540 aa17.41■□□□□ 0.38
FAM200B-201ENST00000422728 SIRT1Q96EB6 747 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 ATP10DQ9P241 1426 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
FAM200B-201ENST00000422728 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
FAM200B-201ENST00000422728 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
FAM200B-201ENST00000422728 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 ZSCAN23Q3MJ62 389 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 PPP1R9BQ96SB3 815 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 MEIS3Q99687 375 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
FAM200B-201ENST00000422728 RBSNQ9H1K0 784 aa17.39■□□□□ 0.37
FAM200B-201ENST00000422728 PRPF40AO75400 957 aaKnown RBP17.39■□□□□ 0.37
FAM200B-201ENST00000422728 TSHZ3Q63HK5 1081 aa17.39■□□□□ 0.37
FAM200B-201ENST00000422728 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
FAM200B-201ENST00000422728 MCM10Q7L590 875 aa17.39■□□□□ 0.37
FAM200B-201ENST00000422728 NSFL1CQ9UNZ2 370 aaKnown RBP17.39■□□□□ 0.37
FAM200B-201ENST00000422728 MSH6P52701 1360 aa17.38■□□□□ 0.37
FAM200B-201ENST00000422728 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
FAM200B-201ENST00000422728 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
FAM200B-201ENST00000422728 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
FAM200B-201ENST00000422728 GPT2Q8TD30 523 aa17.38■□□□□ 0.37
FAM200B-201ENST00000422728 RGS12O14924 1447 aa17.38■□□□□ 0.37
FAM200B-201ENST00000422728 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
FAM200B-201ENST00000422728 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
FAM200B-201ENST00000422728 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
FAM200B-201ENST00000422728 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
FAM200B-201ENST00000422728 PTMSP20962 102 aa17.37■□□□□ 0.37
FAM200B-201ENST00000422728 UBR1Q8IWV7 1749 aa17.37■□□□□ 0.37
FAM200B-201ENST00000422728 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
FAM200B-201ENST00000422728 ZSCAN30Q86W11 494 aa17.36■□□□□ 0.37
FAM200B-201ENST00000422728 RRP9O43818 475 aaKnown RBP17.36■□□□□ 0.37
FAM200B-201ENST00000422728 KIF24Q5T7B8 1368 aa17.35■□□□□ 0.37
FAM200B-201ENST00000422728 ZNF445P59923 1031 aa17.34■□□□□ 0.37
FAM200B-201ENST00000422728 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
FAM200B-201ENST00000422728 NUCB2P80303 420 aa17.34■□□□□ 0.37
FAM200B-201ENST00000422728 SULT6B1Q6IMI4 303 aa17.34■□□□□ 0.37
FAM200B-201ENST00000422728 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
FAM200B-201ENST00000422728 IBTKQ9P2D0 1353 aaPredicted RBP17.33■□□□□ 0.37
FAM200B-201ENST00000422728 F6X3S4 739 aa17.33■□□□□ 0.37
FAM200B-201ENST00000422728 NOL8Q76FK4 1167 aaKnown RBP17.33■□□□□ 0.37
FAM200B-201ENST00000422728 COG3Q96JB2 828 aa17.33■□□□□ 0.36
FAM200B-201ENST00000422728 TMEM63CQ9P1W3 806 aa17.33■□□□□ 0.36
FAM200B-201ENST00000422728 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
FAM200B-201ENST00000422728 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.32■□□□□ 0.36
FAM200B-201ENST00000422728 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
FAM200B-201ENST00000422728 SOX12O15370 315 aa17.32■□□□□ 0.36
FAM200B-201ENST00000422728 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
FAM200B-201ENST00000422728 SLC4A10Q6U841 1118 aa17.31■□□□□ 0.36
FAM200B-201ENST00000422728 G2E3Q7L622 706 aa17.31■□□□□ 0.36
FAM200B-201ENST00000422728 SYCE3A1L190 88 aa17.31■□□□□ 0.36
FAM200B-201ENST00000422728 WASLO00401 505 aaPredicted RBP17.31■□□□□ 0.36
FAM200B-201ENST00000422728 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
FAM200B-201ENST00000422728 USP54Q70EL1 1684 aa17.31■□□□□ 0.36
FAM200B-201ENST00000422728 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
FAM200B-201ENST00000422728 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
FAM200B-201ENST00000422728 TSPOAP1O95153 1857 aa17.3■□□□□ 0.36
FAM200B-201ENST00000422728 ST18O60284 1047 aa17.3■□□□□ 0.36
FAM200B-201ENST00000422728 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
FAM200B-201ENST00000422728 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
FAM200B-201ENST00000422728 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
FAM200B-201ENST00000422728 RPAP2Q8IXW5 612 aaPredicted RBP17.3■□□□□ 0.36
FAM200B-201ENST00000422728 NUDT16Q96DE0 195 aaKnown RBP17.3■□□□□ 0.36
FAM200B-201ENST00000422728 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
FAM200B-201ENST00000422728 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
FAM200B-201ENST00000422728 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
FAM200B-201ENST00000422728 EXOC6BQ9Y2D4 811 aa17.3■□□□□ 0.36
FAM200B-201ENST00000422728 RNF214Q8ND24 703 aa17.29■□□□□ 0.36
FAM200B-201ENST00000422728 FOXO3O43524 673 aa17.29■□□□□ 0.36
FAM200B-201ENST00000422728 OFD1O75665 1012 aa17.29■□□□□ 0.36
FAM200B-201ENST00000422728 NEK4P51957 841 aa17.29■□□□□ 0.36
FAM200B-201ENST00000422728 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
FAM200B-201ENST00000422728 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
FAM200B-201ENST00000422728 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
FAM200B-201ENST00000422728 CHL1O00533 1208 aa17.28■□□□□ 0.36
FAM200B-201ENST00000422728 R3HCC1Q9Y3T6 440 aaKnown RBP17.28■□□□□ 0.36
FAM200B-201ENST00000422728 METP08581 1390 aa17.28■□□□□ 0.36
FAM200B-201ENST00000422728 N4BP2Q86UW6 1770 aaPredicted RBP17.27■□□□□ 0.36
FAM200B-201ENST00000422728 ERC2O15083 957 aa17.27■□□□□ 0.36
FAM200B-201ENST00000422728 TMX3Q96JJ7 454 aa17.27■□□□□ 0.36
FAM200B-201ENST00000422728 PDE1AP54750 535 aa17.27■□□□□ 0.35
FAM200B-201ENST00000422728 GLIPR1L2Q4G1C9 344 aa17.27■□□□□ 0.35
FAM200B-201ENST00000422728 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.35
FAM200B-201ENST00000422728 CASC1Q6TDU7 716 aa17.27■□□□□ 0.35
FAM200B-201ENST00000422728 TPM2P07951 284 aa17.26■□□□□ 0.35
FAM200B-201ENST00000422728 PDLIM2Q96JY6 352 aa17.26■□□□□ 0.35
FAM200B-201ENST00000422728 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
FAM200B-201ENST00000422728 ZBTB7CA1YPR0 619 aa17.26■□□□□ 0.35
FAM200B-201ENST00000422728 REC8O95072 547 aa17.26■□□□□ 0.35
FAM200B-201ENST00000422728 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
FAM200B-201ENST00000422728 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms