RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CHL1O00533 1208 aa19.6■□□□□ 0.73
CDH1-202ENST00000422392 FOXO3O43524 673 aa19.6■□□□□ 0.73
CDH1-202ENST00000422392 TTC22Q5TAA0 569 aa19.6■□□□□ 0.73
CDH1-202ENST00000422392 NRKQ7Z2Y5 1582 aa19.6■□□□□ 0.73
CDH1-202ENST00000422392 PEAK1Q9H792 1746 aa19.6■□□□□ 0.73
CDH1-202ENST00000422392 CEP85Q6P2H3 762 aa19.6■□□□□ 0.73
CDH1-202ENST00000422392 ANKRD44Q8N8A2 993 aa19.6■□□□□ 0.73
CDH1-202ENST00000422392 EIF5BO60841 1220 aaKnown RBP19.59■□□□□ 0.73
CDH1-202ENST00000422392 SSFA2P28290 1259 aa19.59■□□□□ 0.73
CDH1-202ENST00000422392 RIMS1Q86UR5 1692 aaKnown RBP19.59■□□□□ 0.73
CDH1-202ENST00000422392 CIZ1Q9ULV3 898 aaPredicted RBP19.59■□□□□ 0.73
CDH1-202ENST00000422392 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
CDH1-202ENST00000422392 TECPR2O15040 1411 aa19.59■□□□□ 0.73
CDH1-202ENST00000422392 GBP4Q96PP9 640 aa19.58■□□□□ 0.72
CDH1-202ENST00000422392 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
CDH1-202ENST00000422392 GRPEL1Q9HAV7 217 aa19.57■□□□□ 0.72
CDH1-202ENST00000422392 RTL1A6NKG5 1358 aa19.57■□□□□ 0.72
CDH1-202ENST00000422392 GAS2L3Q86XJ1 694 aa19.57■□□□□ 0.72
CDH1-202ENST00000422392 F6X3S4 739 aa19.56■□□□□ 0.72
CDH1-202ENST00000422392 MRE11P49959 708 aa19.56■□□□□ 0.72
CDH1-202ENST00000422392 KIF24Q5T7B8 1368 aa19.56■□□□□ 0.72
CDH1-202ENST00000422392 SLC4A10Q6U841 1118 aa19.56■□□□□ 0.72
CDH1-202ENST00000422392 G2E3Q7L622 706 aa19.56■□□□□ 0.72
CDH1-202ENST00000422392 SDSP20132 328 aa19.55■□□□□ 0.72
CDH1-202ENST00000422392 OVOS2A0A0J9YW53 1432 aa19.55■□□□□ 0.72
CDH1-202ENST00000422392 OVOS2Q6IE36 1432 aa19.55■□□□□ 0.72
CDH1-202ENST00000422392 SIRT1Q96EB6 747 aa19.55■□□□□ 0.72
CDH1-202ENST00000422392 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
CDH1-202ENST00000422392 USP26Q9BXU7 913 aa19.54■□□□□ 0.72
CDH1-202ENST00000422392 MAP3K19Q56UN5 1328 aa19.54■□□□□ 0.72
CDH1-202ENST00000422392 TMEM2Q9UHN6 1383 aa19.54■□□□□ 0.72
CDH1-202ENST00000422392 LTKP29376 864 aa19.53■□□□□ 0.72
CDH1-202ENST00000422392 HDGFP51858 240 aaKnown RBP19.53■□□□□ 0.72
CDH1-202ENST00000422392 SLC26A8Q96RN1 970 aa19.53■□□□□ 0.72
CDH1-202ENST00000422392 MTHFSDQ2M296 383 aaKnown RBP19.53■□□□□ 0.72
CDH1-202ENST00000422392 TNRQ92752 1358 aa19.53■□□□□ 0.72
CDH1-202ENST00000422392 UBR1Q8IWV7 1749 aa19.52■□□□□ 0.72
CDH1-202ENST00000422392 USP6P35125 1406 aa19.52■□□□□ 0.72
CDH1-202ENST00000422392 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
CDH1-202ENST00000422392 CRB1P82279 1406 aa19.52■□□□□ 0.72
CDH1-202ENST00000422392 KIAA0232Q92628 1395 aa19.52■□□□□ 0.72
CDH1-202ENST00000422392 RGPD1P0DJD0 1748 aa19.52■□□□□ 0.71
CDH1-202ENST00000422392 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
CDH1-202ENST00000422392 PTPRCP08575 1304 aa19.51■□□□□ 0.71
CDH1-202ENST00000422392 PKP1Q13835 747 aa19.51■□□□□ 0.71
CDH1-202ENST00000422392 TOPAZ1Q8N9V7 1692 aa19.51■□□□□ 0.71
CDH1-202ENST00000422392 RABEP1Q15276 862 aa19.5■□□□□ 0.71
CDH1-202ENST00000422392 TSHZ3Q63HK5 1081 aa19.5■□□□□ 0.71
CDH1-202ENST00000422392 NALCNQ8IZF0 1738 aa19.5■□□□□ 0.71
CDH1-202ENST00000422392 HAP1P54257 671 aaPredicted RBP19.5■□□□□ 0.71
CDH1-202ENST00000422392 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
CDH1-202ENST00000422392 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
CDH1-202ENST00000422392 NECTIN2Q92692 538 aa19.49■□□□□ 0.71
CDH1-202ENST00000422392 RGPD8O14715 1765 aaPredicted RBP19.49■□□□□ 0.71
CDH1-202ENST00000422392 BAG4O95429 457 aaKnown RBP19.48■□□□□ 0.71
CDH1-202ENST00000422392 RTF1Q92541 710 aaKnown RBP19.48■□□□□ 0.71
CDH1-202ENST00000422392 FMN2Q9NZ56 1722 aa19.48■□□□□ 0.71
CDH1-202ENST00000422392 EXOC6BQ9Y2D4 811 aa19.47■□□□□ 0.71
CDH1-202ENST00000422392 PTPRUQ92729 1446 aa19.46■□□□□ 0.71
CDH1-202ENST00000422392 CEBPAP49715 358 aaPredicted RBP19.46■□□□□ 0.71
CDH1-202ENST00000422392 SKOR2Q2VWA4 1001 aaPredicted RBP19.46■□□□□ 0.71
CDH1-202ENST00000422392 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
CDH1-202ENST00000422392 USP31Q70CQ4 1352 aa19.46■□□□□ 0.71
CDH1-202ENST00000422392 EYA1Q99502 592 aa19.45■□□□□ 0.7
CDH1-202ENST00000422392 DDX49Q9Y6V7 483 aaKnown RBP19.45■□□□□ 0.7
CDH1-202ENST00000422392 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
CDH1-202ENST00000422392 CEP170BQ9Y4F5 1589 aaPredicted RBP19.45■□□□□ 0.7
CDH1-202ENST00000422392 CASC1Q6TDU7 716 aa19.44■□□□□ 0.7
CDH1-202ENST00000422392 ERBB4Q15303 1308 aa19.44■□□□□ 0.7
CDH1-202ENST00000422392 NUTM2GQ5VZR2 741 aa19.44■□□□□ 0.7
CDH1-202ENST00000422392 GOLGA6L22H0YM25 854 aa19.43■□□□□ 0.7
CDH1-202ENST00000422392 AMPHP49418 695 aa19.43■□□□□ 0.7
CDH1-202ENST00000422392 PDE1AP54750 535 aa19.43■□□□□ 0.7
CDH1-202ENST00000422392 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
CDH1-202ENST00000422392 HMMRO75330 724 aa19.43■□□□□ 0.7
CDH1-202ENST00000422392 CHAMP1Q96JM3 812 aa19.43■□□□□ 0.7
CDH1-202ENST00000422392 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
CDH1-202ENST00000422392 SSH2Q76I76 1423 aa19.42■□□□□ 0.7
CDH1-202ENST00000422392 AMOTL2Q9Y2J4 779 aa19.42■□□□□ 0.7
CDH1-202ENST00000422392 ISY1Q9ULR0 285 aaKnown RBP19.41■□□□□ 0.7
CDH1-202ENST00000422392 FLT4P35916 1363 aa19.41■□□□□ 0.7
CDH1-202ENST00000422392 KIF13AQ9H1H9 1805 aa19.41■□□□□ 0.7
CDH1-202ENST00000422392 ERC2O15083 957 aa19.41■□□□□ 0.7
CDH1-202ENST00000422392 NCLP19338 710 aaKnown RBP19.41■□□□□ 0.7
CDH1-202ENST00000422392 CCT4P50991 539 aaKnown RBP19.41■□□□□ 0.7
CDH1-202ENST00000422392 FKBP5Q13451 457 aaPredicted RBP19.41■□□□□ 0.7
CDH1-202ENST00000422392 PNMA6EA0A0J9YXQ4 647 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 CLCN1P35523 988 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 CLEC17AQ6ZS10 378 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 ST18O60284 1047 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 REC8O95072 547 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 GNAI2P04899 355 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 PTMSP20962 102 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 KLHL40Q2TBA0 621 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 STK31Q9BXU1 1019 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 SBNO1A3KN83 1393 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 PLEKHG1Q9ULL1 1385 aa19.4■□□□□ 0.7
CDH1-202ENST00000422392 CYP2E1P05181 493 aaPredicted RBP19.39■□□□□ 0.7
CDH1-202ENST00000422392 FLIIQ13045 1269 aa19.39■□□□□ 0.69
CDH1-202ENST00000422392 FOXD4L5Q5VV16 416 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms