RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 FBLN1P23142 703 aa11.42□□□□□ -0.58
TRIM43CP-201ENST00000422468 NBPF14Q5TI25 921 aa11.42□□□□□ -0.58
TRIM43CP-201ENST00000422468 RGPD2P0DJD1 1756 aa11.41□□□□□ -0.58
TRIM43CP-201ENST00000422468 NHSQ6T4R5 1651 aa11.41□□□□□ -0.58
TRIM43CP-201ENST00000422468 IL2RBP14784 551 aa11.41□□□□□ -0.58
TRIM43CP-201ENST00000422468 MAP3K19Q56UN5 1328 aa11.4□□□□□ -0.58
TRIM43CP-201ENST00000422468 FYB1O15117 783 aa11.4□□□□□ -0.58
TRIM43CP-201ENST00000422468 PTF1AQ7RTS3 328 aa11.4□□□□□ -0.58
TRIM43CP-201ENST00000422468 KAT6BQ8WYB5 2073 aa11.4□□□□□ -0.58
TRIM43CP-201ENST00000422468 HOXC9P31274 260 aa11.39□□□□□ -0.59
TRIM43CP-201ENST00000422468 AMPHP49418 695 aa11.39□□□□□ -0.59
TRIM43CP-201ENST00000422468 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
TRIM43CP-201ENST00000422468 GGNBP2Q9H3C7 697 aa11.39□□□□□ -0.59
TRIM43CP-201ENST00000422468 RTL1A6NKG5 1358 aa11.39□□□□□ -0.59
TRIM43CP-201ENST00000422468 BTAF1O14981 1849 aa11.38□□□□□ -0.59
TRIM43CP-201ENST00000422468 LTV1Q96GA3 475 aaPredicted RBP11.38□□□□□ -0.59
TRIM43CP-201ENST00000422468 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
TRIM43CP-201ENST00000422468 KCNQ2O43526 872 aa11.36□□□□□ -0.59
TRIM43CP-201ENST00000422468 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
TRIM43CP-201ENST00000422468 PROM2Q8N271 834 aa11.36□□□□□ -0.59
TRIM43CP-201ENST00000422468 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 ACSBG1Q96GR2 724 aa11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 CASZ1Q86V15 1759 aa11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 KIF7Q2M1P5 1343 aa11.35□□□□□ -0.59
TRIM43CP-201ENST00000422468 INSRP06213 1382 aa11.34□□□□□ -0.59
TRIM43CP-201ENST00000422468 KIF24Q5T7B8 1368 aa11.34□□□□□ -0.59
TRIM43CP-201ENST00000422468 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
TRIM43CP-201ENST00000422468 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
TRIM43CP-201ENST00000422468 FLT4P35916 1363 aa11.33□□□□□ -0.6
TRIM43CP-201ENST00000422468 DOT1LQ8TEK3 1739 aa11.33□□□□□ -0.6
TRIM43CP-201ENST00000422468 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRIM43CP-201ENST00000422468 DDX54Q8TDD1 881 aaKnown RBP11.33□□□□□ -0.6
TRIM43CP-201ENST00000422468 MEGF6O75095 1541 aa11.33□□□□□ -0.6
TRIM43CP-201ENST00000422468 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 HSP90AB2PQ58FF8 381 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 NBPF6Q5VWK0 638 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 ZCRB1Q8TBF4 217 aaKnown RBP11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 NBPF4Q96M43 638 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 SPON1Q9HCB6 807 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 CGNL1Q0VF96 1302 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
TRIM43CP-201ENST00000422468 PAPPAQ13219 1627 aa11.31□□□□□ -0.6
TRIM43CP-201ENST00000422468 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
TRIM43CP-201ENST00000422468 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
TRIM43CP-201ENST00000422468 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
TRIM43CP-201ENST00000422468 USHBP1Q8N6Y0 703 aa11.3□□□□□ -0.6
TRIM43CP-201ENST00000422468 RAPGEF4Q8WZA2 1011 aa11.3□□□□□ -0.6
TRIM43CP-201ENST00000422468 LY75O60449 1722 aa11.29□□□□□ -0.6
TRIM43CP-201ENST00000422468 TATP17735 454 aaPredicted RBP11.29□□□□□ -0.6
TRIM43CP-201ENST00000422468 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
TRIM43CP-201ENST00000422468 PRIM1P49642 420 aaKnown RBP11.28□□□□□ -0.6
TRIM43CP-201ENST00000422468 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
TRIM43CP-201ENST00000422468 PDGFDQ9GZP0 370 aaPredicted RBP11.28□□□□□ -0.6
TRIM43CP-201ENST00000422468 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
TRIM43CP-201ENST00000422468 QSER1Q2KHR3 1735 aa11.28□□□□□ -0.6
TRIM43CP-201ENST00000422468 PKD1L3Q7Z443 1732 aa11.28□□□□□ -0.6
TRIM43CP-201ENST00000422468 PPM1GO15355 546 aaPredicted RBP11.27□□□□□ -0.61
TRIM43CP-201ENST00000422468 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
TRIM43CP-201ENST00000422468 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.61
TRIM43CP-201ENST00000422468 SYTL4Q96C24 671 aaPredicted RBP11.27□□□□□ -0.61
TRIM43CP-201ENST00000422468 PANK3Q9H999 370 aa11.27□□□□□ -0.61
TRIM43CP-201ENST00000422468 LRRC4BQ9NT99 713 aa11.27□□□□□ -0.61
TRIM43CP-201ENST00000422468 NSD2O96028 1365 aa11.27□□□□□ -0.61
TRIM43CP-201ENST00000422468 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
TRIM43CP-201ENST00000422468 ITGB4P16144 1822 aa11.26□□□□□ -0.61
TRIM43CP-201ENST00000422468 ZBTB7AO95365 584 aa11.26□□□□□ -0.61
TRIM43CP-201ENST00000422468 POLKQ9UBT6 870 aa11.26□□□□□ -0.61
TRIM43CP-201ENST00000422468 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
TRIM43CP-201ENST00000422468 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
TRIM43CP-201ENST00000422468 TUBGCP6Q96RT7 1819 aa11.25□□□□□ -0.61
TRIM43CP-201ENST00000422468 PTGER2P43116 358 aa11.24□□□□□ -0.61
TRIM43CP-201ENST00000422468 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
TRIM43CP-201ENST00000422468 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
TRIM43CP-201ENST00000422468 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
TRIM43CP-201ENST00000422468 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
TRIM43CP-201ENST00000422468 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
TRIM43CP-201ENST00000422468 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
TRIM43CP-201ENST00000422468 CYP27B1O15528 508 aa11.23□□□□□ -0.61
TRIM43CP-201ENST00000422468 EYA1Q99502 592 aa11.23□□□□□ -0.61
TRIM43CP-201ENST00000422468 C5P01031 1676 aa11.22□□□□□ -0.61
TRIM43CP-201ENST00000422468 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
TRIM43CP-201ENST00000422468 TAF1LQ8IZX4 1826 aa11.22□□□□□ -0.61
TRIM43CP-201ENST00000422468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIM43CP-201ENST00000422468 SPG7Q9UQ90 795 aa11.22□□□□□ -0.61
TRIM43CP-201ENST00000422468 KCNQ4P56696 695 aa11.21□□□□□ -0.61
TRIM43CP-201ENST00000422468 EIF4A2Q14240 407 aaKnown RBP11.21□□□□□ -0.61
TRIM43CP-201ENST00000422468 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
TRIM43CP-201ENST00000422468 CCNL1Q9UK58 526 aaPredicted RBP11.21□□□□□ -0.61
TRIM43CP-201ENST00000422468 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 PNPLA7Q6ZV29 1317 aa11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 MORC1Q86VD1 984 aa11.2□□□□□ -0.62
TRIM43CP-201ENST00000422468 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms