RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
TTC39A-208ENST00000413473 OTUD7AQ8TE49 926 aaPredicted RBP18.57■□□□□ 0.56
TTC39A-208ENST00000413473 GBP4Q96PP9 640 aa18.57■□□□□ 0.56
TTC39A-208ENST00000413473 TMEM2Q9UHN6 1383 aa18.57■□□□□ 0.56
TTC39A-208ENST00000413473 PLEKHG3A1L390 1219 aa18.57■□□□□ 0.56
TTC39A-208ENST00000413473 TNRQ92752 1358 aa18.56■□□□□ 0.56
TTC39A-208ENST00000413473 MIS18AQ9NYP9 233 aa18.56■□□□□ 0.56
TTC39A-208ENST00000413473 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
TTC39A-208ENST00000413473 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
TTC39A-208ENST00000413473 APBB1O00213 710 aa18.56■□□□□ 0.56
TTC39A-208ENST00000413473 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
TTC39A-208ENST00000413473 MEIS3Q99687 375 aa18.56■□□□□ 0.56
TTC39A-208ENST00000413473 NRKQ7Z2Y5 1582 aa18.55■□□□□ 0.56
TTC39A-208ENST00000413473 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
TTC39A-208ENST00000413473 SMARCA5O60264 1052 aaPredicted RBP18.55■□□□□ 0.56
TTC39A-208ENST00000413473 RRAGDQ9NQL2 400 aaPredicted RBP18.55■□□□□ 0.56
TTC39A-208ENST00000413473 OVOS2A0A0J9YW53 1432 aa18.55■□□□□ 0.56
TTC39A-208ENST00000413473 OVOS2Q6IE36 1432 aa18.55■□□□□ 0.56
TTC39A-208ENST00000413473 PTPRCP08575 1304 aa18.55■□□□□ 0.56
TTC39A-208ENST00000413473 RTL1A6NKG5 1358 aa18.54■□□□□ 0.56
TTC39A-208ENST00000413473 MRE11P49959 708 aa18.54■□□□□ 0.56
TTC39A-208ENST00000413473 MSH6P52701 1360 aa18.54■□□□□ 0.56
TTC39A-208ENST00000413473 ADAMTS13Q76LX8 1427 aa18.54■□□□□ 0.56
TTC39A-208ENST00000413473 FOXO3O43524 673 aa18.53■□□□□ 0.56
TTC39A-208ENST00000413473 LTKP29376 864 aa18.53■□□□□ 0.56
TTC39A-208ENST00000413473 USP6P35125 1406 aa18.52■□□□□ 0.56
TTC39A-208ENST00000413473 EIF5BO60841 1220 aaKnown RBP18.52■□□□□ 0.56
TTC39A-208ENST00000413473 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
TTC39A-208ENST00000413473 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.56
TTC39A-208ENST00000413473 CRB1P82279 1406 aa18.52■□□□□ 0.55
TTC39A-208ENST00000413473 SDSP20132 328 aa18.51■□□□□ 0.55
TTC39A-208ENST00000413473 RABEP1Q15276 862 aa18.51■□□□□ 0.55
TTC39A-208ENST00000413473 SSFA2P28290 1259 aa18.51■□□□□ 0.55
TTC39A-208ENST00000413473 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
TTC39A-208ENST00000413473 GRPEL1Q9HAV7 217 aa18.51■□□□□ 0.55
TTC39A-208ENST00000413473 MAP3K19Q56UN5 1328 aa18.51■□□□□ 0.55
TTC39A-208ENST00000413473 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
TTC39A-208ENST00000413473 PEAK1Q9H792 1746 aa18.5■□□□□ 0.55
TTC39A-208ENST00000413473 SLC4A10Q6U841 1118 aa18.5■□□□□ 0.55
TTC39A-208ENST00000413473 G2E3Q7L622 706 aa18.5■□□□□ 0.55
TTC39A-208ENST00000413473 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
TTC39A-208ENST00000413473 USP31Q70CQ4 1352 aa18.5■□□□□ 0.55
TTC39A-208ENST00000413473 SKOR2Q2VWA4 1001 aaPredicted RBP18.5■□□□□ 0.55
TTC39A-208ENST00000413473 TSPYL4Q9UJ04 414 aa18.5■□□□□ 0.55
TTC39A-208ENST00000413473 F6X3S4 739 aa18.49■□□□□ 0.55
TTC39A-208ENST00000413473 ISY1Q9ULR0 285 aaKnown RBP18.48■□□□□ 0.55
TTC39A-208ENST00000413473 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
TTC39A-208ENST00000413473 PTMSP20962 102 aa18.47■□□□□ 0.55
TTC39A-208ENST00000413473 GAS2L3Q86XJ1 694 aa18.47■□□□□ 0.55
TTC39A-208ENST00000413473 CASC1Q6TDU7 716 aa18.47■□□□□ 0.55
TTC39A-208ENST00000413473 RGPD1P0DJD0 1748 aa18.46■□□□□ 0.55
TTC39A-208ENST00000413473 HMMRO75330 724 aa18.46■□□□□ 0.55
TTC39A-208ENST00000413473 ARHGEF10O15013 1369 aa18.46■□□□□ 0.55
TTC39A-208ENST00000413473 SSH2Q76I76 1423 aa18.46■□□□□ 0.55
TTC39A-208ENST00000413473 PLEKHG1Q9ULL1 1385 aa18.46■□□□□ 0.55
TTC39A-208ENST00000413473 AK9Q5TCS8 1911 aa18.45■□□□□ 0.54
TTC39A-208ENST00000413473 TOPAZ1Q8N9V7 1692 aa18.45■□□□□ 0.54
TTC39A-208ENST00000413473 EYA1Q99502 592 aa18.45■□□□□ 0.54
TTC39A-208ENST00000413473 PTPRUQ92729 1446 aa18.45■□□□□ 0.54
TTC39A-208ENST00000413473 AMPHP49418 695 aa18.44■□□□□ 0.54
TTC39A-208ENST00000413473 CCT4P50991 539 aaKnown RBP18.44■□□□□ 0.54
TTC39A-208ENST00000413473 CLEC17AQ6ZS10 378 aa18.44■□□□□ 0.54
TTC39A-208ENST00000413473 AMOTL2Q9Y2J4 779 aa18.44■□□□□ 0.54
TTC39A-208ENST00000413473 NALCNQ8IZF0 1738 aa18.44■□□□□ 0.54
TTC39A-208ENST00000413473 GOLGA6L22H0YM25 854 aa18.44■□□□□ 0.54
TTC39A-208ENST00000413473 BAG4O95429 457 aaKnown RBP18.44■□□□□ 0.54
TTC39A-208ENST00000413473 NGDNQ8NEJ9 315 aaKnown RBP18.44■□□□□ 0.54
TTC39A-208ENST00000413473 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
TTC39A-208ENST00000413473 FLT4P35916 1363 aa18.43■□□□□ 0.54
TTC39A-208ENST00000413473 SBNO1A3KN83 1393 aa18.43■□□□□ 0.54
TTC39A-208ENST00000413473 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
TTC39A-208ENST00000413473 REC8O95072 547 aa18.42■□□□□ 0.54
TTC39A-208ENST00000413473 PDE1AP54750 535 aa18.42■□□□□ 0.54
TTC39A-208ENST00000413473 GNAI2P04899 355 aa18.42■□□□□ 0.54
TTC39A-208ENST00000413473 STK31Q9BXU1 1019 aa18.42■□□□□ 0.54
TTC39A-208ENST00000413473 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
TTC39A-208ENST00000413473 KDRP35968 1356 aa18.41■□□□□ 0.54
TTC39A-208ENST00000413473 OSBPL3Q9H4L5 887 aa18.41■□□□□ 0.54
TTC39A-208ENST00000413473 EID1Q9Y6B2 187 aa18.41■□□□□ 0.54
TTC39A-208ENST00000413473 ERC2O15083 957 aa18.41■□□□□ 0.54
TTC39A-208ENST00000413473 ST18O60284 1047 aa18.41■□□□□ 0.54
TTC39A-208ENST00000413473 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
TTC39A-208ENST00000413473 NUCB2P80303 420 aa18.4■□□□□ 0.54
TTC39A-208ENST00000413473 DDX49Q9Y6V7 483 aaKnown RBP18.4■□□□□ 0.54
TTC39A-208ENST00000413473 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
TTC39A-208ENST00000413473 PKP1Q13835 747 aa18.39■□□□□ 0.53
TTC39A-208ENST00000413473 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
TTC39A-208ENST00000413473 FKBP5Q13451 457 aaPredicted RBP18.39■□□□□ 0.53
TTC39A-208ENST00000413473 KLHL40Q2TBA0 621 aa18.39■□□□□ 0.53
TTC39A-208ENST00000413473 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
TTC39A-208ENST00000413473 FLIIQ13045 1269 aa18.38■□□□□ 0.53
TTC39A-208ENST00000413473 CEP170BQ9Y4F5 1589 aaPredicted RBP18.38■□□□□ 0.53
TTC39A-208ENST00000413473 CYP2E1P05181 493 aaPredicted RBP18.38■□□□□ 0.53
TTC39A-208ENST00000413473 NLRP6P59044 892 aa18.38■□□□□ 0.53
TTC39A-208ENST00000413473 MCTP1Q6DN14 999 aa18.38■□□□□ 0.53
TTC39A-208ENST00000413473 ZGPATQ8N5A5 531 aaKnown RBP18.38■□□□□ 0.53
TTC39A-208ENST00000413473 CLCN1P35523 988 aa18.37■□□□□ 0.53
TTC39A-208ENST00000413473 CCDC30Q5VVM6 783 aa18.37■□□□□ 0.53
TTC39A-208ENST00000413473 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
TTC39A-208ENST00000413473 CWC22Q9HCG8 908 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms