RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MRE11P49959 708 aa14.12□□□□□ -0.15
RAPGEF3-204ENST00000405493 GOLGA6L19H0YKK7 550 aa14.12□□□□□ -0.15
RAPGEF3-204ENST00000405493 PPP1R42Q7Z4L9 355 aa14.12□□□□□ -0.15
RAPGEF3-204ENST00000405493 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF3-204ENST00000405493 HYPKQ9NX55 129 aa14.11□□□□□ -0.15
RAPGEF3-204ENST00000405493 BRMS1Q9HCU9 246 aa14.11□□□□□ -0.15
RAPGEF3-204ENST00000405493 ARHGEF10O15013 1369 aa14.11□□□□□ -0.15
RAPGEF3-204ENST00000405493 RPRD2Q5VT52 1461 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-204ENST00000405493 TARBP1Q13395 1621 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-204ENST00000405493 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 CAVIN4Q5BKX8 364 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 USHBP1Q8N6Y0 703 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 C22orf23Q9BZE7 217 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 AKAP2Q9Y2D5 859 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 SLF2Q8IX21 1173 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 IFT57Q9NWB7 429 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 PPIP5K1Q6PFW1 1433 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 TCOF1Q13428 1488 aaKnown RBP14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 BECN2A8MW95 431 aa14.1□□□□□ -0.15
RAPGEF3-204ENST00000405493 IFIT1P09914 478 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 TMPOP42166 694 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 EMILIN1Q9Y6C2 1016 aa14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 FOSBP53539 338 aa14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 TPM3P06753 285 aa14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 PSMA5P28066 241 aa14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 STK32BQ9NY57 414 aa14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 DBF4Q9UBU7 674 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-204ENST00000405493 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.16
RAPGEF3-204ENST00000405493 TRMT112Q9UI30 125 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-204ENST00000405493 CDC45O75419 566 aa14.08□□□□□ -0.16
RAPGEF3-204ENST00000405493 ZSCAN29Q8IWY8 852 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-204ENST00000405493 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-204ENST00000405493 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-204ENST00000405493 ZNF287Q9HBT7 754 aa14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 SNRPA1P09661 255 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 CDC5LQ99459 802 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 ANKIB1Q9P2G1 1089 aa14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 TMEM2Q9UHN6 1383 aa14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 DDX46Q7L014 1031 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 GCC1Q96CN9 775 aa14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
RAPGEF3-204ENST00000405493 PDE3AQ14432 1141 aa14.06□□□□□ -0.16
RAPGEF3-204ENST00000405493 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
RAPGEF3-204ENST00000405493 BAG6P46379 1132 aa14.06□□□□□ -0.16
RAPGEF3-204ENST00000405493 CCDC184Q52MB2 194 aa14.06□□□□□ -0.16
RAPGEF3-204ENST00000405493 TPM2P07951 284 aa14.06□□□□□ -0.16
RAPGEF3-204ENST00000405493 BICD2Q8TD16 824 aa14.06□□□□□ -0.16
RAPGEF3-204ENST00000405493 NOB1Q9ULX3 412 aaKnown RBP14.06□□□□□ -0.16
RAPGEF3-204ENST00000405493 GCP02774 474 aa14.05□□□□□ -0.16
RAPGEF3-204ENST00000405493 METTL24Q5JXM2 366 aa14.05□□□□□ -0.16
RAPGEF3-204ENST00000405493 TRAK2O60296 914 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 IFIT5Q13325 482 aaKnown RBP14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 RAI14Q9P0K7 980 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 ATP6V1AP38606 617 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 TNNT3P45378 269 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 TFCP2L1Q9NZI6 479 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 HOOK1Q9UJC3 728 aaKnown RBP14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 BCAR3O75815 825 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 TSR1Q2NL82 804 aaKnown RBP14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 MCM10Q7L590 875 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
RAPGEF3-204ENST00000405493 ANKRD18BA2A2Z9 1011 aa14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 BTG4Q9NY30 223 aa14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 ZNF622Q969S3 477 aaKnown RBP eCLIP14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 LRP2BPQ9P2M1 347 aa14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 R3HCC1Q9Y3T6 440 aaKnown RBP14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 NBPF5PQ86XG9 351 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 PARP3Q9Y6F1 533 aa14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 ZNF772Q68DY9 489 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 USP21Q9UK80 565 aa14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 RTCBQ9Y3I0 505 aaKnown RBP14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
RAPGEF3-204ENST00000405493 WWC2Q6AWC2 1192 aa14.02□□□□□ -0.16
RAPGEF3-204ENST00000405493 SETDB2Q96T68 719 aa14.02□□□□□ -0.16
RAPGEF3-204ENST00000405493 LRRCC1Q9C099 1032 aa14.02□□□□□ -0.16
RAPGEF3-204ENST00000405493 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.16
RAPGEF3-204ENST00000405493 FLT4P35916 1363 aa14.02□□□□□ -0.16
RAPGEF3-204ENST00000405493 NUCB2P80303 420 aa14.02□□□□□ -0.16
RAPGEF3-204ENST00000405493 NYXQ9GZU5 481 aa14.02□□□□□ -0.16
RAPGEF3-204ENST00000405493 AKAP4Q5JQC9 854 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 PCDH11XQ9BZA7 1347 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 PCDH11YQ9BZA8 1340 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 SRGAP3O43295 1099 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 ATF7IPQ6VMQ6 1270 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 SIRT1Q96EB6 747 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 TPM1P09493 284 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 SLC5A1P13866 664 aa14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 RPAP2Q8IXW5 612 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF3-204ENST00000405493 C16orf71Q8IYS4 520 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms