RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RGS12O14924 1447 aa17.96■□□□□ 0.47
HDAC9-208ENST00000417496 SSFA2P28290 1259 aa17.96■□□□□ 0.47
HDAC9-208ENST00000417496 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
HDAC9-208ENST00000417496 G2E3Q7L622 706 aa17.96■□□□□ 0.47
HDAC9-208ENST00000417496 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
HDAC9-208ENST00000417496 EIF5BO60841 1220 aaKnown RBP17.96■□□□□ 0.47
HDAC9-208ENST00000417496 LTKP29376 864 aa17.96■□□□□ 0.47
HDAC9-208ENST00000417496 SDSP20132 328 aa17.95■□□□□ 0.46
HDAC9-208ENST00000417496 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
HDAC9-208ENST00000417496 GAS2L3Q86XJ1 694 aa17.95■□□□□ 0.46
HDAC9-208ENST00000417496 ATP10DQ9P241 1426 aa17.95■□□□□ 0.46
HDAC9-208ENST00000417496 MTHFSDQ2M296 383 aaKnown RBP17.94■□□□□ 0.46
HDAC9-208ENST00000417496 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
HDAC9-208ENST00000417496 GBP4Q96PP9 640 aa17.94■□□□□ 0.46
HDAC9-208ENST00000417496 CIZ1Q9ULV3 898 aaPredicted RBP17.94■□□□□ 0.46
HDAC9-208ENST00000417496 RTL1A6NKG5 1358 aa17.93■□□□□ 0.46
HDAC9-208ENST00000417496 GRPEL1Q9HAV7 217 aa17.93■□□□□ 0.46
HDAC9-208ENST00000417496 MAP3K19Q56UN5 1328 aa17.93■□□□□ 0.46
HDAC9-208ENST00000417496 RPAP2Q8IXW5 612 aaPredicted RBP17.93■□□□□ 0.46
HDAC9-208ENST00000417496 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
HDAC9-208ENST00000417496 CEBPAP49715 358 aaPredicted RBP17.92■□□□□ 0.46
HDAC9-208ENST00000417496 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
HDAC9-208ENST00000417496 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
HDAC9-208ENST00000417496 MRE11P49959 708 aa17.92■□□□□ 0.46
HDAC9-208ENST00000417496 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
HDAC9-208ENST00000417496 C3P01024 1663 aa17.92■□□□□ 0.46
HDAC9-208ENST00000417496 TECPR2O15040 1411 aa17.91■□□□□ 0.46
HDAC9-208ENST00000417496 MON2Q7Z3U7 1717 aa17.91■□□□□ 0.46
HDAC9-208ENST00000417496 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
HDAC9-208ENST00000417496 TNRQ92752 1358 aa17.91■□□□□ 0.46
HDAC9-208ENST00000417496 PKP1Q13835 747 aa17.9■□□□□ 0.46
HDAC9-208ENST00000417496 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
HDAC9-208ENST00000417496 REREQ9P2R6 1566 aa17.9■□□□□ 0.46
HDAC9-208ENST00000417496 PLEKHG3A1L390 1219 aa17.9■□□□□ 0.46
HDAC9-208ENST00000417496 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.45
HDAC9-208ENST00000417496 CRB1P82279 1406 aa17.89■□□□□ 0.45
HDAC9-208ENST00000417496 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.45
HDAC9-208ENST00000417496 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
HDAC9-208ENST00000417496 ADAMTS13Q76LX8 1427 aa17.89■□□□□ 0.45
HDAC9-208ENST00000417496 PTPRCP08575 1304 aa17.89■□□□□ 0.45
HDAC9-208ENST00000417496 NUTM2GQ5VZR2 741 aa17.89■□□□□ 0.45
HDAC9-208ENST00000417496 USP6P35125 1406 aa17.88■□□□□ 0.45
HDAC9-208ENST00000417496 KIAA0232Q92628 1395 aa17.88■□□□□ 0.45
HDAC9-208ENST00000417496 EXOC6BQ9Y2D4 811 aa17.88■□□□□ 0.45
HDAC9-208ENST00000417496 HAP1P54257 671 aaPredicted RBP17.88■□□□□ 0.45
HDAC9-208ENST00000417496 RABEP1Q15276 862 aa17.88■□□□□ 0.45
HDAC9-208ENST00000417496 EYA1Q99502 592 aa17.87■□□□□ 0.45
HDAC9-208ENST00000417496 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
HDAC9-208ENST00000417496 AKAP12Q02952 1782 aa17.86■□□□□ 0.45
HDAC9-208ENST00000417496 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
HDAC9-208ENST00000417496 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
HDAC9-208ENST00000417496 BAG4O95429 457 aaKnown RBP17.86■□□□□ 0.45
HDAC9-208ENST00000417496 AMPHP49418 695 aa17.86■□□□□ 0.45
HDAC9-208ENST00000417496 NGDNQ8NEJ9 315 aaKnown RBP17.86■□□□□ 0.45
HDAC9-208ENST00000417496 ITSN1Q15811 1721 aa17.85■□□□□ 0.45
HDAC9-208ENST00000417496 CHAMP1Q96JM3 812 aa17.85■□□□□ 0.45
HDAC9-208ENST00000417496 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
HDAC9-208ENST00000417496 MCTP1Q6DN14 999 aa17.83■□□□□ 0.45
HDAC9-208ENST00000417496 DDX49Q9Y6V7 483 aaKnown RBP17.83■□□□□ 0.45
HDAC9-208ENST00000417496 AK9Q5TCS8 1911 aa17.83■□□□□ 0.45
HDAC9-208ENST00000417496 PTPRUQ92729 1446 aa17.83■□□□□ 0.45
HDAC9-208ENST00000417496 NRKQ7Z2Y5 1582 aa17.83■□□□□ 0.44
HDAC9-208ENST00000417496 PDE1AP54750 535 aa17.83■□□□□ 0.44
HDAC9-208ENST00000417496 SKOR2Q2VWA4 1001 aaPredicted RBP17.83■□□□□ 0.44
HDAC9-208ENST00000417496 USP31Q70CQ4 1352 aa17.83■□□□□ 0.44
HDAC9-208ENST00000417496 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
HDAC9-208ENST00000417496 LTV1Q96GA3 475 aaPredicted RBP17.82■□□□□ 0.44
HDAC9-208ENST00000417496 PNMA6EA0A0J9YXQ4 647 aa17.82■□□□□ 0.44
HDAC9-208ENST00000417496 FKBP5Q13451 457 aaPredicted RBP17.82■□□□□ 0.44
HDAC9-208ENST00000417496 RIMS1Q86UR5 1692 aaKnown RBP17.82■□□□□ 0.44
HDAC9-208ENST00000417496 HMMRO75330 724 aa17.81■□□□□ 0.44
HDAC9-208ENST00000417496 NCLP19338 710 aaKnown RBP17.81■□□□□ 0.44
HDAC9-208ENST00000417496 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
HDAC9-208ENST00000417496 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
HDAC9-208ENST00000417496 NLRP6P59044 892 aa17.8■□□□□ 0.44
HDAC9-208ENST00000417496 FOXD4L5Q5VV16 416 aaPredicted RBP17.8■□□□□ 0.44
HDAC9-208ENST00000417496 FOXD4L4Q8WXT5 416 aaPredicted RBP17.8■□□□□ 0.44
HDAC9-208ENST00000417496 GOLGA6L22H0YM25 854 aa17.8■□□□□ 0.44
HDAC9-208ENST00000417496 GNAI2P04899 355 aa17.8■□□□□ 0.44
HDAC9-208ENST00000417496 FLIIQ13045 1269 aa17.8■□□□□ 0.44
HDAC9-208ENST00000417496 STK31Q9BXU1 1019 aa17.8■□□□□ 0.44
HDAC9-208ENST00000417496 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
HDAC9-208ENST00000417496 ERC2O15083 957 aa17.79■□□□□ 0.44
HDAC9-208ENST00000417496 CEP170BQ9Y4F5 1589 aaPredicted RBP17.79■□□□□ 0.44
HDAC9-208ENST00000417496 REC8O95072 547 aa17.79■□□□□ 0.44
HDAC9-208ENST00000417496 ARHGEF10O15013 1369 aa17.79■□□□□ 0.44
HDAC9-208ENST00000417496 FLT4P35916 1363 aa17.79■□□□□ 0.44
HDAC9-208ENST00000417496 ST18O60284 1047 aa17.78■□□□□ 0.44
HDAC9-208ENST00000417496 CLEC17AQ6ZS10 378 aa17.78■□□□□ 0.44
HDAC9-208ENST00000417496 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
HDAC9-208ENST00000417496 USHBP1Q8N6Y0 703 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 IL17REQ8NFR9 667 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 SBNO1A3KN83 1393 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 NEK4P51957 841 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 KLHL40Q2TBA0 621 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.44
HDAC9-208ENST00000417496 IGSF1Q8N6C5 1336 aa17.77■□□□□ 0.44
HDAC9-208ENST00000417496 ZDHHC9Q9Y397 364 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms