RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
PTPN18-204ENST00000420717 USHBP1Q8N6Y0 703 aa19.52■□□□□ 0.72
PTPN18-204ENST00000420717 RALBP1Q15311 655 aa19.5■□□□□ 0.71
PTPN18-204ENST00000420717 RAPGEF4Q8WZA2 1011 aa19.5■□□□□ 0.71
PTPN18-204ENST00000420717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
PTPN18-204ENST00000420717 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
PTPN18-204ENST00000420717 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
PTPN18-204ENST00000420717 DIAPH1O60610 1272 aaKnown RBP19.47■□□□□ 0.71
PTPN18-204ENST00000420717 FAM182BQ5T319 152 aa19.47■□□□□ 0.71
PTPN18-204ENST00000420717 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
PTPN18-204ENST00000420717 PCDH11XQ9BZA7 1347 aa19.47■□□□□ 0.71
PTPN18-204ENST00000420717 PCDH11YQ9BZA8 1340 aa19.47■□□□□ 0.71
PTPN18-204ENST00000420717 RREB1Q92766 1687 aa19.46■□□□□ 0.71
PTPN18-204ENST00000420717 TOGARAM1Q9Y4F4 1720 aa19.46■□□□□ 0.71
PTPN18-204ENST00000420717 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
PTPN18-204ENST00000420717 BTAF1O14981 1849 aa19.43■□□□□ 0.7
PTPN18-204ENST00000420717 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
PTPN18-204ENST00000420717 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
PTPN18-204ENST00000420717 CNGB1Q14028 1251 aaPredicted RBP19.42■□□□□ 0.7
PTPN18-204ENST00000420717 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
PTPN18-204ENST00000420717 BCL11BQ9C0K0 894 aaPredicted RBP19.42■□□□□ 0.7
PTPN18-204ENST00000420717 PRKRIP1Q9H875 184 aaPredicted RBP19.42■□□□□ 0.7
PTPN18-204ENST00000420717 CYP27B1O15528 508 aa19.41■□□□□ 0.7
PTPN18-204ENST00000420717 NKX1-1Q15270 411 aaPredicted RBP19.41■□□□□ 0.7
PTPN18-204ENST00000420717 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
PTPN18-204ENST00000420717 SPG7Q9UQ90 795 aa19.41■□□□□ 0.7
PTPN18-204ENST00000420717 TRIM37O94972 964 aa19.39■□□□□ 0.69
PTPN18-204ENST00000420717 SF3B2Q13435 895 aaKnown RBP19.39■□□□□ 0.69
PTPN18-204ENST00000420717 AMOTQ4VCS5 1084 aa19.39■□□□□ 0.69
PTPN18-204ENST00000420717 NUP188Q5SRE5 1749 aa19.39■□□□□ 0.69
PTPN18-204ENST00000420717 ITGB4P16144 1822 aa19.39■□□□□ 0.69
PTPN18-204ENST00000420717 BAG6P46379 1132 aa19.38■□□□□ 0.69
PTPN18-204ENST00000420717 DDX54Q8TDD1 881 aaKnown RBP19.38■□□□□ 0.69
PTPN18-204ENST00000420717 SCN11AQ9UI33 1791 aa19.37■□□□□ 0.69
PTPN18-204ENST00000420717 LY75O60449 1722 aa19.37■□□□□ 0.69
PTPN18-204ENST00000420717 PHKG2P15735 406 aa19.36■□□□□ 0.69
PTPN18-204ENST00000420717 PLEKHO1Q53GL0 409 aaPredicted RBP19.36■□□□□ 0.69
PTPN18-204ENST00000420717 NUDCQ9Y266 331 aa19.36■□□□□ 0.69
PTPN18-204ENST00000420717 VIRMAQ69YN4 1812 aaKnown RBP19.35■□□□□ 0.69
PTPN18-204ENST00000420717 PLSCR1O15162 318 aa19.35■□□□□ 0.69
PTPN18-204ENST00000420717 IFNL2Q8IZJ0 200 aa19.35■□□□□ 0.69
PTPN18-204ENST00000420717 MRC1P22897 1456 aa19.35■□□□□ 0.69
PTPN18-204ENST00000420717 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
PTPN18-204ENST00000420717 CAMKK2Q96RR4 588 aa19.34■□□□□ 0.69
PTPN18-204ENST00000420717 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
PTPN18-204ENST00000420717 HMOX1P09601 288 aa19.33■□□□□ 0.68
PTPN18-204ENST00000420717 PTF1AQ7RTS3 328 aa19.33■□□□□ 0.68
PTPN18-204ENST00000420717 DEFB132Q7Z7B7 95 aa19.33■□□□□ 0.68
PTPN18-204ENST00000420717 PAPPAQ13219 1627 aa19.33■□□□□ 0.68
PTPN18-204ENST00000420717 U2SURPO15042 1029 aaKnown RBP19.32■□□□□ 0.68
PTPN18-204ENST00000420717 KCNQ2O43526 872 aa19.32■□□□□ 0.68
PTPN18-204ENST00000420717 FCHSD2O94868 740 aa19.31■□□□□ 0.68
PTPN18-204ENST00000420717 APBA3O96018 575 aa19.31■□□□□ 0.68
PTPN18-204ENST00000420717 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
PTPN18-204ENST00000420717 ZNF530Q6P9A1 599 aaPredicted RBP19.3■□□□□ 0.68
PTPN18-204ENST00000420717 ACSBG1Q96GR2 724 aa19.3■□□□□ 0.68
PTPN18-204ENST00000420717 DCAF5Q96JK2 942 aa19.3■□□□□ 0.68
PTPN18-204ENST00000420717 ZNF831Q5JPB2 1677 aa19.3■□□□□ 0.68
PTPN18-204ENST00000420717 EN1Q05925 392 aaPredicted RBP19.29■□□□□ 0.68
PTPN18-204ENST00000420717 CICQ96RK0 1608 aaPredicted RBP19.29■□□□□ 0.68
PTPN18-204ENST00000420717 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
PTPN18-204ENST00000420717 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
PTPN18-204ENST00000420717 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTPN18-204ENST00000420717 AKAP4Q5JQC9 854 aa19.28■□□□□ 0.68
PTPN18-204ENST00000420717 SIPA1L3O60292 1781 aaPredicted RBP19.28■□□□□ 0.68
PTPN18-204ENST00000420717 KAT6BQ8WYB5 2073 aa19.28■□□□□ 0.68
PTPN18-204ENST00000420717 ERVV-2B6SEH9 535 aa19.27■□□□□ 0.68
PTPN18-204ENST00000420717 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
PTPN18-204ENST00000420717 EZH2Q15910 746 aaKnown RBP19.26■□□□□ 0.67
PTPN18-204ENST00000420717 MTHFSDQ2M296 383 aaKnown RBP19.26■□□□□ 0.67
PTPN18-204ENST00000420717 C1orf141Q5JVX7 400 aa19.26■□□□□ 0.67
PTPN18-204ENST00000420717 GAS2L2Q8NHY3 880 aa19.26■□□□□ 0.67
PTPN18-204ENST00000420717 MAP3K5Q99683 1374 aa19.25■□□□□ 0.67
PTPN18-204ENST00000420717 DLG5Q8TDM6 1919 aa19.24■□□□□ 0.67
PTPN18-204ENST00000420717 PHACTR3Q96KR7 559 aa19.24■□□□□ 0.67
PTPN18-204ENST00000420717 PLEKHF1Q96S99 279 aa19.24■□□□□ 0.67
PTPN18-204ENST00000420717 QSER1Q2KHR3 1735 aa19.23■□□□□ 0.67
PTPN18-204ENST00000420717 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
PTPN18-204ENST00000420717 PROM2Q8N271 834 aa19.23■□□□□ 0.67
PTPN18-204ENST00000420717 TAF1LQ8IZX4 1826 aa19.23■□□□□ 0.67
PTPN18-204ENST00000420717 UBR2Q8IWV8 1755 aa19.22■□□□□ 0.67
PTPN18-204ENST00000420717 C5P01031 1676 aa19.22■□□□□ 0.67
PTPN18-204ENST00000420717 ANP32CO43423 234 aa19.22■□□□□ 0.67
PTPN18-204ENST00000420717 TXNRD1Q16881 649 aa19.21■□□□□ 0.67
PTPN18-204ENST00000420717 SLC27A3Q5K4L6 730 aa19.21■□□□□ 0.67
PTPN18-204ENST00000420717 PIGBQ92521 554 aa19.21■□□□□ 0.67
PTPN18-204ENST00000420717 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
PTPN18-204ENST00000420717 PNNQ9H307 717 aaKnown RBP19.21■□□□□ 0.67
PTPN18-204ENST00000420717 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
PTPN18-204ENST00000420717 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
PTPN18-204ENST00000420717 MPRIPQ6WCQ1 1025 aa19.19■□□□□ 0.66
PTPN18-204ENST00000420717 SMARCC1Q92922 1105 aaPredicted RBP19.19■□□□□ 0.66
PTPN18-204ENST00000420717 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
PTPN18-204ENST00000420717 RNMTO43148 476 aaKnown RBP19.18■□□□□ 0.66
PTPN18-204ENST00000420717 COL5A3P25940 1745 aaPredicted RBP19.17■□□□□ 0.66
PTPN18-204ENST00000420717 CASZ1Q86V15 1759 aa19.17■□□□□ 0.66
PTPN18-204ENST00000420717 HTATSF1O43719 755 aaKnown RBP19.17■□□□□ 0.66
PTPN18-204ENST00000420717 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
PTPN18-204ENST00000420717 TUBGCP6Q96RT7 1819 aa19.16■□□□□ 0.66
PTPN18-204ENST00000420717 KCPQ6ZWJ8 1503 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms