RNA–Protein interactions for RNA: ENST00000411706.1

KLF4-202, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-202ENST00000411706 DDX54Q8TDD1 881 aaKnown RBP25.98■■□□□ 1.75
KLF4-202ENST00000411706 BCL11BQ9C0K0 894 aaPredicted RBP25.98■■□□□ 1.75
KLF4-202ENST00000411706 IGSF1Q8N6C5 1336 aa25.96■■□□□ 1.75
KLF4-202ENST00000411706 PLEKHG2Q9H7P9 1386 aa25.95■■□□□ 1.75
KLF4-202ENST00000411706 PKD1L3Q7Z443 1732 aa25.95■■□□□ 1.74
KLF4-202ENST00000411706 EN1Q05925 392 aaPredicted RBP25.95■■□□□ 1.74
KLF4-202ENST00000411706 PARD3Q8TEW0 1356 aa25.95■■□□□ 1.74
KLF4-202ENST00000411706 PCDH11XQ9BZA7 1347 aa25.94■■□□□ 1.74
KLF4-202ENST00000411706 PCDH11YQ9BZA8 1340 aa25.94■■□□□ 1.74
KLF4-202ENST00000411706 NHSQ6T4R5 1651 aa25.94■■□□□ 1.74
KLF4-202ENST00000411706 IL13P35225 146 aa25.93■■□□□ 1.74
KLF4-202ENST00000411706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.93■■□□□ 1.74
KLF4-202ENST00000411706 SPG7Q9UQ90 795 aa25.93■■□□□ 1.74
KLF4-202ENST00000411706 RGPD3A6NKT7 1758 aaPredicted RBP25.92■■□□□ 1.74
KLF4-202ENST00000411706 RGPD4Q7Z3J3 1758 aa25.92■■□□□ 1.74
KLF4-202ENST00000411706 PLSCR1O15162 318 aa25.91■■□□□ 1.74
KLF4-202ENST00000411706 DIAPH1O60610 1272 aaKnown RBP25.91■■□□□ 1.74
KLF4-202ENST00000411706 DDX10Q13206 875 aaKnown RBP25.91■■□□□ 1.74
KLF4-202ENST00000411706 CAMKK2Q96RR4 588 aa25.9■■□□□ 1.74
KLF4-202ENST00000411706 CFAP53Q96M91 514 aa25.89■■□□□ 1.74
KLF4-202ENST00000411706 EZH2Q15910 746 aaKnown RBP25.88■■□□□ 1.73
KLF4-202ENST00000411706 ACSBG1Q96GR2 724 aa25.88■■□□□ 1.73
KLF4-202ENST00000411706 DOT1LQ8TEK3 1739 aa25.87■■□□□ 1.73
KLF4-202ENST00000411706 KCNQ2O43526 872 aa25.86■■□□□ 1.73
KLF4-202ENST00000411706 PPP2R1AP30153 589 aa25.86■■□□□ 1.73
KLF4-202ENST00000411706 SULT6B1Q6IMI4 303 aa25.86■■□□□ 1.73
KLF4-202ENST00000411706 RREB1Q92766 1687 aa25.86■■□□□ 1.73
KLF4-202ENST00000411706 BTAF1O14981 1849 aa25.86■■□□□ 1.73
KLF4-202ENST00000411706 KDRP35968 1356 aa25.85■■□□□ 1.73
KLF4-202ENST00000411706 AMOTQ4VCS5 1084 aa25.84■■□□□ 1.73
KLF4-202ENST00000411706 PLEKHO1Q53GL0 409 aaPredicted RBP25.84■■□□□ 1.73
KLF4-202ENST00000411706 PTF1AQ7RTS3 328 aa25.84■■□□□ 1.73
KLF4-202ENST00000411706 CYP27B1O15528 508 aa25.83■■□□□ 1.73
KLF4-202ENST00000411706 IFNL2Q8IZJ0 200 aa25.83■■□□□ 1.73
KLF4-202ENST00000411706 COL3A1P02461 1466 aaPredicted RBP25.82■■□□□ 1.72
KLF4-202ENST00000411706 PRIM1P49642 420 aaKnown RBP25.81■■□□□ 1.72
KLF4-202ENST00000411706 NKX1-1Q15270 411 aaPredicted RBP25.81■■□□□ 1.72
KLF4-202ENST00000411706 RALBP1Q15311 655 aa25.81■■□□□ 1.72
KLF4-202ENST00000411706 AEBP1Q8IUX7 1158 aa25.81■■□□□ 1.72
KLF4-202ENST00000411706 SYTL4Q96C24 671 aaPredicted RBP25.81■■□□□ 1.72
KLF4-202ENST00000411706 NUDCQ9Y266 331 aa25.8■■□□□ 1.72
KLF4-202ENST00000411706 NUP188Q5SRE5 1749 aa25.8■■□□□ 1.72
KLF4-202ENST00000411706 ITGB4P16144 1822 aa25.79■■□□□ 1.72
KLF4-202ENST00000411706 HSP90AB1P08238 724 aaKnown RBP25.78■■□□□ 1.72
KLF4-202ENST00000411706 PHKG2P15735 406 aa25.78■■□□□ 1.72
KLF4-202ENST00000411706 ZNF316A6NFI3 1004 aaPredicted RBP25.77■■□□□ 1.72
KLF4-202ENST00000411706 U2SURPO15042 1029 aaKnown RBP25.77■■□□□ 1.72
KLF4-202ENST00000411706 NBPF14Q5TI25 921 aa25.77■■□□□ 1.72
KLF4-202ENST00000411706 HMOX1P09601 288 aa25.76■■□□□ 1.71
KLF4-202ENST00000411706 TXNRD1Q16881 649 aa25.74■■□□□ 1.71
KLF4-202ENST00000411706 C1orf141Q5JVX7 400 aa25.74■■□□□ 1.71
KLF4-202ENST00000411706 ZNF530Q6P9A1 599 aaPredicted RBP25.74■■□□□ 1.71
KLF4-202ENST00000411706 TOGARAM1Q9Y4F4 1720 aa25.74■■□□□ 1.71
KLF4-202ENST00000411706 PROM2Q8N271 834 aa25.72■■□□□ 1.71
KLF4-202ENST00000411706 LY75O60449 1722 aa25.71■■□□□ 1.71
KLF4-202ENST00000411706 MPRIPQ6WCQ1 1025 aa25.71■■□□□ 1.71
KLF4-202ENST00000411706 DCAF5Q96JK2 942 aa25.71■■□□□ 1.71
KLF4-202ENST00000411706 SLC27A3Q5K4L6 730 aa25.69■■□□□ 1.7
KLF4-202ENST00000411706 ERVV-2B6SEH9 535 aa25.68■■□□□ 1.7
KLF4-202ENST00000411706 HMGB2P26583 209 aaKnown RBP25.68■■□□□ 1.7
KLF4-202ENST00000411706 AKAP4Q5JQC9 854 aa25.68■■□□□ 1.7
KLF4-202ENST00000411706 MYBBP1AQ9BQG0 1328 aaKnown RBP25.67■■□□□ 1.7
KLF4-202ENST00000411706 U2AF1L5P0DN76 240 aaPredicted RBP25.67■■□□□ 1.7
KLF4-202ENST00000411706 U2AF1Q01081 240 aaKnown RBP eCLIP25.67■■□□□ 1.7
KLF4-202ENST00000411706 TMOD3Q9NYL9 352 aa25.67■■□□□ 1.7
KLF4-202ENST00000411706 VIRMAQ69YN4 1812 aaKnown RBP25.67■■□□□ 1.7
KLF4-202ENST00000411706 R3HDM1Q15032 1099 aaKnown RBP25.66■■□□□ 1.7
KLF4-202ENST00000411706 SMARCC1Q92922 1105 aaPredicted RBP25.66■■□□□ 1.7
KLF4-202ENST00000411706 SCN11AQ9UI33 1791 aa25.66■■□□□ 1.7
KLF4-202ENST00000411706 FCHSD2O94868 740 aa25.65■■□□□ 1.7
KLF4-202ENST00000411706 PSDA5PKW4 1024 aaPredicted RBP25.64■■□□□ 1.7
KLF4-202ENST00000411706 PIGBQ92521 554 aa25.64■■□□□ 1.7
KLF4-202ENST00000411706 MTHFSDQ2M296 383 aaKnown RBP25.63■■□□□ 1.69
KLF4-202ENST00000411706 GAS2L2Q8NHY3 880 aa25.63■■□□□ 1.69
KLF4-202ENST00000411706 RSPH6AQ9H0K4 717 aa25.63■■□□□ 1.69
KLF4-202ENST00000411706 PRKRIP1Q9H875 184 aaPredicted RBP25.62■■□□□ 1.69
KLF4-202ENST00000411706 STK32BQ9NY57 414 aa25.62■■□□□ 1.69
KLF4-202ENST00000411706 PRKAR2BP31323 418 aa25.61■■□□□ 1.69
KLF4-202ENST00000411706 CABP4P57796 275 aa25.61■■□□□ 1.69
KLF4-202ENST00000411706 KDM6AO15550 1401 aaPredicted RBP25.61■■□□□ 1.69
KLF4-202ENST00000411706 PALLDQ8WX93 1383 aa25.6■■□□□ 1.69
KLF4-202ENST00000411706 CCNL1Q9UK58 526 aaPredicted RBP25.6■■□□□ 1.69
KLF4-202ENST00000411706 NEFMP07197 916 aa25.59■■□□□ 1.69
KLF4-202ENST00000411706 SLC15A2Q16348 729 aa25.59■■□□□ 1.69
KLF4-202ENST00000411706 PNNQ9H307 717 aaKnown RBP25.59■■□□□ 1.69
KLF4-202ENST00000411706 LRRC4BQ9NT99 713 aa25.59■■□□□ 1.69
KLF4-202ENST00000411706 PAPPAQ13219 1627 aa25.59■■□□□ 1.69
KLF4-202ENST00000411706 ANO8Q9HCE9 1232 aaPredicted RBP25.57■■□□□ 1.68
KLF4-202ENST00000411706 TAF1LQ8IZX4 1826 aa25.56■■□□□ 1.68
KLF4-202ENST00000411706 ADAMTS7Q9UKP4 1686 aa25.55■■□□□ 1.68
KLF4-202ENST00000411706 GNAT3A8MTJ3 354 aa25.55■■□□□ 1.68
KLF4-202ENST00000411706 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
KLF4-202ENST00000411706 C5P01031 1676 aa25.55■■□□□ 1.68
KLF4-202ENST00000411706 NFATC2IPQ8NCF5 419 aa25.54■■□□□ 1.68
KLF4-202ENST00000411706 PHACTR3Q96KR7 559 aa25.54■■□□□ 1.68
KLF4-202ENST00000411706 ASAP1Q9ULH1 1129 aa25.54■■□□□ 1.68
KLF4-202ENST00000411706 MAP3K5Q99683 1374 aa25.54■■□□□ 1.68
KLF4-202ENST00000411706 ATG3Q9NT62 314 aa25.53■■□□□ 1.68
KLF4-202ENST00000411706 QSER1Q2KHR3 1735 aa25.53■■□□□ 1.68
KLF4-202ENST00000411706 SLC52A2Q9HAB3 445 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms