RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
SEMA4D-208ENST00000422704 F6X3S4 739 aa12.75□□□□□ -0.37
SEMA4D-208ENST00000422704 SRGAP3O43295 1099 aa12.75□□□□□ -0.37
SEMA4D-208ENST00000422704 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-208ENST00000422704 PDILTQ8N807 584 aa12.74□□□□□ -0.37
SEMA4D-208ENST00000422704 HSP90AB4PQ58FF6 505 aa12.74□□□□□ -0.37
SEMA4D-208ENST00000422704 CNTROBQ8N137 903 aa12.74□□□□□ -0.37
SEMA4D-208ENST00000422704 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
SEMA4D-208ENST00000422704 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
SEMA4D-208ENST00000422704 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-208ENST00000422704 SMG6Q86US8 1419 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-208ENST00000422704 ABCA6Q8N139 1617 aa12.73□□□□□ -0.37
SEMA4D-208ENST00000422704 FRMPD1Q5SYB0 1578 aa12.73□□□□□ -0.37
SEMA4D-208ENST00000422704 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
SEMA4D-208ENST00000422704 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-208ENST00000422704 RABEP1Q15276 862 aa12.73□□□□□ -0.37
SEMA4D-208ENST00000422704 RARSP54136 660 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 SKIDA1Q1XH10 827 aa12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 GCC1Q96CN9 775 aa12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 K7ELQ4 463 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 TSHZ3Q63HK5 1081 aa12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
SEMA4D-208ENST00000422704 MADDQ8WXG6 1647 aa12.71□□□□□ -0.37
SEMA4D-208ENST00000422704 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-208ENST00000422704 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.37
SEMA4D-208ENST00000422704 PPRC1Q5VV67 1664 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-208ENST00000422704 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.37
SEMA4D-208ENST00000422704 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.71□□□□□ -0.37
SEMA4D-208ENST00000422704 IGHDP01880 384 aa12.71□□□□□ -0.38
SEMA4D-208ENST00000422704 WDR63Q8IWG1 891 aa12.71□□□□□ -0.38
SEMA4D-208ENST00000422704 USHBP1Q8N6Y0 703 aa12.71□□□□□ -0.38
SEMA4D-208ENST00000422704 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.38
SEMA4D-208ENST00000422704 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.38
SEMA4D-208ENST00000422704 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 DIP2CQ9Y2E4 1556 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 TPM1P09493 284 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 ATF3P18847 181 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 FAM177A1Q8N128 213 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 SRCIN1Q9C0H9 1055 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 LRRFIP1Q32MZ4 808 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 KIAA1210Q9ULL0 1709 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 CEP89Q96ST8 783 aa12.7□□□□□ -0.38
SEMA4D-208ENST00000422704 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 NME9Q86XW9 330 aa12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 MYOM2P54296 1465 aa12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 ERICH2A1L162 156 aa12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 SYCE3A1L190 88 aa12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 SMC2O95347 1197 aa12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
SEMA4D-208ENST00000422704 ADGRF5Q8IZF2 1346 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 ESPNB1AK53 854 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 KINO60870 393 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 AAMPQ13685 434 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 SAFBQ15424 915 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 KIF1BO60333 1816 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 FAM83GA6ND36 823 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 MNS1Q8NEH6 495 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 AACSQ86V21 672 aa12.68□□□□□ -0.38
SEMA4D-208ENST00000422704 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 MBD3O95983 291 aa12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 NAP1L1P55209 391 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 JAKMIP1Q96N16 626 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 TSPY26PQ9H489 355 aa12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 TNNQ9UQP3 1299 aa12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 ABCC3O15438 1527 aa12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 TRIM27P14373 513 aa12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 ME1P48163 572 aa12.67□□□□□ -0.38
SEMA4D-208ENST00000422704 ANXA1P04083 346 aa12.66□□□□□ -0.38
SEMA4D-208ENST00000422704 CAMK4Q16566 473 aa12.66□□□□□ -0.38
SEMA4D-208ENST00000422704 CYP46A1Q9Y6A2 500 aa12.66□□□□□ -0.38
SEMA4D-208ENST00000422704 PSMA5P28066 241 aa12.66□□□□□ -0.38
SEMA4D-208ENST00000422704 FBXO31Q5XUX0 539 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-208ENST00000422704 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
SEMA4D-208ENST00000422704 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
SEMA4D-208ENST00000422704 SSFA2P28290 1259 aa12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 STK38Q15208 465 aa12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 IQGAP1P46940 1657 aa12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 COL17A1Q9UMD9 1497 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 CCDC39Q9UFE4 941 aa12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
SEMA4D-208ENST00000422704 ADGRB3O60242 1522 aa12.65□□□□□ -0.39
SEMA4D-208ENST00000422704 FCHSD2O94868 740 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms