RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 ZSCAN30Q86W11 494 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 SNX21Q969T3 373 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 FCHSD2O94868 740 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 HSPA2P54652 639 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
LINC00899-201ENST00000421538 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
LINC00899-201ENST00000421538 KLHL34Q8N239 644 aa17.33■□□□□ 0.36
LINC00899-201ENST00000421538 PIK3C2AO00443 1686 aa17.33■□□□□ 0.36
LINC00899-201ENST00000421538 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.36
LINC00899-201ENST00000421538 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
LINC00899-201ENST00000421538 TMEM57Q8N5G2 664 aa17.33■□□□□ 0.36
LINC00899-201ENST00000421538 MSNP26038 577 aaKnown RBP17.32■□□□□ 0.36
LINC00899-201ENST00000421538 NASPP49321 788 aaPredicted RBP17.32■□□□□ 0.36
LINC00899-201ENST00000421538 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
LINC00899-201ENST00000421538 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 OFD1O75665 1012 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 RIPK4P57078 832 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
LINC00899-201ENST00000421538 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 PHF8Q9UPP1 1060 aa17.32■□□□□ 0.36
LINC00899-201ENST00000421538 PEAK1Q9H792 1746 aa17.31■□□□□ 0.36
LINC00899-201ENST00000421538 RBM25P49756 843 aaKnown RBP17.31■□□□□ 0.36
LINC00899-201ENST00000421538 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
LINC00899-201ENST00000421538 KDM4FA0A1W2PPD8 638 aa17.31■□□□□ 0.36
LINC00899-201ENST00000421538 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
LINC00899-201ENST00000421538 HSP90AB2PQ58FF8 381 aa17.3■□□□□ 0.36
LINC00899-201ENST00000421538 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
LINC00899-201ENST00000421538 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
LINC00899-201ENST00000421538 NLRP6P59044 892 aa17.29■□□□□ 0.36
LINC00899-201ENST00000421538 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
LINC00899-201ENST00000421538 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
LINC00899-201ENST00000421538 ZBTB40Q9NUA8 1239 aa17.29■□□□□ 0.36
LINC00899-201ENST00000421538 TERF1P54274 439 aa17.28■□□□□ 0.36
LINC00899-201ENST00000421538 ORAI2Q96SN7 254 aa17.28■□□□□ 0.36
LINC00899-201ENST00000421538 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.36
LINC00899-201ENST00000421538 MAP7D2Q96T17 732 aa17.27■□□□□ 0.36
LINC00899-201ENST00000421538 IL16Q14005 1332 aa17.26■□□□□ 0.35
LINC00899-201ENST00000421538 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
LINC00899-201ENST00000421538 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
LINC00899-201ENST00000421538 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
LINC00899-201ENST00000421538 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
LINC00899-201ENST00000421538 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
LINC00899-201ENST00000421538 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
LINC00899-201ENST00000421538 NFE2L2Q16236 605 aa17.24■□□□□ 0.35
LINC00899-201ENST00000421538 DDX49Q9Y6V7 483 aaKnown RBP17.24■□□□□ 0.35
LINC00899-201ENST00000421538 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
LINC00899-201ENST00000421538 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
LINC00899-201ENST00000421538 FAM13BQ9NYF5 915 aa17.23■□□□□ 0.35
LINC00899-201ENST00000421538 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
LINC00899-201ENST00000421538 KCNA4P22459 653 aa17.23■□□□□ 0.35
LINC00899-201ENST00000421538 NUCB1Q02818 461 aa17.23■□□□□ 0.35
LINC00899-201ENST00000421538 PSME1Q06323 249 aa17.23■□□□□ 0.35
LINC00899-201ENST00000421538 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
LINC00899-201ENST00000421538 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
LINC00899-201ENST00000421538 SBNO1A3KN83 1393 aa17.22■□□□□ 0.35
LINC00899-201ENST00000421538 FOXO3O43524 673 aa17.22■□□□□ 0.35
LINC00899-201ENST00000421538 XPCQ01831 940 aaPredicted RBP17.22■□□□□ 0.35
LINC00899-201ENST00000421538 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
LINC00899-201ENST00000421538 FLT4P35916 1363 aa17.21■□□□□ 0.35
LINC00899-201ENST00000421538 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
LINC00899-201ENST00000421538 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.35
LINC00899-201ENST00000421538 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
LINC00899-201ENST00000421538 TMEM94Q12767 1356 aa17.21■□□□□ 0.35
LINC00899-201ENST00000421538 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
LINC00899-201ENST00000421538 SSFA2P28290 1259 aa17.21■□□□□ 0.35
LINC00899-201ENST00000421538 AMPHP49418 695 aa17.21■□□□□ 0.35
LINC00899-201ENST00000421538 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
LINC00899-201ENST00000421538 USP54Q70EL1 1684 aa17.21■□□□□ 0.34
LINC00899-201ENST00000421538 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
LINC00899-201ENST00000421538 LMTK3Q96Q04 1460 aa17.2■□□□□ 0.34
LINC00899-201ENST00000421538 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
LINC00899-201ENST00000421538 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
LINC00899-201ENST00000421538 PRDM4Q9UKN5 801 aa17.19■□□□□ 0.34
LINC00899-201ENST00000421538 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
LINC00899-201ENST00000421538 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
LINC00899-201ENST00000421538 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
LINC00899-201ENST00000421538 PODXL2Q9NZ53 605 aa17.18■□□□□ 0.34
LINC00899-201ENST00000421538 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
LINC00899-201ENST00000421538 BAG4O95429 457 aaKnown RBP17.18■□□□□ 0.34
LINC00899-201ENST00000421538 TSPYL6Q8N831 410 aa17.18■□□□□ 0.34
LINC00899-201ENST00000421538 KIF2CQ99661 725 aa17.18■□□□□ 0.34
LINC00899-201ENST00000421538 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
LINC00899-201ENST00000421538 CD2BP2O95400 341 aaKnown RBP17.17■□□□□ 0.34
LINC00899-201ENST00000421538 HOXC9P31274 260 aa17.17■□□□□ 0.34
LINC00899-201ENST00000421538 NOL7Q9UMY1 257 aaKnown RBP17.17■□□□□ 0.34
LINC00899-201ENST00000421538 ZNF445P59923 1031 aa17.17■□□□□ 0.34
LINC00899-201ENST00000421538 UQCRHLA0A096LP55 91 aa17.16■□□□□ 0.34
LINC00899-201ENST00000421538 ELL2O00472 640 aaPredicted RBP17.16■□□□□ 0.34
LINC00899-201ENST00000421538 ZBTB7BO15156 539 aaPredicted RBP17.16■□□□□ 0.34
LINC00899-201ENST00000421538 ZNF500O60304 480 aaPredicted RBP17.16■□□□□ 0.34
LINC00899-201ENST00000421538 UQCRHP07919 91 aa17.16■□□□□ 0.34
LINC00899-201ENST00000421538 BMP2KLQ5H9B9 411 aa17.16■□□□□ 0.34
LINC00899-201ENST00000421538 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
LINC00899-201ENST00000421538 MTERF4Q7Z6M4 381 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms