RNA–Protein interactions for RNA: ENST00000420947.3

LINC02028-201, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 3 BASIC

Gene LINC02028, Length 528 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-201ENST00000420947 COG6Q9Y2V7 657 aa12□□□□□ -0.49
LINC02028-201ENST00000420947 KDRP35968 1356 aa12□□□□□ -0.49
LINC02028-201ENST00000420947 NPHP4O75161 1426 aaPredicted RBP12□□□□□ -0.49
LINC02028-201ENST00000420947 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
LINC02028-201ENST00000420947 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
LINC02028-201ENST00000420947 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
LINC02028-201ENST00000420947 IPO9Q96P70 1041 aaKnown RBP11.99□□□□□ -0.49
LINC02028-201ENST00000420947 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
LINC02028-201ENST00000420947 NCKAP5LQ9HCH0 1330 aa11.99□□□□□ -0.49
LINC02028-201ENST00000420947 KIF1AQ12756 1690 aa11.99□□□□□ -0.49
LINC02028-201ENST00000420947 MARF1Q9Y4F3 1742 aaKnown RBP11.98□□□□□ -0.49
LINC02028-201ENST00000420947 KIAA0232Q92628 1395 aa11.98□□□□□ -0.49
LINC02028-201ENST00000420947 RRS1Q15050 365 aaKnown RBP11.98□□□□□ -0.49
LINC02028-201ENST00000420947 PANK1Q8TE04 598 aa11.98□□□□□ -0.49
LINC02028-201ENST00000420947 TSR2Q969E8 191 aaKnown RBP11.98□□□□□ -0.49
LINC02028-201ENST00000420947 NCOA3Q9Y6Q9 1424 aa11.97□□□□□ -0.49
LINC02028-201ENST00000420947 HMOX1P09601 288 aa11.97□□□□□ -0.49
LINC02028-201ENST00000420947 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
LINC02028-201ENST00000420947 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
LINC02028-201ENST00000420947 HDAC1Q13547 482 aaPredicted RBP11.96□□□□□ -0.49
LINC02028-201ENST00000420947 KCNH5Q8NCM2 988 aa11.96□□□□□ -0.49
LINC02028-201ENST00000420947 PHACTR3Q96KR7 559 aa11.96□□□□□ -0.49
LINC02028-201ENST00000420947 CHMP4AQ9BY43 222 aa11.96□□□□□ -0.49
LINC02028-201ENST00000420947 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
LINC02028-201ENST00000420947 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
LINC02028-201ENST00000420947 MAP3K19Q56UN5 1328 aa11.95□□□□□ -0.5
LINC02028-201ENST00000420947 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
LINC02028-201ENST00000420947 VAMP4O75379 141 aa11.95□□□□□ -0.5
LINC02028-201ENST00000420947 TRIM27P14373 513 aa11.95□□□□□ -0.5
LINC02028-201ENST00000420947 AMPHP49418 695 aa11.95□□□□□ -0.5
LINC02028-201ENST00000420947 SULT6B1Q6IMI4 303 aa11.95□□□□□ -0.5
LINC02028-201ENST00000420947 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
LINC02028-201ENST00000420947 LTN1O94822 1766 aa11.95□□□□□ -0.5
LINC02028-201ENST00000420947 NLRP6P59044 892 aa11.94□□□□□ -0.5
LINC02028-201ENST00000420947 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
LINC02028-201ENST00000420947 RLBP1P12271 317 aa11.93□□□□□ -0.5
LINC02028-201ENST00000420947 TWISTNBQ3B726 338 aaPredicted RBP11.93□□□□□ -0.5
LINC02028-201ENST00000420947 PROM2Q8N271 834 aa11.93□□□□□ -0.5
LINC02028-201ENST00000420947 RTF1Q92541 710 aaKnown RBP11.93□□□□□ -0.5
LINC02028-201ENST00000420947 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
LINC02028-201ENST00000420947 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
LINC02028-201ENST00000420947 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
LINC02028-201ENST00000420947 NOP58Q9Y2X3 529 aaKnown RBP11.93□□□□□ -0.5
LINC02028-201ENST00000420947 DCCP43146 1447 aa11.93□□□□□ -0.5
LINC02028-201ENST00000420947 MST1RQ04912 1400 aa11.93□□□□□ -0.5
LINC02028-201ENST00000420947 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
LINC02028-201ENST00000420947 CHL1O00533 1208 aa11.92□□□□□ -0.5
LINC02028-201ENST00000420947 FBLN1P23142 703 aa11.92□□□□□ -0.5
LINC02028-201ENST00000420947 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
LINC02028-201ENST00000420947 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
LINC02028-201ENST00000420947 IGHDP01880 384 aa11.91□□□□□ -0.5
LINC02028-201ENST00000420947 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
LINC02028-201ENST00000420947 ITPRIPQ8IWB1 547 aa11.91□□□□□ -0.5
LINC02028-201ENST00000420947 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
LINC02028-201ENST00000420947 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
LINC02028-201ENST00000420947 ZBTB40Q9NUA8 1239 aa11.91□□□□□ -0.5
LINC02028-201ENST00000420947 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
LINC02028-201ENST00000420947 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
LINC02028-201ENST00000420947 PTPRCP08575 1304 aa11.9□□□□□ -0.5
LINC02028-201ENST00000420947 HOXC9P31274 260 aa11.9□□□□□ -0.5
LINC02028-201ENST00000420947 SLIT3O75094 1523 aa11.9□□□□□ -0.5
LINC02028-201ENST00000420947 NFAT5O94916 1531 aa11.9□□□□□ -0.5
LINC02028-201ENST00000420947 ABCC4O15439 1325 aa11.89□□□□□ -0.51
LINC02028-201ENST00000420947 PSME1Q06323 249 aa11.89□□□□□ -0.51
LINC02028-201ENST00000420947 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
LINC02028-201ENST00000420947 GCC1Q96CN9 775 aa11.89□□□□□ -0.51
LINC02028-201ENST00000420947 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
LINC02028-201ENST00000420947 PCDHB15Q9Y5E8 787 aa11.89□□□□□ -0.51
LINC02028-201ENST00000420947 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
LINC02028-201ENST00000420947 CRB1P82279 1406 aa11.88□□□□□ -0.51
LINC02028-201ENST00000420947 ABCC6O95255 1503 aa11.88□□□□□ -0.51
LINC02028-201ENST00000420947 C8orf34Q49A92 452 aa11.88□□□□□ -0.51
LINC02028-201ENST00000420947 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
LINC02028-201ENST00000420947 IP6K1Q92551 441 aa11.88□□□□□ -0.51
LINC02028-201ENST00000420947 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
LINC02028-201ENST00000420947 TRPM3Q9HCF6 1732 aaPredicted RBP11.88□□□□□ -0.51
LINC02028-201ENST00000420947 RGS3P49796 1198 aa11.87□□□□□ -0.51
LINC02028-201ENST00000420947 EYA1Q99502 592 aa11.87□□□□□ -0.51
LINC02028-201ENST00000420947 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
LINC02028-201ENST00000420947 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
LINC02028-201ENST00000420947 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
LINC02028-201ENST00000420947 PDZRN3Q9UPQ7 1066 aa11.86□□□□□ -0.51
LINC02028-201ENST00000420947 N4BP2Q86UW6 1770 aaPredicted RBP11.86□□□□□ -0.51
LINC02028-201ENST00000420947 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
LINC02028-201ENST00000420947 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
LINC02028-201ENST00000420947 LMO7Q8WWI1 1683 aa11.85□□□□□ -0.51
LINC02028-201ENST00000420947 FAM208AQ9UK61 1670 aaKnown RBP11.85□□□□□ -0.51
LINC02028-201ENST00000420947 CAMTA1Q9Y6Y1 1673 aa11.85□□□□□ -0.51
LINC02028-201ENST00000420947 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
LINC02028-201ENST00000420947 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
LINC02028-201ENST00000420947 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
LINC02028-201ENST00000420947 INTS3Q68E01 1043 aaKnown RBP11.85□□□□□ -0.51
LINC02028-201ENST00000420947 C14orf37Q86TY3 774 aa11.85□□□□□ -0.51
LINC02028-201ENST00000420947 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
LINC02028-201ENST00000420947 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
LINC02028-201ENST00000420947 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
LINC02028-201ENST00000420947 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
LINC02028-201ENST00000420947 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
LINC02028-201ENST00000420947 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
LINC02028-201ENST00000420947 ALS2Q96Q42 1657 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms