RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 NBPF1Q3BBV0 1214 aa10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 MEX3CQ5U5Q3 659 aaKnown RBP10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 ILDR2Q71H61 639 aa10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 NUTM2AQ8IVF1 878 aaPredicted RBP10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 HIRIP3Q9BW71 556 aaPredicted RBP10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 ADGRB1O14514 1584 aa10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 CDC42BPGQ6DT37 1551 aa10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 KNDC1Q76NI1 1749 aa10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 DLC1Q96QB1 1528 aa10.8□□□□□ -0.68
AC012560.1-202ENST00000421324 PCGF6Q9BYE7 350 aa10.8□□□□□ -0.68
AC012560.1-202ENST00000421324 SOS2Q07890 1332 aaPredicted RBP10.8□□□□□ -0.68
AC012560.1-202ENST00000421324 WASLO00401 505 aaPredicted RBP10.79□□□□□ -0.68
AC012560.1-202ENST00000421324 SEMA3EO15041 775 aa10.79□□□□□ -0.68
AC012560.1-202ENST00000421324 CDHR5Q9HBB8 845 aa10.79□□□□□ -0.68
AC012560.1-202ENST00000421324 COL16A1Q07092 1604 aaPredicted RBP10.79□□□□□ -0.68
AC012560.1-202ENST00000421324 TONSLQ96HA7 1378 aa10.78□□□□□ -0.68
AC012560.1-202ENST00000421324 TRIM6-TRIM34B2RNG4 842 aa10.78□□□□□ -0.68
AC012560.1-202ENST00000421324 XPCQ01831 940 aaPredicted RBP10.78□□□□□ -0.68
AC012560.1-202ENST00000421324 PSME1Q06323 249 aa10.78□□□□□ -0.68
AC012560.1-202ENST00000421324 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
AC012560.1-202ENST00000421324 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.68
AC012560.1-202ENST00000421324 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
AC012560.1-202ENST00000421324 NPDC1Q9NQX5 325 aaPredicted RBP10.77□□□□□ -0.69
AC012560.1-202ENST00000421324 PMFBP1Q8TBY8 1022 aa10.76□□□□□ -0.69
AC012560.1-202ENST00000421324 CDK19Q9BWU1 502 aa10.76□□□□□ -0.69
AC012560.1-202ENST00000421324 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
AC012560.1-202ENST00000421324 RGS17Q9UGC6 210 aaPredicted RBP10.76□□□□□ -0.69
AC012560.1-202ENST00000421324 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
AC012560.1-202ENST00000421324 PNPLA6Q8IY17 1366 aa10.76□□□□□ -0.69
AC012560.1-202ENST00000421324 ANKARQ7Z5J8 1434 aa10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 TESPA1A2RU30 521 aaPredicted RBP10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 PRSS12P56730 875 aa10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 MRPL50Q8N5N7 158 aaKnown RBP10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 FAM198AQ9UFP1 575 aa10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 NHSL1Q5SYE7 1610 aa10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 CENPJQ9HC77 1338 aaPredicted RBP10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
AC012560.1-202ENST00000421324 NBPF8Q3BBV2 869 aa10.74□□□□□ -0.69
AC012560.1-202ENST00000421324 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
AC012560.1-202ENST00000421324 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
AC012560.1-202ENST00000421324 NGDNQ8NEJ9 315 aaKnown RBP10.74□□□□□ -0.69
AC012560.1-202ENST00000421324 NUDT16Q96DE0 195 aaKnown RBP10.74□□□□□ -0.69
AC012560.1-202ENST00000421324 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
AC012560.1-202ENST00000421324 FMN2Q9NZ56 1722 aa10.74□□□□□ -0.69
AC012560.1-202ENST00000421324 SOCS7O14512 581 aa10.73□□□□□ -0.69
AC012560.1-202ENST00000421324 ADAMTS2O95450 1211 aa10.73□□□□□ -0.69
AC012560.1-202ENST00000421324 SRPK2P78362 688 aaKnown RBP10.73□□□□□ -0.69
AC012560.1-202ENST00000421324 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
AC012560.1-202ENST00000421324 NGLY1Q96IV0 654 aa10.73□□□□□ -0.69
AC012560.1-202ENST00000421324 GPRASP1Q5JY77 1395 aa10.73□□□□□ -0.69
AC012560.1-202ENST00000421324 SHPRHQ149N8 1683 aa10.73□□□□□ -0.69
AC012560.1-202ENST00000421324 POTEAQ6S8J7 498 aa10.72□□□□□ -0.69
AC012560.1-202ENST00000421324 LAPTM4BQ86VI4 370 aa10.72□□□□□ -0.69
AC012560.1-202ENST00000421324 C8orf37Q96NL8 207 aa10.72□□□□□ -0.69
AC012560.1-202ENST00000421324 CARD11Q9BXL7 1154 aa10.72□□□□□ -0.69
AC012560.1-202ENST00000421324 SPATA31A3Q5VYP0 1347 aa10.72□□□□□ -0.69
AC012560.1-202ENST00000421324 PRR36Q9H6K5 1346 aa10.72□□□□□ -0.69
AC012560.1-202ENST00000421324 ADGRB2O60241 1585 aa10.71□□□□□ -0.69
AC012560.1-202ENST00000421324 LRP6O75581 1613 aa10.71□□□□□ -0.69
AC012560.1-202ENST00000421324 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
AC012560.1-202ENST00000421324 PXDNQ92626 1479 aa10.71□□□□□ -0.69
AC012560.1-202ENST00000421324 RBM27Q9P2N5 1060 aaKnown RBP10.71□□□□□ -0.69
AC012560.1-202ENST00000421324 KIF1AQ12756 1690 aa10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 TULP4Q9NRJ4 1543 aa10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 AFF2P51816 1311 aa10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 EVC2Q86UK5 1308 aa10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 HCSTQ9UBK5 93 aa10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 TIMELESSQ9UNS1 1208 aa10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 ARHGEF28Q8N1W1 1705 aaKnown RBP10.7□□□□□ -0.7
AC012560.1-202ENST00000421324 SBNO1A3KN83 1393 aa10.69□□□□□ -0.7
AC012560.1-202ENST00000421324 C3orf80F5H4A9 247 aa10.69□□□□□ -0.7
AC012560.1-202ENST00000421324 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
AC012560.1-202ENST00000421324 PACS2Q86VP3 889 aa10.69□□□□□ -0.7
AC012560.1-202ENST00000421324 SEPT9Q9UHD8 586 aaPredicted RBP10.69□□□□□ -0.7
AC012560.1-202ENST00000421324 ARHGEF10O15013 1369 aa10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 RGPD8O14715 1765 aaPredicted RBP10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 RXRBP28702 533 aa10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 PTGDRQ13258 359 aa10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 WNT2BQ93097 391 aa10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 QTRT2Q9H974 415 aaKnown RBP10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 TRPM1Q7Z4N2 1603 aa10.68□□□□□ -0.7
AC012560.1-202ENST00000421324 ACEP12821 1306 aa10.67□□□□□ -0.7
AC012560.1-202ENST00000421324 GOLGA8CPA6NN73 597 aa10.67□□□□□ -0.7
AC012560.1-202ENST00000421324 CABLES1Q8TDN4 633 aa10.67□□□□□ -0.7
AC012560.1-202ENST00000421324 ZFRQ96KR1 1074 aaKnown RBP10.67□□□□□ -0.7
AC012560.1-202ENST00000421324 USP21Q9UK80 565 aa10.67□□□□□ -0.7
AC012560.1-202ENST00000421324 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
AC012560.1-202ENST00000421324 USP32Q8NFA0 1604 aa10.66□□□□□ -0.7
AC012560.1-202ENST00000421324 FAM98CQ17RN3 349 aaKnown RBP10.66□□□□□ -0.7
AC012560.1-202ENST00000421324 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
AC012560.1-202ENST00000421324 CABP1Q9NZU7 370 aa10.66□□□□□ -0.7
AC012560.1-202ENST00000421324 SLC24A1O60721 1099 aa10.65□□□□□ -0.7
AC012560.1-202ENST00000421324 PADI6Q6TGC4 694 aa10.65□□□□□ -0.7
AC012560.1-202ENST00000421324 ATP7BP35670 1465 aa10.65□□□□□ -0.7
AC012560.1-202ENST00000421324 RALGAPBQ86X10 1494 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms