RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 TTC21AQ8NDW8 1320 aa4.86□□□□□ -1.63
RTN4-209ENST00000405240 COG3Q96JB2 828 aa4.86□□□□□ -1.63
RTN4-209ENST00000405240 API5Q9BZZ5 524 aaKnown RBP4.86□□□□□ -1.63
RTN4-209ENST00000405240 TWISTNBQ3B726 338 aaPredicted RBP4.86□□□□□ -1.63
RTN4-209ENST00000405240 TXNDC2Q86VQ3 553 aa4.86□□□□□ -1.63
RTN4-209ENST00000405240 IL17RAQ96F46 866 aa4.86□□□□□ -1.63
RTN4-209ENST00000405240 CIZ1Q9ULV3 898 aaPredicted RBP4.86□□□□□ -1.63
RTN4-209ENST00000405240 PTPRCP08575 1304 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 NCKAP5LQ9HCH0 1330 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 CHMP5Q9NZZ3 219 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 SBNO1A3KN83 1393 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 NFAT5O94916 1531 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 HMOX1P09601 288 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 MCM4P33991 863 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 THUMPD2Q9BTF0 503 aaKnown RBP4.85□□□□□ -1.63
RTN4-209ENST00000405240 PLEKHM2Q8IWE5 1019 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 ANKRD44Q8N8A2 993 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 NCAPD2Q15021 1401 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 RGPD2P0DJD1 1756 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 AK9Q5TCS8 1911 aa4.85□□□□□ -1.63
RTN4-209ENST00000405240 ACEP12821 1306 aa4.84□□□□□ -1.63
RTN4-209ENST00000405240 GSPT1P15170 499 aaKnown RBP4.84□□□□□ -1.63
RTN4-209ENST00000405240 LTKP29376 864 aa4.84□□□□□ -1.63
RTN4-209ENST00000405240 STAG3Q9UJ98 1225 aa4.84□□□□□ -1.63
RTN4-209ENST00000405240 SOS1Q07889 1333 aaPredicted RBP4.84□□□□□ -1.63
RTN4-209ENST00000405240 IGSF1Q8N6C5 1336 aa4.84□□□□□ -1.63
RTN4-209ENST00000405240 SALL3Q9BXA9 1300 aa4.84□□□□□ -1.63
RTN4-209ENST00000405240 HTATSF1O43719 755 aaKnown RBP4.84□□□□□ -1.63
RTN4-209ENST00000405240 RAB3GAP1Q15042 981 aa4.84□□□□□ -1.63
RTN4-209ENST00000405240 RRS1Q15050 365 aaKnown RBP4.84□□□□□ -1.63
RTN4-209ENST00000405240 BRPF3Q9ULD4 1205 aa4.84□□□□□ -1.63
RTN4-209ENST00000405240 TRPM3Q9HCF6 1732 aaPredicted RBP4.84□□□□□ -1.63
RTN4-209ENST00000405240 FAM83GA6ND36 823 aa4.84□□□□□ -1.64
RTN4-209ENST00000405240 TBC1D9Q6ZT07 1266 aa4.84□□□□□ -1.64
RTN4-209ENST00000405240 RPAP2Q8IXW5 612 aaPredicted RBP4.84□□□□□ -1.64
RTN4-209ENST00000405240 OSBPL3Q9H4L5 887 aa4.84□□□□□ -1.64
RTN4-209ENST00000405240 TBX22Q9Y458 520 aa4.84□□□□□ -1.64
RTN4-209ENST00000405240 EIF5BO60841 1220 aaKnown RBP4.83□□□□□ -1.64
RTN4-209ENST00000405240 MFAP1P55081 439 aaKnown RBP4.83□□□□□ -1.64
RTN4-209ENST00000405240 FAM43AQ8N2R8 423 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 LNPKQ9C0E8 428 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 HAP1P54257 671 aaPredicted RBP4.83□□□□□ -1.64
RTN4-209ENST00000405240 TTC22Q5TAA0 569 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 AEBP1Q8IUX7 1158 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 BABAM1Q9NWV8 329 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 FLT4P35916 1363 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 CEP85Q6P2H3 762 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 ISY1Q9ULR0 285 aaKnown RBP4.83□□□□□ -1.64
RTN4-209ENST00000405240 MSH6P52701 1360 aa4.83□□□□□ -1.64
RTN4-209ENST00000405240 SLKQ9H2G2 1235 aaPredicted RBP4.82□□□□□ -1.64
RTN4-209ENST00000405240 MST1RQ04912 1400 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 MAP3K19Q56UN5 1328 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 IBTKQ9P2D0 1353 aaPredicted RBP4.82□□□□□ -1.64
RTN4-209ENST00000405240 CDC45O75419 566 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 CD2BP2O95400 341 aaKnown RBP4.82□□□□□ -1.64
RTN4-209ENST00000405240 CYP2E1P05181 493 aaPredicted RBP4.82□□□□□ -1.64
RTN4-209ENST00000405240 L1TD1Q5T7N2 865 aaKnown RBP4.82□□□□□ -1.64
RTN4-209ENST00000405240 ANKRD45Q5TZF3 282 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 SLIT3O75094 1523 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 USP26Q9BXU7 913 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 ABCC6O95255 1503 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 DCTN1Q14203 1278 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 SULT6B1Q6IMI4 303 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 HSCBQ8IWL3 235 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 C1orf115Q9H7X2 142 aa4.82□□□□□ -1.64
RTN4-209ENST00000405240 OVOS2A0A0G2JMS6 1433 aa4.81□□□□□ -1.64
RTN4-209ENST00000405240 DDX11L8A8MPP1 907 aa4.81□□□□□ -1.64
RTN4-209ENST00000405240 HSP90AB2PQ58FF8 381 aa4.81□□□□□ -1.64
RTN4-209ENST00000405240 CEMIPQ8WUJ3 1361 aa4.81□□□□□ -1.64
RTN4-209ENST00000405240 K7ELQ4 463 aaPredicted RBP4.81□□□□□ -1.64
RTN4-209ENST00000405240 XRCC6P12956 609 aaKnown RBP eCLIP4.81□□□□□ -1.64
RTN4-209ENST00000405240 TNPO1Q92973 898 aaKnown RBP4.81□□□□□ -1.64
RTN4-209ENST00000405240 ADAMTSL3P82987 1691 aa4.81□□□□□ -1.64
RTN4-209ENST00000405240 TRAK2O60296 914 aa4.81□□□□□ -1.64
RTN4-209ENST00000405240 PTMSP20962 102 aa4.81□□□□□ -1.64
RTN4-209ENST00000405240 MTHFSDQ2M296 383 aaKnown RBP4.81□□□□□ -1.64
RTN4-209ENST00000405240 ALS2Q96Q42 1657 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 ADGRL3Q9HAR2 1447 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 SCN11AQ9UI33 1791 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 RABEP1Q15276 862 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 KRT24Q2M2I5 525 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 MCM10Q7L590 875 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 EPB41L2O43491 1005 aaKnown RBP4.8□□□□□ -1.64
RTN4-209ENST00000405240 CCT4P50991 539 aaKnown RBP4.8□□□□□ -1.64
RTN4-209ENST00000405240 EYA1Q99502 592 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 STAP2Q9UGK3 403 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 AOX1Q06278 1338 aa4.8□□□□□ -1.64
RTN4-209ENST00000405240 KIF1AQ12756 1690 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 COL18A1P39060 1754 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 RGPD5Q99666 1765 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 C16orf71Q8IYS4 520 aaPredicted RBP4.79□□□□□ -1.64
RTN4-209ENST00000405240 AMOTL2Q9Y2J4 779 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 ELL2O00472 640 aaPredicted RBP4.79□□□□□ -1.64
RTN4-209ENST00000405240 SDSP20132 328 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 SKOR2Q2VWA4 1001 aaPredicted RBP4.79□□□□□ -1.64
RTN4-209ENST00000405240 GAS2L2Q8NHY3 880 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 MEIS3Q99687 375 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 HEG1Q9ULI3 1381 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 C5P01031 1676 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 MLECQ14165 292 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms