RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RTF1Q92541 710 aaKnown RBP14.71□□□□□ -0.05
LIMK1-202ENST00000418310 FSD2A1L4K1 749 aa14.71□□□□□ -0.06
LIMK1-202ENST00000418310 MCTP1Q6DN14 999 aa14.71□□□□□ -0.06
LIMK1-202ENST00000418310 DCTPP1Q9H773 170 aa14.71□□□□□ -0.06
LIMK1-202ENST00000418310 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
LIMK1-202ENST00000418310 RAB3GAP1Q15042 981 aa14.7□□□□□ -0.06
LIMK1-202ENST00000418310 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIMK1-202ENST00000418310 DDX49Q9Y6V7 483 aaKnown RBP14.7□□□□□ -0.06
LIMK1-202ENST00000418310 BRPF1P55201 1214 aaPredicted RBP14.7□□□□□ -0.06
LIMK1-202ENST00000418310 ROBO2Q9HCK4 1378 aa14.7□□□□□ -0.06
LIMK1-202ENST00000418310 ANKRD26Q9UPS8 1709 aa14.7□□□□□ -0.06
LIMK1-202ENST00000418310 CLTCQ00610 1675 aaKnown RBP14.7□□□□□ -0.06
LIMK1-202ENST00000418310 NGDNQ8NEJ9 315 aaKnown RBP14.7□□□□□ -0.06
LIMK1-202ENST00000418310 AMPHP49418 695 aa14.69□□□□□ -0.06
LIMK1-202ENST00000418310 MTHFSDQ2M296 383 aaKnown RBP14.69□□□□□ -0.06
LIMK1-202ENST00000418310 ZGPATQ8N5A5 531 aaKnown RBP14.69□□□□□ -0.06
LIMK1-202ENST00000418310 ANKRD44Q8N8A2 993 aa14.69□□□□□ -0.06
LIMK1-202ENST00000418310 MRE11P49959 708 aa14.68□□□□□ -0.06
LIMK1-202ENST00000418310 RBM33Q96EV2 1170 aaKnown RBP14.68□□□□□ -0.06
LIMK1-202ENST00000418310 DDIT3P35638 169 aa14.68□□□□□ -0.06
LIMK1-202ENST00000418310 MAP3K19Q56UN5 1328 aa14.68□□□□□ -0.06
LIMK1-202ENST00000418310 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
LIMK1-202ENST00000418310 AK9Q5TCS8 1911 aa14.68□□□□□ -0.06
LIMK1-202ENST00000418310 LTKP29376 864 aa14.67□□□□□ -0.06
LIMK1-202ENST00000418310 FKBP5Q13451 457 aaPredicted RBP14.67□□□□□ -0.06
LIMK1-202ENST00000418310 RILPL2Q969X0 211 aa14.67□□□□□ -0.06
LIMK1-202ENST00000418310 CHL1O00533 1208 aa14.67□□□□□ -0.06
LIMK1-202ENST00000418310 INTS3Q68E01 1043 aaKnown RBP14.67□□□□□ -0.06
LIMK1-202ENST00000418310 USHBP1Q8N6Y0 703 aa14.67□□□□□ -0.06
LIMK1-202ENST00000418310 PIK3R4Q99570 1358 aa14.67□□□□□ -0.06
LIMK1-202ENST00000418310 TRIM44Q96DX7 344 aaPredicted RBP14.67□□□□□ -0.06
LIMK1-202ENST00000418310 TRIM6-TRIM34B2RNG4 842 aa14.66□□□□□ -0.06
LIMK1-202ENST00000418310 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
LIMK1-202ENST00000418310 USP26Q9BXU7 913 aa14.65□□□□□ -0.06
LIMK1-202ENST00000418310 RTL1A6NKG5 1358 aa14.65□□□□□ -0.06
LIMK1-202ENST00000418310 BAG4O95429 457 aaKnown RBP14.65□□□□□ -0.06
LIMK1-202ENST00000418310 MAP4K4O95819 1239 aaPredicted RBP14.65□□□□□ -0.06
LIMK1-202ENST00000418310 CAVIN1Q6NZI2 390 aaKnown RBP14.65□□□□□ -0.06
LIMK1-202ENST00000418310 CASC1Q6TDU7 716 aa14.65□□□□□ -0.06
LIMK1-202ENST00000418310 DTNBO60941 627 aa14.65□□□□□ -0.06
LIMK1-202ENST00000418310 AATKQ6ZMQ8 1374 aa14.65□□□□□ -0.06
LIMK1-202ENST00000418310 NCOA3Q9Y6Q9 1424 aa14.64□□□□□ -0.07
LIMK1-202ENST00000418310 RPAP2Q8IXW5 612 aaPredicted RBP14.64□□□□□ -0.07
LIMK1-202ENST00000418310 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
LIMK1-202ENST00000418310 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
LIMK1-202ENST00000418310 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
LIMK1-202ENST00000418310 HDGFP51858 240 aaKnown RBP14.64□□□□□ -0.07
LIMK1-202ENST00000418310 NLRP6P59044 892 aa14.64□□□□□ -0.07
LIMK1-202ENST00000418310 STK31Q9BXU1 1019 aa14.64□□□□□ -0.07
LIMK1-202ENST00000418310 ATP10DQ9P241 1426 aa14.63□□□□□ -0.07
LIMK1-202ENST00000418310 RABEP1Q15276 862 aa14.63□□□□□ -0.07
LIMK1-202ENST00000418310 ERBB4Q15303 1308 aa14.63□□□□□ -0.07
LIMK1-202ENST00000418310 EYA1Q99502 592 aa14.63□□□□□ -0.07
LIMK1-202ENST00000418310 RBM27Q9P2N5 1060 aaKnown RBP14.63□□□□□ -0.07
LIMK1-202ENST00000418310 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
LIMK1-202ENST00000418310 EIF2S2P20042 333 aaKnown RBP14.62□□□□□ -0.07
LIMK1-202ENST00000418310 NEK4P51957 841 aa14.62□□□□□ -0.07
LIMK1-202ENST00000418310 KNDC1Q76NI1 1749 aa14.62□□□□□ -0.07
LIMK1-202ENST00000418310 PNMA6EA0A0J9YXQ4 647 aa14.62□□□□□ -0.07
LIMK1-202ENST00000418310 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
LIMK1-202ENST00000418310 ANO2Q9NQ90 1003 aa14.62□□□□□ -0.07
LIMK1-202ENST00000418310 AMOTL2Q9Y2J4 779 aa14.61□□□□□ -0.07
LIMK1-202ENST00000418310 RGS12O14924 1447 aa14.61□□□□□ -0.07
LIMK1-202ENST00000418310 HMMRO75330 724 aa14.61□□□□□ -0.07
LIMK1-202ENST00000418310 UPF3BQ9BZI7 483 aaKnown RBP14.61□□□□□ -0.07
LIMK1-202ENST00000418310 ST18O60284 1047 aa14.6□□□□□ -0.07
LIMK1-202ENST00000418310 PDE1AP54750 535 aa14.6□□□□□ -0.07
LIMK1-202ENST00000418310 TNRQ92752 1358 aa14.6□□□□□ -0.07
LIMK1-202ENST00000418310 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
LIMK1-202ENST00000418310 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
LIMK1-202ENST00000418310 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
LIMK1-202ENST00000418310 LARP6Q9BRS8 491 aaKnown RBP14.6□□□□□ -0.07
LIMK1-202ENST00000418310 ANXA1P04083 346 aa14.6□□□□□ -0.07
LIMK1-202ENST00000418310 FLIIQ13045 1269 aa14.59□□□□□ -0.07
LIMK1-202ENST00000418310 LRRFIP2Q9Y608 721 aaKnown RBP14.59□□□□□ -0.07
LIMK1-202ENST00000418310 ERC2O15083 957 aa14.59□□□□□ -0.07
LIMK1-202ENST00000418310 GNAI2P04899 355 aa14.59□□□□□ -0.07
LIMK1-202ENST00000418310 HAP1P54257 671 aaPredicted RBP14.59□□□□□ -0.07
LIMK1-202ENST00000418310 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
LIMK1-202ENST00000418310 DLC1Q96QB1 1528 aa14.59□□□□□ -0.07
LIMK1-202ENST00000418310 ESPNB1AK53 854 aa14.59□□□□□ -0.07
LIMK1-202ENST00000418310 NASPP49321 788 aaPredicted RBP14.59□□□□□ -0.07
LIMK1-202ENST00000418310 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
LIMK1-202ENST00000418310 PTPRCP08575 1304 aa14.58□□□□□ -0.07
LIMK1-202ENST00000418310 REC8O95072 547 aa14.58□□□□□ -0.08
LIMK1-202ENST00000418310 SKOR2Q2VWA4 1001 aaPredicted RBP14.58□□□□□ -0.08
LIMK1-202ENST00000418310 UNC5CLQ8IV45 518 aa14.57□□□□□ -0.08
LIMK1-202ENST00000418310 PHAXQ9H814 394 aaKnown RBP14.57□□□□□ -0.08
LIMK1-202ENST00000418310 TMEM2Q9UHN6 1383 aa14.57□□□□□ -0.08
LIMK1-202ENST00000418310 RIMS1Q86UR5 1692 aaKnown RBP14.57□□□□□ -0.08
LIMK1-202ENST00000418310 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 GDPD2Q9HCC8 539 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 USP6P35125 1406 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 NRXN3Q9Y4C0 1643 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 RNF214Q8ND24 703 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 ABTB2Q8N961 1025 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 EID1Q9Y6B2 187 aa14.56□□□□□ -0.08
LIMK1-202ENST00000418310 SPATA31D1Q6ZQQ2 1576 aa14.55□□□□□ -0.08
LIMK1-202ENST00000418310 MX1P20591 662 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms