RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 R3HCC1Q9Y3T6 440 aaKnown RBP15.8■□□□□ 0.12
CACNA1C-222ENST00000406454 SMC2O95347 1197 aa15.8■□□□□ 0.12
CACNA1C-222ENST00000406454 FMNL2Q96PY5 1086 aa15.79■□□□□ 0.12
CACNA1C-222ENST00000406454 C14orf93Q9H972 538 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-222ENST00000406454 TXLNAP40222 546 aa15.79■□□□□ 0.12
CACNA1C-222ENST00000406454 TAF7Q15545 349 aaPredicted RBP15.79■□□□□ 0.12
CACNA1C-222ENST00000406454 KIF1BPQ96EK5 621 aa15.79■□□□□ 0.12
CACNA1C-222ENST00000406454 CTNNA3Q9UI47 895 aa15.79■□□□□ 0.12
CACNA1C-222ENST00000406454 MX1P20591 662 aa15.79■□□□□ 0.12
CACNA1C-222ENST00000406454 NSD2O96028 1365 aa15.78■□□□□ 0.12
CACNA1C-222ENST00000406454 KRT32Q14532 448 aa15.78■□□□□ 0.12
CACNA1C-222ENST00000406454 PHF8Q9UPP1 1060 aa15.78■□□□□ 0.12
CACNA1C-222ENST00000406454 DHX29Q7Z478 1369 aaKnown RBP15.78■□□□□ 0.12
CACNA1C-222ENST00000406454 CCDC69A6NI79 296 aa15.78■□□□□ 0.12
CACNA1C-222ENST00000406454 AMOTL2Q9Y2J4 779 aa15.78■□□□□ 0.12
CACNA1C-222ENST00000406454 CCDC192P0DO97 292 aa15.77■□□□□ 0.12
CACNA1C-222ENST00000406454 OFD1O75665 1012 aa15.77■□□□□ 0.12
CACNA1C-222ENST00000406454 DISP3Q9P2K9 1392 aa15.77■□□□□ 0.12
CACNA1C-222ENST00000406454 RAB11FIP3O75154 756 aa15.77■□□□□ 0.12
CACNA1C-222ENST00000406454 AMOTQ4VCS5 1084 aa15.77■□□□□ 0.12
CACNA1C-222ENST00000406454 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
CACNA1C-222ENST00000406454 EPS15P42566 896 aa15.77■□□□□ 0.11
CACNA1C-222ENST00000406454 FILIP1LQ4L180 1135 aa15.77■□□□□ 0.11
CACNA1C-222ENST00000406454 ME1P48163 572 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 USHBP1Q8N6Y0 703 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 CDK5RAP3Q96JB5 506 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 LRPPRCP42704 1394 aaKnown RBP15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 TEX35Q5T0J7 233 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 MCM4P33991 863 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 SMARCA5O60264 1052 aaPredicted RBP15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 GLRX3O76003 335 aaKnown RBP15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 BRPF3Q9ULD4 1205 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 FANCAO15360 1455 aa15.76■□□□□ 0.11
CACNA1C-222ENST00000406454 PIP4K2AP48426 406 aaPredicted RBP15.75■□□□□ 0.11
CACNA1C-222ENST00000406454 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
CACNA1C-222ENST00000406454 NUP133Q8WUM0 1156 aa15.75■□□□□ 0.11
CACNA1C-222ENST00000406454 STARD3NLO95772 234 aa15.74■□□□□ 0.11
CACNA1C-222ENST00000406454 CDKL5O76039 1030 aa15.74■□□□□ 0.11
CACNA1C-222ENST00000406454 PATL2C9JE40 543 aaKnown RBP15.74■□□□□ 0.11
CACNA1C-222ENST00000406454 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
CACNA1C-222ENST00000406454 ACBD3Q9H3P7 528 aa15.74■□□□□ 0.11
CACNA1C-222ENST00000406454 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
CACNA1C-222ENST00000406454 SPATA32Q96LK8 384 aa15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 MAGEC2Q9UBF1 373 aaPredicted RBP15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 GRPEL1Q9HAV7 217 aa15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 F6X3S4 739 aa15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 CT47A1Q5JQC4 288 aaPredicted RBP15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 SMARCE1Q969G3 411 aa15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 TDO2P48775 406 aa15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 RAI14Q9P0K7 980 aa15.73■□□□□ 0.11
CACNA1C-222ENST00000406454 CCP110O43303 1012 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 TRIM27P14373 513 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 SKAP1Q86WV1 359 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 MYD88Q99836 296 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 CASTP20810 708 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 RUFY1Q96T51 708 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 DNAAF4Q8WXU2 420 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 UBAC1Q9BSL1 405 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 PTCD1O75127 700 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 IDH1O75874 414 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 PDIA4P13667 645 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 TTC21BQ7Z4L5 1316 aa15.72■□□□□ 0.11
CACNA1C-222ENST00000406454 VSIG10Q8N0Z9 540 aa15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 SPC24Q8NBT2 197 aa15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 DACH1Q9UI36 760 aa15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 IMMTQ16891 758 aaKnown RBP15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 CFAP45Q9UL16 551 aa15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 ANKRD36BQ8N2N9 1353 aa15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 CCAR1Q8IX12 1150 aaKnown RBP15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 TMOD3Q9NYL9 352 aa15.71■□□□□ 0.11
CACNA1C-222ENST00000406454 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.1
CACNA1C-222ENST00000406454 SERPINC1P01008 464 aa15.71■□□□□ 0.1
CACNA1C-222ENST00000406454 KRT18P05783 430 aaKnown RBP15.71■□□□□ 0.1
CACNA1C-222ENST00000406454 SETQ01105 290 aaPredicted RBP15.71■□□□□ 0.1
CACNA1C-222ENST00000406454 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.1
CACNA1C-222ENST00000406454 BRPF1P55201 1214 aaPredicted RBP15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 METTL24Q5JXM2 366 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 FOXO3O43524 673 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 CEBPAP49715 358 aaPredicted RBP15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 PRPF40BQ6NWY9 871 aaKnown RBP15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 LRP2BPQ9P2M1 347 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 BCL11BQ9C0K0 894 aaPredicted RBP15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 PTPRCP08575 1304 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 AK7Q96M32 723 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 SOGA3Q5TF21 947 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 AIDAQ96BJ3 306 aa15.7■□□□□ 0.1
CACNA1C-222ENST00000406454 DHX8Q14562 1220 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms