RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
MECP2-204ENST00000415944 EMILIN1Q9Y6C2 1016 aa11.1□□□□□ -0.63
MECP2-204ENST00000415944 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 TMPOP42166 694 aaKnown RBP11.09□□□□□ -0.63
MECP2-204ENST00000415944 TNNT2P45379 298 aaPredicted RBP11.09□□□□□ -0.63
MECP2-204ENST00000415944 UNC5CLQ8IV45 518 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 DDRGK1Q96HY6 314 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 ANP32EQ9BTT0 268 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 BTG4Q9NY30 223 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 ERBB3P21860 1342 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
MECP2-204ENST00000415944 GLI3P10071 1580 aa11.08□□□□□ -0.64
MECP2-204ENST00000415944 ZBTB7CA1YPR0 619 aa11.08□□□□□ -0.64
MECP2-204ENST00000415944 AMPHP49418 695 aa11.08□□□□□ -0.64
MECP2-204ENST00000415944 RARSP54136 660 aaKnown RBP11.08□□□□□ -0.64
MECP2-204ENST00000415944 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
MECP2-204ENST00000415944 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
MECP2-204ENST00000415944 USP21Q9UK80 565 aa11.08□□□□□ -0.64
MECP2-204ENST00000415944 RGPD1P0DJD0 1748 aa11.07□□□□□ -0.64
MECP2-204ENST00000415944 VPS72Q15906 364 aa11.07□□□□□ -0.64
MECP2-204ENST00000415944 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
MECP2-204ENST00000415944 WDR17Q8IZU2 1322 aa11.07□□□□□ -0.64
MECP2-204ENST00000415944 U2SURPO15042 1029 aaKnown RBP11.06□□□□□ -0.64
MECP2-204ENST00000415944 GNAI1P63096 354 aa11.06□□□□□ -0.64
MECP2-204ENST00000415944 HSP90AB2PQ58FF8 381 aa11.06□□□□□ -0.64
MECP2-204ENST00000415944 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
MECP2-204ENST00000415944 CLUAP1Q96AJ1 413 aa11.06□□□□□ -0.64
MECP2-204ENST00000415944 CHMP4AQ9BY43 222 aa11.06□□□□□ -0.64
MECP2-204ENST00000415944 TRPC5Q9UL62 973 aaPredicted RBP11.06□□□□□ -0.64
MECP2-204ENST00000415944 CRB1P82279 1406 aa11.06□□□□□ -0.64
MECP2-204ENST00000415944 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
MECP2-204ENST00000415944 ANKRD24Q8TF21 1146 aa11.05□□□□□ -0.64
MECP2-204ENST00000415944 ARHGAP45Q92619 1136 aa11.05□□□□□ -0.64
MECP2-204ENST00000415944 IPO9Q96P70 1041 aaKnown RBP11.05□□□□□ -0.64
MECP2-204ENST00000415944 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
MECP2-204ENST00000415944 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
MECP2-204ENST00000415944 DDX19BQ9UMR2 479 aa11.05□□□□□ -0.64
MECP2-204ENST00000415944 SPATA31A5Q5VU36 1347 aa11.05□□□□□ -0.64
MECP2-204ENST00000415944 SPATA31A7Q8IWB4 1347 aa11.05□□□□□ -0.64
MECP2-204ENST00000415944 NFE2L2Q16236 605 aa11.04□□□□□ -0.64
MECP2-204ENST00000415944 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
MECP2-204ENST00000415944 STRN4Q9NRL3 753 aa11.04□□□□□ -0.64
MECP2-204ENST00000415944 IFT57Q9NWB7 429 aa11.04□□□□□ -0.64
MECP2-204ENST00000415944 SPATA31A1Q5TZJ5 1347 aa11.04□□□□□ -0.64
MECP2-204ENST00000415944 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
MECP2-204ENST00000415944 PPM1GO15355 546 aaPredicted RBP11.03□□□□□ -0.64
MECP2-204ENST00000415944 PDE4AP27815 886 aa11.03□□□□□ -0.64
MECP2-204ENST00000415944 RIPK4P57078 832 aa11.03□□□□□ -0.64
MECP2-204ENST00000415944 EVA1CP58658 441 aa11.03□□□□□ -0.64
MECP2-204ENST00000415944 POTEAQ6S8J7 498 aa11.03□□□□□ -0.64
MECP2-204ENST00000415944 CFAP44Q96MT7 982 aa11.03□□□□□ -0.64
MECP2-204ENST00000415944 CARD10Q9BWT7 1032 aa11.03□□□□□ -0.64
MECP2-204ENST00000415944 QTRT2Q9H974 415 aaKnown RBP11.03□□□□□ -0.64
MECP2-204ENST00000415944 SOS1Q07889 1333 aaPredicted RBP11.03□□□□□ -0.64
MECP2-204ENST00000415944 DISP2A7MBM2 1401 aa11.02□□□□□ -0.64
MECP2-204ENST00000415944 PLIN1O60240 522 aa11.02□□□□□ -0.65
MECP2-204ENST00000415944 EIF4A2Q14240 407 aaKnown RBP11.02□□□□□ -0.65
MECP2-204ENST00000415944 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
MECP2-204ENST00000415944 FTSJ3Q8IY81 847 aaKnown RBP11.02□□□□□ -0.65
MECP2-204ENST00000415944 GJD4Q96KN9 370 aaPredicted RBP11.02□□□□□ -0.65
MECP2-204ENST00000415944 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.65
MECP2-204ENST00000415944 THRAP3Q9Y2W1 955 aaKnown RBP11.02□□□□□ -0.65
MECP2-204ENST00000415944 BRWD3Q6RI45 1802 aa11.01□□□□□ -0.65
MECP2-204ENST00000415944 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
MECP2-204ENST00000415944 IL13P35225 146 aa11.01□□□□□ -0.65
MECP2-204ENST00000415944 RBM6P78332 1123 aaKnown RBP11.01□□□□□ -0.65
MECP2-204ENST00000415944 TOM1L2Q6ZVM7 507 aa11.01□□□□□ -0.65
MECP2-204ENST00000415944 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
MECP2-204ENST00000415944 LTV1Q96GA3 475 aaPredicted RBP11.01□□□□□ -0.65
MECP2-204ENST00000415944 SPINK5Q9NQ38 1064 aaPredicted RBP11.01□□□□□ -0.65
MECP2-204ENST00000415944 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
MECP2-204ENST00000415944 LRRC37A3O60309 1634 aa11.01□□□□□ -0.65
MECP2-204ENST00000415944 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
MECP2-204ENST00000415944 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
MECP2-204ENST00000415944 NEUROD2Q15784 382 aa11□□□□□ -0.65
MECP2-204ENST00000415944 BARGINQ6ZT62 677 aa11□□□□□ -0.65
MECP2-204ENST00000415944 EYA1Q99502 592 aa11□□□□□ -0.65
MECP2-204ENST00000415944 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
MECP2-204ENST00000415944 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
MECP2-204ENST00000415944 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
MECP2-204ENST00000415944 PKD1L3Q7Z443 1732 aa11□□□□□ -0.65
MECP2-204ENST00000415944 SHANK3Q9BYB0 1731 aa11□□□□□ -0.65
MECP2-204ENST00000415944 PLEKHG2Q9H7P9 1386 aa11□□□□□ -0.65
MECP2-204ENST00000415944 RGS12O14924 1447 aa11□□□□□ -0.65
MECP2-204ENST00000415944 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
MECP2-204ENST00000415944 BCAR3O75815 825 aa10.99□□□□□ -0.65
MECP2-204ENST00000415944 RXRBP28702 533 aa10.99□□□□□ -0.65
MECP2-204ENST00000415944 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
MECP2-204ENST00000415944 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
MECP2-204ENST00000415944 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
MECP2-204ENST00000415944 BABAM1Q9NWV8 329 aa10.99□□□□□ -0.65
MECP2-204ENST00000415944 NOP58Q9Y2X3 529 aaKnown RBP10.99□□□□□ -0.65
MECP2-204ENST00000415944 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
MECP2-204ENST00000415944 KDRP35968 1356 aa10.99□□□□□ -0.65
MECP2-204ENST00000415944 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
MECP2-204ENST00000415944 HDAC1Q13547 482 aaPredicted RBP10.98□□□□□ -0.65
MECP2-204ENST00000415944 SMC4Q9NTJ3 1288 aa10.98□□□□□ -0.65
MECP2-204ENST00000415944 OVOS2A0A0G2JMS6 1433 aa10.98□□□□□ -0.65
MECP2-204ENST00000415944 MEGF6O75095 1541 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms