RNA–Protein interactions for RNA: ENST00000416277.5

VWA3B-202, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,827 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-202ENST00000416277 CDC45O75419 566 aa17.01■□□□□ 0.31
VWA3B-202ENST00000416277 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
VWA3B-202ENST00000416277 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
VWA3B-202ENST00000416277 ATP10DQ9P241 1426 aa17.01■□□□□ 0.31
VWA3B-202ENST00000416277 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
VWA3B-202ENST00000416277 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
VWA3B-202ENST00000416277 KIAA0232Q92628 1395 aa17■□□□□ 0.31
VWA3B-202ENST00000416277 DCTPP1Q9H773 170 aa17■□□□□ 0.31
VWA3B-202ENST00000416277 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
VWA3B-202ENST00000416277 TNRQ92752 1358 aa17■□□□□ 0.31
VWA3B-202ENST00000416277 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
VWA3B-202ENST00000416277 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
VWA3B-202ENST00000416277 CLCN1P35523 988 aa16.99■□□□□ 0.31
VWA3B-202ENST00000416277 AEBP1Q8IUX7 1158 aa16.99■□□□□ 0.31
VWA3B-202ENST00000416277 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
VWA3B-202ENST00000416277 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
VWA3B-202ENST00000416277 BBXQ8WY36 941 aaPredicted RBP16.99■□□□□ 0.31
VWA3B-202ENST00000416277 CHL1O00533 1208 aa16.98■□□□□ 0.31
VWA3B-202ENST00000416277 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
VWA3B-202ENST00000416277 GSPT1P15170 499 aaKnown RBP16.98■□□□□ 0.31
VWA3B-202ENST00000416277 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
VWA3B-202ENST00000416277 XRCC6P12956 609 aaKnown RBP eCLIP16.97■□□□□ 0.31
VWA3B-202ENST00000416277 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
VWA3B-202ENST00000416277 ANKRD44Q8N8A2 993 aa16.97■□□□□ 0.31
VWA3B-202ENST00000416277 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
VWA3B-202ENST00000416277 USP6P35125 1406 aa16.97■□□□□ 0.31
VWA3B-202ENST00000416277 K7ELQ4 463 aaPredicted RBP16.97■□□□□ 0.31
VWA3B-202ENST00000416277 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
VWA3B-202ENST00000416277 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
VWA3B-202ENST00000416277 GZF1Q9H116 711 aaPredicted RBP16.97■□□□□ 0.31
VWA3B-202ENST00000416277 PTPRCP08575 1304 aa16.96■□□□□ 0.31
VWA3B-202ENST00000416277 GBP4Q96PP9 640 aa16.96■□□□□ 0.31
VWA3B-202ENST00000416277 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.3
VWA3B-202ENST00000416277 CD2BP2O95400 341 aaKnown RBP16.96■□□□□ 0.3
VWA3B-202ENST00000416277 TTC22Q5TAA0 569 aa16.96■□□□□ 0.3
VWA3B-202ENST00000416277 RPAP2Q8IXW5 612 aaPredicted RBP16.96■□□□□ 0.3
VWA3B-202ENST00000416277 ISY1Q9ULR0 285 aaKnown RBP16.96■□□□□ 0.3
VWA3B-202ENST00000416277 ACEP12821 1306 aa16.95■□□□□ 0.3
VWA3B-202ENST00000416277 MSH6P52701 1360 aa16.95■□□□□ 0.3
VWA3B-202ENST00000416277 KIF13AQ9H1H9 1805 aa16.94■□□□□ 0.3
VWA3B-202ENST00000416277 CRB1P82279 1406 aa16.94■□□□□ 0.3
VWA3B-202ENST00000416277 GTF2E1P29083 439 aaPredicted RBP16.94■□□□□ 0.3
VWA3B-202ENST00000416277 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
VWA3B-202ENST00000416277 PTMSP20962 102 aa16.94■□□□□ 0.3
VWA3B-202ENST00000416277 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
VWA3B-202ENST00000416277 MRE11P49959 708 aa16.93■□□□□ 0.3
VWA3B-202ENST00000416277 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
VWA3B-202ENST00000416277 CEP85Q6P2H3 762 aa16.93■□□□□ 0.3
VWA3B-202ENST00000416277 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
VWA3B-202ENST00000416277 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
VWA3B-202ENST00000416277 MCM10Q7L590 875 aa16.92■□□□□ 0.3
VWA3B-202ENST00000416277 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
VWA3B-202ENST00000416277 RABEP1Q15276 862 aa16.91■□□□□ 0.3
VWA3B-202ENST00000416277 SKOR2Q2VWA4 1001 aaPredicted RBP16.91■□□□□ 0.3
VWA3B-202ENST00000416277 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
VWA3B-202ENST00000416277 RIMS1Q86UR5 1692 aaKnown RBP16.91■□□□□ 0.3
VWA3B-202ENST00000416277 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
VWA3B-202ENST00000416277 ARXQ96QS3 562 aa16.9■□□□□ 0.3
VWA3B-202ENST00000416277 PANK2Q9BZ23 570 aa16.9■□□□□ 0.3
VWA3B-202ENST00000416277 CLEC17AQ6ZS10 378 aa16.89■□□□□ 0.29
VWA3B-202ENST00000416277 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.29
VWA3B-202ENST00000416277 C16orf71Q8IYS4 520 aaPredicted RBP16.89■□□□□ 0.29
VWA3B-202ENST00000416277 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
VWA3B-202ENST00000416277 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
VWA3B-202ENST00000416277 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
VWA3B-202ENST00000416277 MEIS3Q99687 375 aa16.88■□□□□ 0.29
VWA3B-202ENST00000416277 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
VWA3B-202ENST00000416277 KDRP35968 1356 aa16.88■□□□□ 0.29
VWA3B-202ENST00000416277 USP26Q9BXU7 913 aa16.88■□□□□ 0.29
VWA3B-202ENST00000416277 MAP3K19Q56UN5 1328 aa16.87■□□□□ 0.29
VWA3B-202ENST00000416277 PTPRUQ92729 1446 aa16.87■□□□□ 0.29
VWA3B-202ENST00000416277 OTUD7AQ8TE49 926 aaPredicted RBP16.87■□□□□ 0.29
VWA3B-202ENST00000416277 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
VWA3B-202ENST00000416277 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
VWA3B-202ENST00000416277 FLT4P35916 1363 aa16.87■□□□□ 0.29
VWA3B-202ENST00000416277 FAM208AQ9UK61 1670 aaKnown RBP16.87■□□□□ 0.29
VWA3B-202ENST00000416277 TPM2P07951 284 aa16.87■□□□□ 0.29
VWA3B-202ENST00000416277 SDSP20132 328 aa16.86■□□□□ 0.29
VWA3B-202ENST00000416277 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
VWA3B-202ENST00000416277 HMMRO75330 724 aa16.86■□□□□ 0.29
VWA3B-202ENST00000416277 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
VWA3B-202ENST00000416277 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
VWA3B-202ENST00000416277 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
VWA3B-202ENST00000416277 SSFA2P28290 1259 aa16.85■□□□□ 0.29
VWA3B-202ENST00000416277 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
VWA3B-202ENST00000416277 LTKP29376 864 aa16.85■□□□□ 0.29
VWA3B-202ENST00000416277 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
VWA3B-202ENST00000416277 DIP2AQ14689 1571 aa16.84■□□□□ 0.29
VWA3B-202ENST00000416277 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
VWA3B-202ENST00000416277 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
VWA3B-202ENST00000416277 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
VWA3B-202ENST00000416277 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
VWA3B-202ENST00000416277 TSPYL4Q9UJ04 414 aa16.84■□□□□ 0.29
VWA3B-202ENST00000416277 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
VWA3B-202ENST00000416277 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.29
VWA3B-202ENST00000416277 RTF1Q92541 710 aaKnown RBP16.83■□□□□ 0.29
VWA3B-202ENST00000416277 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.29
VWA3B-202ENST00000416277 OSBPL3Q9H4L5 887 aa16.83■□□□□ 0.28
VWA3B-202ENST00000416277 IGSF1Q8N6C5 1336 aa16.83■□□□□ 0.28
VWA3B-202ENST00000416277 AK9Q5TCS8 1911 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms