RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 HOXC9P31274 260 aa23.89■■□□□ 1.42
CROCCP3-202ENST00000420820 GCC1Q96CN9 775 aa23.89■■□□□ 1.42
CROCCP3-202ENST00000420820 DAXXQ9UER7 740 aaPredicted RBP23.89■■□□□ 1.42
CROCCP3-202ENST00000420820 KRT24Q2M2I5 525 aa23.88■■□□□ 1.41
CROCCP3-202ENST00000420820 INTS3Q68E01 1043 aaKnown RBP23.88■■□□□ 1.41
CROCCP3-202ENST00000420820 SIRT2Q8IXJ6 389 aa23.88■■□□□ 1.41
CROCCP3-202ENST00000420820 FOXO3O43524 673 aa23.88■■□□□ 1.41
CROCCP3-202ENST00000420820 CHD1LQ86WJ1 897 aa23.88■■□□□ 1.41
CROCCP3-202ENST00000420820 HTATSF1O43719 755 aaKnown RBP23.87■■□□□ 1.41
CROCCP3-202ENST00000420820 RTL5Q5HYW3 569 aaPredicted RBP23.87■■□□□ 1.41
CROCCP3-202ENST00000420820 GAS2L2Q8NHY3 880 aa23.87■■□□□ 1.41
CROCCP3-202ENST00000420820 ADGRL3Q9HAR2 1447 aa23.87■■□□□ 1.41
CROCCP3-202ENST00000420820 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
CROCCP3-202ENST00000420820 RTL1A6NKG5 1358 aa23.86■■□□□ 1.41
CROCCP3-202ENST00000420820 LTN1O94822 1766 aa23.86■■□□□ 1.41
CROCCP3-202ENST00000420820 UPF2Q9HAU5 1272 aaKnown RBP23.86■■□□□ 1.41
CROCCP3-202ENST00000420820 ABTB2Q8N961 1025 aa23.85■■□□□ 1.41
CROCCP3-202ENST00000420820 C1orf115Q9H7X2 142 aa23.84■■□□□ 1.41
CROCCP3-202ENST00000420820 PTPRCP08575 1304 aa23.84■■□□□ 1.41
CROCCP3-202ENST00000420820 NFAT5O94916 1531 aa23.84■■□□□ 1.41
CROCCP3-202ENST00000420820 RTF1Q92541 710 aaKnown RBP23.83■■□□□ 1.41
CROCCP3-202ENST00000420820 PHRF1Q9P1Y6 1649 aaKnown RBP23.83■■□□□ 1.4
CROCCP3-202ENST00000420820 LNPKQ9C0E8 428 aa23.82■■□□□ 1.4
CROCCP3-202ENST00000420820 DEKP35659 375 aaKnown RBP23.82■■□□□ 1.4
CROCCP3-202ENST00000420820 NUTM2GQ5VZR2 741 aa23.82■■□□□ 1.4
CROCCP3-202ENST00000420820 NPHP4O75161 1426 aaPredicted RBP23.8■■□□□ 1.4
CROCCP3-202ENST00000420820 TSPYL4Q9UJ04 414 aa23.79■■□□□ 1.4
CROCCP3-202ENST00000420820 ATP10DQ9P241 1426 aa23.79■■□□□ 1.4
CROCCP3-202ENST00000420820 BECN1Q14457 450 aa23.78■■□□□ 1.4
CROCCP3-202ENST00000420820 MIS18AQ9NYP9 233 aa23.78■■□□□ 1.4
CROCCP3-202ENST00000420820 BMP2KLQ5H9B9 411 aa23.78■■□□□ 1.4
CROCCP3-202ENST00000420820 GNAT3A8MTJ3 354 aa23.77■■□□□ 1.4
CROCCP3-202ENST00000420820 ANKRD45Q5TZF3 282 aa23.77■■□□□ 1.4
CROCCP3-202ENST00000420820 IP6K1Q92551 441 aa23.76■■□□□ 1.39
CROCCP3-202ENST00000420820 MSH6P52701 1360 aa23.76■■□□□ 1.39
CROCCP3-202ENST00000420820 CACNA1FO60840 1977 aa23.76■■□□□ 1.39
CROCCP3-202ENST00000420820 NFKBIBQ15653 356 aa23.75■■□□□ 1.39
CROCCP3-202ENST00000420820 DCTPP1Q9H773 170 aa23.75■■□□□ 1.39
CROCCP3-202ENST00000420820 BABAM1Q9NWV8 329 aa23.75■■□□□ 1.39
CROCCP3-202ENST00000420820 FAM208AQ9UK61 1670 aaKnown RBP23.75■■□□□ 1.39
CROCCP3-202ENST00000420820 MAP3K5Q99683 1374 aa23.75■■□□□ 1.39
CROCCP3-202ENST00000420820 SLC4A2P04920 1241 aa23.74■■□□□ 1.39
CROCCP3-202ENST00000420820 ANKRD44Q8N8A2 993 aa23.74■■□□□ 1.39
CROCCP3-202ENST00000420820 RBM33Q96EV2 1170 aaKnown RBP23.74■■□□□ 1.39
CROCCP3-202ENST00000420820 C22orf23Q9BZE7 217 aa23.74■■□□□ 1.39
CROCCP3-202ENST00000420820 SOS1Q07889 1333 aaPredicted RBP23.73■■□□□ 1.39
CROCCP3-202ENST00000420820 RPAP2Q8IXW5 612 aaPredicted RBP23.73■■□□□ 1.39
CROCCP3-202ENST00000420820 IL17REQ8NFR9 667 aa23.73■■□□□ 1.39
CROCCP3-202ENST00000420820 ESCO1Q5FWF5 840 aa23.71■■□□□ 1.39
CROCCP3-202ENST00000420820 SLIT3O75094 1523 aa23.71■■□□□ 1.39
CROCCP3-202ENST00000420820 MFAP1P55081 439 aaKnown RBP23.71■■□□□ 1.39
CROCCP3-202ENST00000420820 G2E3Q7L622 706 aa23.71■■□□□ 1.39
CROCCP3-202ENST00000420820 KCNH5Q8NCM2 988 aa23.71■■□□□ 1.39
CROCCP3-202ENST00000420820 TBC1D2Q9BYX2 928 aa23.71■■□□□ 1.39
CROCCP3-202ENST00000420820 N4BP2Q86UW6 1770 aaPredicted RBP23.7■■□□□ 1.38
CROCCP3-202ENST00000420820 MED1Q15648 1581 aaPredicted RBP23.7■■□□□ 1.38
CROCCP3-202ENST00000420820 PSME1Q06323 249 aa23.7■■□□□ 1.38
CROCCP3-202ENST00000420820 CEP85Q6P2H3 762 aa23.7■■□□□ 1.38
CROCCP3-202ENST00000420820 RGPD2P0DJD1 1756 aa23.69■■□□□ 1.38
CROCCP3-202ENST00000420820 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
CROCCP3-202ENST00000420820 LTV1Q96GA3 475 aaPredicted RBP23.69■■□□□ 1.38
CROCCP3-202ENST00000420820 TRPM3Q9HCF6 1732 aaPredicted RBP23.68■■□□□ 1.38
CROCCP3-202ENST00000420820 CEMIPQ8WUJ3 1361 aa23.68■■□□□ 1.38
CROCCP3-202ENST00000420820 RBM25P49756 843 aaKnown RBP23.68■■□□□ 1.38
CROCCP3-202ENST00000420820 MEIS3Q99687 375 aa23.68■■□□□ 1.38
CROCCP3-202ENST00000420820 ANTXR1Q9H6X2 564 aa23.68■■□□□ 1.38
CROCCP3-202ENST00000420820 TAF7Q15545 349 aaPredicted RBP23.67■■□□□ 1.38
CROCCP3-202ENST00000420820 NCAPD2Q15021 1401 aa23.67■■□□□ 1.38
CROCCP3-202ENST00000420820 CCT4P50991 539 aaKnown RBP23.67■■□□□ 1.38
CROCCP3-202ENST00000420820 LMO7Q8WWI1 1683 aa23.66■■□□□ 1.38
CROCCP3-202ENST00000420820 NBPF6Q5VWK0 638 aa23.66■■□□□ 1.38
CROCCP3-202ENST00000420820 NBPF4Q96M43 638 aa23.66■■□□□ 1.38
CROCCP3-202ENST00000420820 CCDC30Q5VVM6 783 aa23.65■■□□□ 1.38
CROCCP3-202ENST00000420820 PLEKHM2Q8IWE5 1019 aa23.65■■□□□ 1.38
CROCCP3-202ENST00000420820 USHBP1Q8N6Y0 703 aa23.65■■□□□ 1.38
CROCCP3-202ENST00000420820 STK31Q9BXU1 1019 aa23.64■■□□□ 1.37
CROCCP3-202ENST00000420820 KDM3BQ7LBC6 1761 aa23.64■■□□□ 1.37
CROCCP3-202ENST00000420820 KIF1AQ12756 1690 aa23.64■■□□□ 1.37
CROCCP3-202ENST00000420820 ORAI2Q96SN7 254 aa23.63■■□□□ 1.37
CROCCP3-202ENST00000420820 CAMTA1Q9Y6Y1 1673 aa23.63■■□□□ 1.37
CROCCP3-202ENST00000420820 MST1RQ04912 1400 aa23.63■■□□□ 1.37
CROCCP3-202ENST00000420820 F6X3S4 739 aa23.62■■□□□ 1.37
CROCCP3-202ENST00000420820 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
CROCCP3-202ENST00000420820 FLIIQ13045 1269 aa23.61■■□□□ 1.37
CROCCP3-202ENST00000420820 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
CROCCP3-202ENST00000420820 TBC1D9Q6ZT07 1266 aa23.61■■□□□ 1.37
CROCCP3-202ENST00000420820 PXDNLA1KZ92 1463 aa23.61■■□□□ 1.37
CROCCP3-202ENST00000420820 GCP02774 474 aa23.6■■□□□ 1.37
CROCCP3-202ENST00000420820 GSPT1P15170 499 aaKnown RBP23.6■■□□□ 1.37
CROCCP3-202ENST00000420820 FRAT2O75474 233 aaPredicted RBP23.59■■□□□ 1.37
CROCCP3-202ENST00000420820 C1orf167Q5SNV9 1468 aa23.58■■□□□ 1.37
CROCCP3-202ENST00000420820 TTC22Q5TAA0 569 aa23.57■■□□□ 1.36
CROCCP3-202ENST00000420820 SLC4A10Q6U841 1118 aa23.57■■□□□ 1.36
CROCCP3-202ENST00000420820 ALS2Q96Q42 1657 aa23.56■■□□□ 1.36
CROCCP3-202ENST00000420820 HMMRO75330 724 aa23.56■■□□□ 1.36
CROCCP3-202ENST00000420820 CDC45O75419 566 aa23.56■■□□□ 1.36
CROCCP3-202ENST00000420820 C16orf71Q8IYS4 520 aaPredicted RBP23.56■■□□□ 1.36
CROCCP3-202ENST00000420820 SNX21Q969T3 373 aa23.56■■□□□ 1.36
CROCCP3-202ENST00000420820 KIF2CQ99661 725 aa23.55■■□□□ 1.36
CROCCP3-202ENST00000420820 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms