RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 RGPD8O14715 1765 aaPredicted RBP12.48□□□□□ -0.41
LINC00494-201ENST00000416742 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
LINC00494-201ENST00000416742 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
LINC00494-201ENST00000416742 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
LINC00494-201ENST00000416742 VIRMAQ69YN4 1812 aaKnown RBP12.47□□□□□ -0.41
LINC00494-201ENST00000416742 FRAT2O75474 233 aaPredicted RBP12.47□□□□□ -0.41
LINC00494-201ENST00000416742 SLC4A10Q6U841 1118 aa12.47□□□□□ -0.41
LINC00494-201ENST00000416742 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
LINC00494-201ENST00000416742 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
LINC00494-201ENST00000416742 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
LINC00494-201ENST00000416742 APBB1O00213 710 aa12.46□□□□□ -0.41
LINC00494-201ENST00000416742 HOXC9P31274 260 aa12.46□□□□□ -0.41
LINC00494-201ENST00000416742 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
LINC00494-201ENST00000416742 NECTIN2Q92692 538 aa12.46□□□□□ -0.41
LINC00494-201ENST00000416742 TBC1D2Q9BYX2 928 aa12.46□□□□□ -0.41
LINC00494-201ENST00000416742 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.42
LINC00494-201ENST00000416742 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
LINC00494-201ENST00000416742 PSME1Q06323 249 aa12.45□□□□□ -0.42
LINC00494-201ENST00000416742 G2E3Q7L622 706 aa12.45□□□□□ -0.42
LINC00494-201ENST00000416742 F6X3S4 739 aa12.45□□□□□ -0.42
LINC00494-201ENST00000416742 INTS3Q68E01 1043 aaKnown RBP12.45□□□□□ -0.42
LINC00494-201ENST00000416742 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
LINC00494-201ENST00000416742 CRB1P82279 1406 aa12.44□□□□□ -0.42
LINC00494-201ENST00000416742 KIAA0232Q92628 1395 aa12.44□□□□□ -0.42
LINC00494-201ENST00000416742 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
LINC00494-201ENST00000416742 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
LINC00494-201ENST00000416742 MEIS3Q99687 375 aa12.43□□□□□ -0.42
LINC00494-201ENST00000416742 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
LINC00494-201ENST00000416742 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
LINC00494-201ENST00000416742 BMP2KLQ5H9B9 411 aa12.42□□□□□ -0.42
LINC00494-201ENST00000416742 CEP170BQ9Y4F5 1589 aaPredicted RBP12.42□□□□□ -0.42
LINC00494-201ENST00000416742 PTPRCP08575 1304 aa12.42□□□□□ -0.42
LINC00494-201ENST00000416742 ANKARQ7Z5J8 1434 aa12.42□□□□□ -0.42
LINC00494-201ENST00000416742 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
LINC00494-201ENST00000416742 NALCNQ8IZF0 1738 aa12.42□□□□□ -0.42
LINC00494-201ENST00000416742 RIMS1Q86UR5 1692 aaKnown RBP12.41□□□□□ -0.42
LINC00494-201ENST00000416742 KDRP35968 1356 aa12.41□□□□□ -0.42
LINC00494-201ENST00000416742 ANKRD44Q8N8A2 993 aa12.41□□□□□ -0.42
LINC00494-201ENST00000416742 DCTPP1Q9H773 170 aa12.41□□□□□ -0.42
LINC00494-201ENST00000416742 IL17REQ8NFR9 667 aa12.41□□□□□ -0.42
LINC00494-201ENST00000416742 MSH6P52701 1360 aa12.41□□□□□ -0.42
LINC00494-201ENST00000416742 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
LINC00494-201ENST00000416742 SMARCA5O60264 1052 aaPredicted RBP12.4□□□□□ -0.42
LINC00494-201ENST00000416742 RPAP2Q8IXW5 612 aaPredicted RBP12.4□□□□□ -0.42
LINC00494-201ENST00000416742 FKBP5Q13451 457 aaPredicted RBP12.4□□□□□ -0.42
LINC00494-201ENST00000416742 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
LINC00494-201ENST00000416742 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
LINC00494-201ENST00000416742 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
LINC00494-201ENST00000416742 GSE1Q14687 1217 aa12.39□□□□□ -0.43
LINC00494-201ENST00000416742 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
LINC00494-201ENST00000416742 HSCBQ8IWL3 235 aa12.39□□□□□ -0.43
LINC00494-201ENST00000416742 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
LINC00494-201ENST00000416742 RGPD1P0DJD0 1748 aa12.39□□□□□ -0.43
LINC00494-201ENST00000416742 HTATSF1O43719 755 aaKnown RBP12.38□□□□□ -0.43
LINC00494-201ENST00000416742 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
LINC00494-201ENST00000416742 CCDC30Q5VVM6 783 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 RGS12O14924 1447 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 OTUD7AQ8TE49 926 aaPredicted RBP12.38□□□□□ -0.43
LINC00494-201ENST00000416742 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 IP6K1Q92551 441 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
LINC00494-201ENST00000416742 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
LINC00494-201ENST00000416742 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
LINC00494-201ENST00000416742 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
LINC00494-201ENST00000416742 FLIIQ13045 1269 aa12.37□□□□□ -0.43
LINC00494-201ENST00000416742 MAP3K5Q99683 1374 aa12.37□□□□□ -0.43
LINC00494-201ENST00000416742 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
LINC00494-201ENST00000416742 CDC45O75419 566 aa12.37□□□□□ -0.43
LINC00494-201ENST00000416742 ANTXR1Q9H6X2 564 aa12.37□□□□□ -0.43
LINC00494-201ENST00000416742 HMMRO75330 724 aa12.36□□□□□ -0.43
LINC00494-201ENST00000416742 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
LINC00494-201ENST00000416742 LGR6Q9HBX8 967 aa12.36□□□□□ -0.43
LINC00494-201ENST00000416742 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
LINC00494-201ENST00000416742 GNAI2P04899 355 aa12.35□□□□□ -0.43
LINC00494-201ENST00000416742 HDGFL1Q5TGJ6 251 aa12.35□□□□□ -0.43
LINC00494-201ENST00000416742 PROSER2Q86WR7 435 aaPredicted RBP12.35□□□□□ -0.43
LINC00494-201ENST00000416742 KCNH5Q8NCM2 988 aa12.35□□□□□ -0.43
LINC00494-201ENST00000416742 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
LINC00494-201ENST00000416742 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
LINC00494-201ENST00000416742 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
LINC00494-201ENST00000416742 EXOC6BQ9Y2D4 811 aa12.34□□□□□ -0.43
LINC00494-201ENST00000416742 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.43
LINC00494-201ENST00000416742 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.43
LINC00494-201ENST00000416742 GCP02774 474 aa12.33□□□□□ -0.44
LINC00494-201ENST00000416742 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
LINC00494-201ENST00000416742 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
LINC00494-201ENST00000416742 HSP90AA1P07900 732 aaKnown RBP12.33□□□□□ -0.44
LINC00494-201ENST00000416742 TEFQ10587 303 aa12.33□□□□□ -0.44
LINC00494-201ENST00000416742 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
LINC00494-201ENST00000416742 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
LINC00494-201ENST00000416742 ADGRL3Q9HAR2 1447 aa12.32□□□□□ -0.44
LINC00494-201ENST00000416742 KCNQ3O43525 872 aa12.32□□□□□ -0.44
LINC00494-201ENST00000416742 GNAI3P08754 354 aa12.32□□□□□ -0.44
LINC00494-201ENST00000416742 SDSP20132 328 aa12.31□□□□□ -0.44
LINC00494-201ENST00000416742 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
LINC00494-201ENST00000416742 NPHP4O75161 1426 aaPredicted RBP12.31□□□□□ -0.44
LINC00494-201ENST00000416742 CHD2O14647 1828 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms