RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
LINC00402-201ENST00000419499 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
LINC00402-201ENST00000419499 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
LINC00402-201ENST00000419499 TMEM57Q8N5G2 664 aa12.52□□□□□ -0.41
LINC00402-201ENST00000419499 DDX19BQ9UMR2 479 aa12.52□□□□□ -0.41
LINC00402-201ENST00000419499 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
LINC00402-201ENST00000419499 FTSJ3Q8IY81 847 aaKnown RBP12.5□□□□□ -0.41
LINC00402-201ENST00000419499 PKD1L3Q7Z443 1732 aa12.5□□□□□ -0.41
LINC00402-201ENST00000419499 CEMIPQ8WUJ3 1361 aa12.5□□□□□ -0.41
LINC00402-201ENST00000419499 HTATSF1O43719 755 aaKnown RBP12.5□□□□□ -0.41
LINC00402-201ENST00000419499 MCM10Q7L590 875 aa12.5□□□□□ -0.41
LINC00402-201ENST00000419499 IP6K1Q92551 441 aa12.5□□□□□ -0.41
LINC00402-201ENST00000419499 FOXO3O43524 673 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 AMPHP49418 695 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 ORAI2Q96SN7 254 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 OVOS2A0A0G2JMS6 1433 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 SOX12O15370 315 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 MAP3K5Q99683 1374 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 IPO8O15397 1037 aaKnown RBP12.49□□□□□ -0.41
LINC00402-201ENST00000419499 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
LINC00402-201ENST00000419499 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
LINC00402-201ENST00000419499 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
LINC00402-201ENST00000419499 TMEM94Q12767 1356 aa12.48□□□□□ -0.41
LINC00402-201ENST00000419499 SCN11AQ9UI33 1791 aa12.48□□□□□ -0.41
LINC00402-201ENST00000419499 LAS1LQ9Y4W2 734 aaKnown RBP12.48□□□□□ -0.41
LINC00402-201ENST00000419499 ATP10DQ9P241 1426 aa12.47□□□□□ -0.41
LINC00402-201ENST00000419499 KCNH5Q8NCM2 988 aa12.47□□□□□ -0.41
LINC00402-201ENST00000419499 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
LINC00402-201ENST00000419499 ZBTB7BO15156 539 aaPredicted RBP12.47□□□□□ -0.41
LINC00402-201ENST00000419499 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
LINC00402-201ENST00000419499 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
LINC00402-201ENST00000419499 C19orf44Q9H6X5 657 aa12.47□□□□□ -0.41
LINC00402-201ENST00000419499 TUBGCP6Q96RT7 1819 aa12.47□□□□□ -0.41
LINC00402-201ENST00000419499 IPO9Q96P70 1041 aaKnown RBP12.46□□□□□ -0.41
LINC00402-201ENST00000419499 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.41
LINC00402-201ENST00000419499 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.42
LINC00402-201ENST00000419499 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
LINC00402-201ENST00000419499 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
LINC00402-201ENST00000419499 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
LINC00402-201ENST00000419499 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
LINC00402-201ENST00000419499 PXDNLA1KZ92 1463 aa12.45□□□□□ -0.42
LINC00402-201ENST00000419499 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
LINC00402-201ENST00000419499 PSME1Q06323 249 aa12.44□□□□□ -0.42
LINC00402-201ENST00000419499 GLI3P10071 1580 aa12.44□□□□□ -0.42
LINC00402-201ENST00000419499 TNS3Q68CZ2 1445 aa12.44□□□□□ -0.42
LINC00402-201ENST00000419499 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
LINC00402-201ENST00000419499 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
LINC00402-201ENST00000419499 SHANK3Q9BYB0 1731 aa12.43□□□□□ -0.42
LINC00402-201ENST00000419499 NBPF6Q5VWK0 638 aa12.43□□□□□ -0.42
LINC00402-201ENST00000419499 INTS3Q68E01 1043 aaKnown RBP12.43□□□□□ -0.42
LINC00402-201ENST00000419499 PROSER2Q86WR7 435 aaPredicted RBP12.43□□□□□ -0.42
LINC00402-201ENST00000419499 NBPF4Q96M43 638 aa12.43□□□□□ -0.42
LINC00402-201ENST00000419499 C5P01031 1676 aa12.43□□□□□ -0.42
LINC00402-201ENST00000419499 GCP02774 474 aa12.43□□□□□ -0.42
LINC00402-201ENST00000419499 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
LINC00402-201ENST00000419499 MRC1P22897 1456 aa12.43□□□□□ -0.42
LINC00402-201ENST00000419499 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
LINC00402-201ENST00000419499 RGS3P49796 1198 aa12.42□□□□□ -0.42
LINC00402-201ENST00000419499 IL17REQ8NFR9 667 aa12.42□□□□□ -0.42
LINC00402-201ENST00000419499 PTPRCP08575 1304 aa12.42□□□□□ -0.42
LINC00402-201ENST00000419499 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
LINC00402-201ENST00000419499 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
LINC00402-201ENST00000419499 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
LINC00402-201ENST00000419499 API5Q9BZZ5 524 aaKnown RBP12.41□□□□□ -0.42
LINC00402-201ENST00000419499 HAP1P54257 671 aaPredicted RBP12.41□□□□□ -0.42
LINC00402-201ENST00000419499 NOP58Q9Y2X3 529 aaKnown RBP12.4□□□□□ -0.42
LINC00402-201ENST00000419499 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
LINC00402-201ENST00000419499 NUCB1Q02818 461 aa12.4□□□□□ -0.42
LINC00402-201ENST00000419499 KRT28Q7Z3Y7 464 aa12.4□□□□□ -0.42
LINC00402-201ENST00000419499 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
LINC00402-201ENST00000419499 PAPPAQ13219 1627 aa12.4□□□□□ -0.43
LINC00402-201ENST00000419499 ERBB3P21860 1342 aa12.39□□□□□ -0.43
LINC00402-201ENST00000419499 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
LINC00402-201ENST00000419499 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
LINC00402-201ENST00000419499 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
LINC00402-201ENST00000419499 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
LINC00402-201ENST00000419499 CPDO75976 1380 aa12.38□□□□□ -0.43
LINC00402-201ENST00000419499 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
LINC00402-201ENST00000419499 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
LINC00402-201ENST00000419499 MIS18AQ9NYP9 233 aa12.38□□□□□ -0.43
LINC00402-201ENST00000419499 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
LINC00402-201ENST00000419499 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
LINC00402-201ENST00000419499 MEGF6O75095 1541 aa12.38□□□□□ -0.43
LINC00402-201ENST00000419499 CHMP4BQ9H444 224 aaKnown RBP12.37□□□□□ -0.43
LINC00402-201ENST00000419499 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
LINC00402-201ENST00000419499 SEC24BO95487 1268 aa12.36□□□□□ -0.43
LINC00402-201ENST00000419499 LTV1Q96GA3 475 aaPredicted RBP12.36□□□□□ -0.43
LINC00402-201ENST00000419499 HSPA2P54652 639 aa12.36□□□□□ -0.43
LINC00402-201ENST00000419499 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
LINC00402-201ENST00000419499 KDM6AO15550 1401 aaPredicted RBP12.35□□□□□ -0.43
LINC00402-201ENST00000419499 AKAP4Q5JQC9 854 aa12.35□□□□□ -0.43
LINC00402-201ENST00000419499 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
LINC00402-201ENST00000419499 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
LINC00402-201ENST00000419499 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
LINC00402-201ENST00000419499 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
LINC00402-201ENST00000419499 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
LINC00402-201ENST00000419499 ATF3P18847 181 aa12.34□□□□□ -0.43
LINC00402-201ENST00000419499 G2E3Q7L622 706 aa12.34□□□□□ -0.43
LINC00402-201ENST00000419499 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms