RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
HDAC8-210ENST00000412342 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
HDAC8-210ENST00000412342 RAPGEF4Q8WZA2 1011 aa17.83■□□□□ 0.44
HDAC8-210ENST00000412342 DOT1LQ8TEK3 1739 aa17.83■□□□□ 0.44
HDAC8-210ENST00000412342 TATP17735 454 aaPredicted RBP17.82■□□□□ 0.44
HDAC8-210ENST00000412342 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
HDAC8-210ENST00000412342 TRIM37O94972 964 aa17.81■□□□□ 0.44
HDAC8-210ENST00000412342 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
HDAC8-210ENST00000412342 RGPD3A6NKT7 1758 aaPredicted RBP17.81■□□□□ 0.44
HDAC8-210ENST00000412342 RGPD4Q7Z3J3 1758 aa17.81■□□□□ 0.44
HDAC8-210ENST00000412342 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
HDAC8-210ENST00000412342 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
HDAC8-210ENST00000412342 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
HDAC8-210ENST00000412342 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
HDAC8-210ENST00000412342 RREB1Q92766 1687 aa17.79■□□□□ 0.44
HDAC8-210ENST00000412342 BTAF1O14981 1849 aa17.78■□□□□ 0.44
HDAC8-210ENST00000412342 DDX54Q8TDD1 881 aaKnown RBP17.78■□□□□ 0.44
HDAC8-210ENST00000412342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.78■□□□□ 0.445e-6■■□□□ 11.8
HDAC8-210ENST00000412342 CYP27B1O15528 508 aa17.77■□□□□ 0.44
HDAC8-210ENST00000412342 PCDH11XQ9BZA7 1347 aa17.76■□□□□ 0.43
HDAC8-210ENST00000412342 PCDH11YQ9BZA8 1340 aa17.76■□□□□ 0.43
HDAC8-210ENST00000412342 RALBP1Q15311 655 aa17.76■□□□□ 0.43
HDAC8-210ENST00000412342 SULT6B1Q6IMI4 303 aa17.76■□□□□ 0.43
HDAC8-210ENST00000412342 BCL11BQ9C0K0 894 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-210ENST00000412342 KCNQ2O43526 872 aa17.75■□□□□ 0.43
HDAC8-210ENST00000412342 SF3B2Q13435 895 aaKnown RBP17.75■□□□□ 0.43
HDAC8-210ENST00000412342 ITGB4P16144 1822 aa17.75■□□□□ 0.43
HDAC8-210ENST00000412342 BAG6P46379 1132 aa17.74■□□□□ 0.43
HDAC8-210ENST00000412342 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
HDAC8-210ENST00000412342 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
HDAC8-210ENST00000412342 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
HDAC8-210ENST00000412342 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
HDAC8-210ENST00000412342 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
HDAC8-210ENST00000412342 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
HDAC8-210ENST00000412342 SPG7Q9UQ90 795 aa17.73■□□□□ 0.43
HDAC8-210ENST00000412342 APBA3O96018 575 aa17.72■□□□□ 0.43
HDAC8-210ENST00000412342 HMOX1P09601 288 aa17.72■□□□□ 0.43
HDAC8-210ENST00000412342 PRKRIP1Q9H875 184 aaPredicted RBP17.72■□□□□ 0.43
HDAC8-210ENST00000412342 PHKG2P15735 406 aa17.71■□□□□ 0.43
HDAC8-210ENST00000412342 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
HDAC8-210ENST00000412342 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.42
HDAC8-210ENST00000412342 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
HDAC8-210ENST00000412342 LY75O60449 1722 aa17.7■□□□□ 0.42
HDAC8-210ENST00000412342 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
HDAC8-210ENST00000412342 ADAMTS7Q9UKP4 1686 aa17.7■□□□□ 0.42
HDAC8-210ENST00000412342 U2SURPO15042 1029 aaKnown RBP17.69■□□□□ 0.42
HDAC8-210ENST00000412342 PLSCR1O15162 318 aa17.69■□□□□ 0.42
HDAC8-210ENST00000412342 AMOTQ4VCS5 1084 aa17.69■□□□□ 0.42
HDAC8-210ENST00000412342 PLEKHO1Q53GL0 409 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-210ENST00000412342 IFNL2Q8IZJ0 200 aa17.69■□□□□ 0.42
HDAC8-210ENST00000412342 KDM6AO15550 1401 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-210ENST00000412342 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
HDAC8-210ENST00000412342 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
HDAC8-210ENST00000412342 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
HDAC8-210ENST00000412342 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
HDAC8-210ENST00000412342 PROM2Q8N271 834 aa17.66■□□□□ 0.42
HDAC8-210ENST00000412342 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
HDAC8-210ENST00000412342 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
HDAC8-210ENST00000412342 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
HDAC8-210ENST00000412342 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
HDAC8-210ENST00000412342 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
HDAC8-210ENST00000412342 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
HDAC8-210ENST00000412342 SYTL4Q96C24 671 aaPredicted RBP17.63■□□□□ 0.41
HDAC8-210ENST00000412342 MRC1P22897 1456 aa17.63■□□□□ 0.41
HDAC8-210ENST00000412342 FCHSD2O94868 740 aa17.62■□□□□ 0.41
HDAC8-210ENST00000412342 DCAF5Q96JK2 942 aa17.62■□□□□ 0.41
HDAC8-210ENST00000412342 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
HDAC8-210ENST00000412342 HSP90AB1P08238 724 aaKnown RBP17.61■□□□□ 0.41
HDAC8-210ENST00000412342 TXNRD1Q16881 649 aa17.61■□□□□ 0.41
HDAC8-210ENST00000412342 AKAP4Q5JQC9 854 aa17.61■□□□□ 0.41
HDAC8-210ENST00000412342 PIGBQ92521 554 aa17.6■□□□□ 0.41
HDAC8-210ENST00000412342 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
HDAC8-210ENST00000412342 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
HDAC8-210ENST00000412342 ERVV-2B6SEH9 535 aa17.59■□□□□ 0.41
HDAC8-210ENST00000412342 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
HDAC8-210ENST00000412342 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
HDAC8-210ENST00000412342 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.41
HDAC8-210ENST00000412342 PLEKHF1Q96S99 279 aa17.58■□□□□ 0.4
HDAC8-210ENST00000412342 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
HDAC8-210ENST00000412342 GAS2L2Q8NHY3 880 aa17.57■□□□□ 0.4
HDAC8-210ENST00000412342 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
HDAC8-210ENST00000412342 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
HDAC8-210ENST00000412342 TMOD3Q9NYL9 352 aa17.57■□□□□ 0.4
HDAC8-210ENST00000412342 C5P01031 1676 aa17.57■□□□□ 0.4
HDAC8-210ENST00000412342 PALLDQ8WX93 1383 aa17.56■□□□□ 0.4
HDAC8-210ENST00000412342 ZNF831Q5JPB2 1677 aa17.56■□□□□ 0.4
HDAC8-210ENST00000412342 LGR6Q9HBX8 967 aa17.56■□□□□ 0.4
HDAC8-210ENST00000412342 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
HDAC8-210ENST00000412342 CCDC184Q52MB2 194 aa17.55■□□□□ 0.4
HDAC8-210ENST00000412342 TUBGCP6Q96RT7 1819 aa17.55■□□□□ 0.4
HDAC8-210ENST00000412342 CICQ96RK0 1608 aaPredicted RBP17.54■□□□□ 0.4
HDAC8-210ENST00000412342 CASZ1Q86V15 1759 aa17.54■□□□□ 0.4
HDAC8-210ENST00000412342 SLC27A3Q5K4L6 730 aa17.54■□□□□ 0.4
HDAC8-210ENST00000412342 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
HDAC8-210ENST00000412342 QSER1Q2KHR3 1735 aa17.54■□□□□ 0.4
HDAC8-210ENST00000412342 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
HDAC8-210ENST00000412342 UBR2Q8IWV8 1755 aa17.53■□□□□ 0.4
HDAC8-210ENST00000412342 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
HDAC8-210ENST00000412342 ANP32CO43423 234 aa17.53■□□□□ 0.4
HDAC8-210ENST00000412342 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms