RNA–Protein interactions for RNA: ENST00000409986.5

LOXL3-205, Transcript of lysyl oxidase like 3, humanhuman

TSL 2 BASIC

Gene LOXL3, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-205ENST00000409986 SLIT3O75094 1523 aa22.3■■□□□ 1.16
LOXL3-205ENST00000409986 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
LOXL3-205ENST00000409986 TBC1D32Q96NH3 1257 aa22.3■■□□□ 1.16
LOXL3-205ENST00000409986 GCP02774 474 aa22.29■■□□□ 1.16
LOXL3-205ENST00000409986 LMOD2Q6P5Q4 547 aa22.29■■□□□ 1.16
LOXL3-205ENST00000409986 IP6K1Q92551 441 aa22.29■■□□□ 1.16
LOXL3-205ENST00000409986 UPF2Q9HAU5 1272 aaKnown RBP22.28■■□□□ 1.16
LOXL3-205ENST00000409986 SMC4Q9NTJ3 1288 aa22.28■■□□□ 1.16
LOXL3-205ENST00000409986 TRIM27P14373 513 aa22.27■■□□□ 1.16
LOXL3-205ENST00000409986 DCTN1Q14203 1278 aa22.27■■□□□ 1.16
LOXL3-205ENST00000409986 SSH1Q8WYL5 1049 aa22.27■■□□□ 1.16
LOXL3-205ENST00000409986 ALS2Q96Q42 1657 aa22.27■■□□□ 1.16
LOXL3-205ENST00000409986 PLEKHG5O94827 1062 aa22.26■■□□□ 1.15
LOXL3-205ENST00000409986 HDAC1Q13547 482 aaPredicted RBP22.26■■□□□ 1.15
LOXL3-205ENST00000409986 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
LOXL3-205ENST00000409986 ZNF853P0CG23 659 aa22.26■■□□□ 1.15
LOXL3-205ENST00000409986 LMOD3Q0VAK6 560 aa22.26■■□□□ 1.15
LOXL3-205ENST00000409986 ATF7IPQ6VMQ6 1270 aa22.25■■□□□ 1.15
LOXL3-205ENST00000409986 ARHGEF25Q86VW2 580 aa22.25■■□□□ 1.15
LOXL3-205ENST00000409986 DDX19BQ9UMR2 479 aa22.25■■□□□ 1.15
LOXL3-205ENST00000409986 PHRF1Q9P1Y6 1649 aaKnown RBP22.25■■□□□ 1.15
LOXL3-205ENST00000409986 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
LOXL3-205ENST00000409986 CALD1Q05682 793 aaKnown RBP22.23■■□□□ 1.15
LOXL3-205ENST00000409986 MTHFSDQ2M296 383 aaKnown RBP22.23■■□□□ 1.15
LOXL3-205ENST00000409986 ANTXR1Q9H6X2 564 aa22.23■■□□□ 1.15
LOXL3-205ENST00000409986 NPHP3Q7Z494 1330 aa22.22■■□□□ 1.15
LOXL3-205ENST00000409986 MED1Q15648 1581 aaPredicted RBP22.22■■□□□ 1.15
LOXL3-205ENST00000409986 ZBTB7CA1YPR0 619 aa22.22■■□□□ 1.15
LOXL3-205ENST00000409986 GNAI1P63096 354 aa22.21■■□□□ 1.15
LOXL3-205ENST00000409986 BRINP3Q76B58 766 aa22.21■■□□□ 1.15
LOXL3-205ENST00000409986 CFAP44Q96MT7 982 aa22.21■■□□□ 1.15
LOXL3-205ENST00000409986 MBIPQ9NS73 344 aa22.21■■□□□ 1.15
LOXL3-205ENST00000409986 PXDNQ92626 1479 aa22.21■■□□□ 1.15
LOXL3-205ENST00000409986 NOB1Q9ULX3 412 aaKnown RBP22.21■■□□□ 1.15
LOXL3-205ENST00000409986 MCM10Q7L590 875 aa22.2■■□□□ 1.14
LOXL3-205ENST00000409986 USHBP1Q8N6Y0 703 aa22.2■■□□□ 1.14
LOXL3-205ENST00000409986 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
LOXL3-205ENST00000409986 SMC5Q8IY18 1101 aa22.19■■□□□ 1.14
LOXL3-205ENST00000409986 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
LOXL3-205ENST00000409986 ITPRIPQ8IWB1 547 aa22.19■■□□□ 1.14
LOXL3-205ENST00000409986 TBC1D2Q9BYX2 928 aa22.19■■□□□ 1.14
LOXL3-205ENST00000409986 BRPF3Q9ULD4 1205 aa22.18■■□□□ 1.14
LOXL3-205ENST00000409986 ZBTB40Q9NUA8 1239 aa22.18■■□□□ 1.14
LOXL3-205ENST00000409986 SLAIN2Q9P270 581 aa22.18■■□□□ 1.14
LOXL3-205ENST00000409986 AXIN2Q9Y2T1 843 aa22.18■■□□□ 1.14
LOXL3-205ENST00000409986 KIF16BQ96L93 1317 aa22.17■■□□□ 1.14
LOXL3-205ENST00000409986 ALDH1L2Q3SY69 923 aa22.17■■□□□ 1.14
LOXL3-205ENST00000409986 TMEM57Q8N5G2 664 aa22.17■■□□□ 1.14
LOXL3-205ENST00000409986 TNS3Q68CZ2 1445 aa22.17■■□□□ 1.14
LOXL3-205ENST00000409986 IPO8O15397 1037 aaKnown RBP22.16■■□□□ 1.14
LOXL3-205ENST00000409986 TSPYL6Q8N831 410 aa22.16■■□□□ 1.14
LOXL3-205ENST00000409986 SLKQ9H2G2 1235 aaPredicted RBP22.16■■□□□ 1.14
LOXL3-205ENST00000409986 SPATA31A3Q5VYP0 1347 aa22.16■■□□□ 1.14
LOXL3-205ENST00000409986 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
LOXL3-205ENST00000409986 GAS2L2Q8NHY3 880 aa22.15■■□□□ 1.14
LOXL3-205ENST00000409986 CRB1P82279 1406 aa22.15■■□□□ 1.14
LOXL3-205ENST00000409986 VAMP4O75379 141 aa22.14■■□□□ 1.14
LOXL3-205ENST00000409986 BRPF1P55201 1214 aaPredicted RBP22.14■■□□□ 1.14
LOXL3-205ENST00000409986 ZC3H6P61129 1189 aaKnown RBP22.14■■□□□ 1.14
LOXL3-205ENST00000409986 RGPD2P0DJD1 1756 aa22.14■■□□□ 1.14
LOXL3-205ENST00000409986 CABLES1Q8TDN4 633 aa22.14■■□□□ 1.13
LOXL3-205ENST00000409986 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
LOXL3-205ENST00000409986 CHL1O00533 1208 aa22.13■■□□□ 1.13
LOXL3-205ENST00000409986 C8orf58Q8NAV2 365 aa22.13■■□□□ 1.13
LOXL3-205ENST00000409986 ANKRD24Q8TF21 1146 aa22.12■■□□□ 1.13
LOXL3-205ENST00000409986 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
LOXL3-205ENST00000409986 ELL2O00472 640 aaPredicted RBP22.11■■□□□ 1.13
LOXL3-205ENST00000409986 RTN4Q9NQC3 1192 aaKnown RBP22.11■■□□□ 1.13
LOXL3-205ENST00000409986 NCAPD2Q15021 1401 aa22.1■■□□□ 1.13
LOXL3-205ENST00000409986 RTF1Q92541 710 aaKnown RBP22.1■■□□□ 1.13
LOXL3-205ENST00000409986 CRYBG1Q9Y4K1 1723 aa22.1■■□□□ 1.13
LOXL3-205ENST00000409986 SOS2Q07890 1332 aaPredicted RBP22.09■■□□□ 1.13
LOXL3-205ENST00000409986 NUCB1Q02818 461 aa22.09■■□□□ 1.13
LOXL3-205ENST00000409986 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
LOXL3-205ENST00000409986 RGPD5Q99666 1765 aa22.08■■□□□ 1.13
LOXL3-205ENST00000409986 GNAT3A8MTJ3 354 aa22.08■■□□□ 1.13
LOXL3-205ENST00000409986 HTATSF1O43719 755 aaKnown RBP22.08■■□□□ 1.13
LOXL3-205ENST00000409986 ERBB3P21860 1342 aa22.07■■□□□ 1.12
LOXL3-205ENST00000409986 MFAP1P55081 439 aaKnown RBP22.07■■□□□ 1.12
LOXL3-205ENST00000409986 KRT24Q2M2I5 525 aa22.07■■□□□ 1.12
LOXL3-205ENST00000409986 MIS18AQ9NYP9 233 aa22.07■■□□□ 1.12
LOXL3-205ENST00000409986 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
LOXL3-205ENST00000409986 IL17REQ8NFR9 667 aa22.06■■□□□ 1.12
LOXL3-205ENST00000409986 CAMTA1Q9Y6Y1 1673 aa22.06■■□□□ 1.12
LOXL3-205ENST00000409986 COL18A1P39060 1754 aa22.06■■□□□ 1.12
LOXL3-205ENST00000409986 LRRC37A3O60309 1634 aa22.05■■□□□ 1.12
LOXL3-205ENST00000409986 ARHGAP45Q92619 1136 aa22.05■■□□□ 1.12
LOXL3-205ENST00000409986 MRPL50Q8N5N7 158 aaKnown RBP22.04■■□□□ 1.12
LOXL3-205ENST00000409986 CHRNA2Q15822 529 aa22.02■■□□□ 1.12
LOXL3-205ENST00000409986 CHD1LQ86WJ1 897 aa22.02■■□□□ 1.12
LOXL3-205ENST00000409986 LMO7Q8WWI1 1683 aa22.02■■□□□ 1.12
LOXL3-205ENST00000409986 KIAA0232Q92628 1395 aa22.02■■□□□ 1.12
LOXL3-205ENST00000409986 ZBTB7BO15156 539 aaPredicted RBP22.02■■□□□ 1.12
LOXL3-205ENST00000409986 CHMP4BQ9H444 224 aaKnown RBP22.02■■□□□ 1.12
LOXL3-205ENST00000409986 TSPYL4Q9UJ04 414 aa22.01■■□□□ 1.11
LOXL3-205ENST00000409986 CPDO75976 1380 aa22.01■■□□□ 1.11
LOXL3-205ENST00000409986 RBM25P49756 843 aaKnown RBP22.01■■□□□ 1.11
LOXL3-205ENST00000409986 CHMP5Q9NZZ3 219 aa22■■□□□ 1.11
LOXL3-205ENST00000409986 CEMIPQ8WUJ3 1361 aa21.99■■□□□ 1.11
LOXL3-205ENST00000409986 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms