RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 RAPGEF4Q8WZA2 1011 aa22.44■■□□□ 1.18
SEC22C-206ENST00000420163 TATP17735 454 aaPredicted RBP22.43■■□□□ 1.18
SEC22C-206ENST00000420163 IL13P35225 146 aa22.43■■□□□ 1.18
SEC22C-206ENST00000420163 PARD3Q8TEW0 1356 aa22.42■■□□□ 1.18
SEC22C-206ENST00000420163 PTF1AQ7RTS3 328 aa22.42■■□□□ 1.18
SEC22C-206ENST00000420163 ZCRB1Q8TBF4 217 aaKnown RBP22.42■■□□□ 1.18
SEC22C-206ENST00000420163 PPP2R1AP30153 589 aa22.41■■□□□ 1.18
SEC22C-206ENST00000420163 DDX54Q8TDD1 881 aaKnown RBP22.41■■□□□ 1.18
SEC22C-206ENST00000420163 SF3B2Q13435 895 aaKnown RBP22.4■■□□□ 1.18
SEC22C-206ENST00000420163 AEBP1Q8IUX7 1158 aa22.4■■□□□ 1.18
SEC22C-206ENST00000420163 BTAF1O14981 1849 aa22.38■■□□□ 1.17
SEC22C-206ENST00000420163 TOGARAM1Q9Y4F4 1720 aa22.38■■□□□ 1.17
SEC22C-206ENST00000420163 ZNF316A6NFI3 1004 aaPredicted RBP22.38■■□□□ 1.17
SEC22C-206ENST00000420163 RREB1Q92766 1687 aa22.36■■□□□ 1.17
SEC22C-206ENST00000420163 DIAPH1O60610 1272 aaKnown RBP22.36■■□□□ 1.17
SEC22C-206ENST00000420163 ACSBG1Q96GR2 724 aa22.36■■□□□ 1.17
SEC22C-206ENST00000420163 KDRP35968 1356 aa22.36■■□□□ 1.17
SEC22C-206ENST00000420163 RGPD3A6NKT7 1758 aaPredicted RBP22.35■■□□□ 1.17
SEC22C-206ENST00000420163 RGPD4Q7Z3J3 1758 aa22.35■■□□□ 1.17
SEC22C-206ENST00000420163 KCNQ2O43526 872 aa22.35■■□□□ 1.17
SEC22C-206ENST00000420163 APBA3O96018 575 aa22.35■■□□□ 1.17
SEC22C-206ENST00000420163 BAG6P46379 1132 aa22.35■■□□□ 1.17
SEC22C-206ENST00000420163 EN1Q05925 392 aaPredicted RBP22.35■■□□□ 1.17
SEC22C-206ENST00000420163 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
SEC22C-206ENST00000420163 PCDH11XQ9BZA7 1347 aa22.34■■□□□ 1.17
SEC22C-206ENST00000420163 PCDH11YQ9BZA8 1340 aa22.34■■□□□ 1.17
SEC22C-206ENST00000420163 ITGB4P16144 1822 aa22.34■■□□□ 1.17
SEC22C-206ENST00000420163 CYP27B1O15528 508 aa22.34■■□□□ 1.17
SEC22C-206ENST00000420163 BCL11BQ9C0K0 894 aaPredicted RBP22.33■■□□□ 1.17
SEC22C-206ENST00000420163 NUP188Q5SRE5 1749 aa22.33■■□□□ 1.17
SEC22C-206ENST00000420163 HMOX1P09601 288 aa22.31■■□□□ 1.16
SEC22C-206ENST00000420163 PLEKHG2Q9H7P9 1386 aa22.3■■□□□ 1.16
SEC22C-206ENST00000420163 EZH2Q15910 746 aaKnown RBP22.3■■□□□ 1.16
SEC22C-206ENST00000420163 CAMKK2Q96RR4 588 aa22.3■■□□□ 1.16
SEC22C-206ENST00000420163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.3■■□□□ 1.16
SEC22C-206ENST00000420163 SPG7Q9UQ90 795 aa22.3■■□□□ 1.16
SEC22C-206ENST00000420163 VIRMAQ69YN4 1812 aaKnown RBP22.29■■□□□ 1.16
SEC22C-206ENST00000420163 CFAP53Q96M91 514 aa22.29■■□□□ 1.16
SEC22C-206ENST00000420163 U2SURPO15042 1029 aaKnown RBP22.28■■□□□ 1.16
SEC22C-206ENST00000420163 RALBP1Q15311 655 aa22.27■■□□□ 1.16
SEC22C-206ENST00000420163 PHKG2P15735 406 aa22.26■■□□□ 1.15
SEC22C-206ENST00000420163 PRIM1P49642 420 aaKnown RBP22.26■■□□□ 1.15
SEC22C-206ENST00000420163 NKX1-1Q15270 411 aaPredicted RBP22.24■■□□□ 1.15
SEC22C-206ENST00000420163 PLEKHO1Q53GL0 409 aaPredicted RBP22.24■■□□□ 1.15
SEC22C-206ENST00000420163 SYTL4Q96C24 671 aaPredicted RBP22.24■■□□□ 1.15
SEC22C-206ENST00000420163 LY75O60449 1722 aa22.23■■□□□ 1.15
SEC22C-206ENST00000420163 SCN11AQ9UI33 1791 aa22.23■■□□□ 1.15
SEC22C-206ENST00000420163 PLSCR1O15162 318 aa22.23■■□□□ 1.15
SEC22C-206ENST00000420163 ZNF530Q6P9A1 599 aaPredicted RBP22.23■■□□□ 1.15
SEC22C-206ENST00000420163 IFNL2Q8IZJ0 200 aa22.23■■□□□ 1.15
SEC22C-206ENST00000420163 AMOTQ4VCS5 1084 aa22.22■■□□□ 1.15
SEC22C-206ENST00000420163 PRKRIP1Q9H875 184 aaPredicted RBP22.22■■□□□ 1.15
SEC22C-206ENST00000420163 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
SEC22C-206ENST00000420163 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
SEC22C-206ENST00000420163 PROM2Q8N271 834 aa22.21■■□□□ 1.15
SEC22C-206ENST00000420163 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
SEC22C-206ENST00000420163 RSPH6AQ9H0K4 717 aa22.19■■□□□ 1.14
SEC22C-206ENST00000420163 ADAMTS7Q9UKP4 1686 aa22.18■■□□□ 1.14
SEC22C-206ENST00000420163 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
SEC22C-206ENST00000420163 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
SEC22C-206ENST00000420163 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
SEC22C-206ENST00000420163 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
SEC22C-206ENST00000420163 MTHFSDQ2M296 383 aaKnown RBP22.17■■□□□ 1.14
SEC22C-206ENST00000420163 MPRIPQ6WCQ1 1025 aa22.17■■□□□ 1.14
SEC22C-206ENST00000420163 TXNRD1Q16881 649 aa22.16■■□□□ 1.14
SEC22C-206ENST00000420163 C1orf141Q5JVX7 400 aa22.15■■□□□ 1.14
SEC22C-206ENST00000420163 PIGBQ92521 554 aa22.15■■□□□ 1.14
SEC22C-206ENST00000420163 PHACTR3Q96KR7 559 aa22.15■■□□□ 1.14
SEC22C-206ENST00000420163 DCAF5Q96JK2 942 aa22.14■■□□□ 1.13
SEC22C-206ENST00000420163 DLG5Q8TDM6 1919 aa22.14■■□□□ 1.13
SEC22C-206ENST00000420163 HSP90AB1P08238 724 aaKnown RBP22.13■■□□□ 1.13
SEC22C-206ENST00000420163 AKAP4Q5JQC9 854 aa22.13■■□□□ 1.13
SEC22C-206ENST00000420163 TAF1LQ8IZX4 1826 aa22.13■■□□□ 1.13
SEC22C-206ENST00000420163 PSDA5PKW4 1024 aaPredicted RBP22.12■■□□□ 1.13
SEC22C-206ENST00000420163 ANO8Q9HCE9 1232 aaPredicted RBP22.12■■□□□ 1.13
SEC22C-206ENST00000420163 FCHSD2O94868 740 aa22.11■■□□□ 1.13
SEC22C-206ENST00000420163 KCNQ4P56696 695 aa22.11■■□□□ 1.13
SEC22C-206ENST00000420163 LRRC4BQ9NT99 713 aa22.11■■□□□ 1.13
SEC22C-206ENST00000420163 TMOD3Q9NYL9 352 aa22.11■■□□□ 1.13
SEC22C-206ENST00000420163 TUBGCP6Q96RT7 1819 aa22.1■■□□□ 1.13
SEC22C-206ENST00000420163 MRC1P22897 1456 aa22.1■■□□□ 1.13
SEC22C-206ENST00000420163 R3HDM1Q15032 1099 aaKnown RBP22.1■■□□□ 1.13
SEC22C-206ENST00000420163 C5P01031 1676 aa22.1■■□□□ 1.13
SEC22C-206ENST00000420163 PALLDQ8WX93 1383 aa22.1■■□□□ 1.13
SEC22C-206ENST00000420163 SIPA1L3O60292 1781 aaPredicted RBP22.1■■□□□ 1.13
SEC22C-206ENST00000420163 ERVV-2B6SEH9 535 aa22.09■■□□□ 1.13
SEC22C-206ENST00000420163 LGR6Q9HBX8 967 aa22.09■■□□□ 1.13
SEC22C-206ENST00000420163 GAS2L2Q8NHY3 880 aa22.08■■□□□ 1.13
SEC22C-206ENST00000420163 ASAP1Q9ULH1 1129 aa22.08■■□□□ 1.13
SEC22C-206ENST00000420163 MAP3K5Q99683 1374 aa22.08■■□□□ 1.12
SEC22C-206ENST00000420163 RNMTO43148 476 aaKnown RBP22.07■■□□□ 1.12
SEC22C-206ENST00000420163 NBPF14Q5TI25 921 aa22.06■■□□□ 1.12
SEC22C-206ENST00000420163 CASZ1Q86V15 1759 aa22.05■■□□□ 1.12
SEC22C-206ENST00000420163 CABP4P57796 275 aa22.05■■□□□ 1.12
SEC22C-206ENST00000420163 SLC27A3Q5K4L6 730 aa22.05■■□□□ 1.12
SEC22C-206ENST00000420163 PLEKHF1Q96S99 279 aa22.05■■□□□ 1.12
SEC22C-206ENST00000420163 ATG3Q9NT62 314 aa22.05■■□□□ 1.12
SEC22C-206ENST00000420163 CCNL1Q9UK58 526 aaPredicted RBP22.05■■□□□ 1.12
SEC22C-206ENST00000420163 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
SEC22C-206ENST00000420163 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms