RNA–Protein interactions for RNA: ENST00000418185.6

GTF2IRD2B-202, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-202ENST00000418185 IL13P35225 146 aa17.34■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 CLTCL1P53675 1640 aa17.34■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 MPRIPQ6WCQ1 1025 aa17.34■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 PHAXQ9H814 394 aaKnown RBP17.34■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 EID1Q9Y6B2 187 aa17.33■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 ERBB4Q15303 1308 aa17.33■□□□□ 0.37
GTF2IRD2B-202ENST00000418185 PNMA6EA0A0J9YXQ4 647 aa17.33■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 MYL6BP14649 208 aa17.33■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 ABCC11Q96J66 1382 aa17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PPIP5K1Q6PFW1 1433 aa17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 ZSCAN23Q3MJ62 389 aa17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 MX1P20591 662 aa17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 FLIIQ13045 1269 aa17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 C17orf53Q8N3J3 647 aaPredicted RBP17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 TMX3Q96JJ7 454 aa17.32■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PALD1Q9ULE6 856 aa17.31■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 MSH6P52701 1360 aa17.31■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 CAMK4Q16566 473 aa17.31■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PDE1AP54750 535 aa17.31■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 TSC1Q92574 1164 aa17.3■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 USP26Q9BXU7 913 aa17.3■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 RBSNQ9H1K0 784 aa17.3■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PA2G4Q9UQ80 394 aaKnown RBP17.3■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 IFIT2P09913 472 aaKnown RBP17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PSME1Q06323 249 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 CCDC83Q8IWF9 413 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 NECAB1Q8N987 351 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 RBM25P49756 843 aaKnown RBP17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 CCDC8Q9H0W5 538 aaPredicted RBP17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 FAM173BQ6P4H8 233 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 USP25Q9UHP3 1055 aa17.29■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 YTHDC2Q9H6S0 1430 aaKnown RBP17.27■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PPP1R42Q7Z4L9 355 aa17.27■□□□□ 0.36
GTF2IRD2B-202ENST00000418185 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 ZCCHC11Q5TAX3 1644 aaKnown RBP17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 RNF17Q9BXT8 1623 aaKnown RBP17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 CASTP20810 708 aaKnown RBP17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 ZNF592Q92610 1267 aa17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 AMOTL2Q9Y2J4 779 aa17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 ABCC1P33527 1531 aa17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 EYA1Q99502 592 aa17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 KIF2CQ99661 725 aa17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 TFIP11Q9UBB9 837 aaKnown RBP17.26■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 IL16Q14005 1332 aa17.25■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 UHRF1BP1LA0JNW5 1464 aa17.25■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 CIZ1Q9ULV3 898 aaPredicted RBP17.25■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 GADD45BO75293 160 aaPredicted RBP17.25■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 BOLA2Q9H3K6 86 aa17.25■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 DDX11Q96FC9 970 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 TTC21BQ7Z4L5 1316 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 GNAI3P08754 354 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 SRCIN1Q9C0H9 1055 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 TRPM2O94759 1503 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 KCNQ3O43525 872 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 MADDQ8WXG6 1647 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 CLCN1P35523 988 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 SNX21Q969T3 373 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 TTC12Q9H892 705 aaPredicted RBP17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 NPHP1O15259 732 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
GTF2IRD2B-202ENST00000418185 AACSQ86V21 672 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms