RNA–Protein interactions for RNA: ENST00000405108.5

EFR3B-205, Transcript of EFR3 homolog B, humanhuman

TSL 1 (best) BASIC

Gene EFR3B, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-205ENST00000405108 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
EFR3B-205ENST00000405108 ORAI2Q96SN7 254 aa17.26■□□□□ 0.35
EFR3B-205ENST00000405108 EYA1Q99502 592 aa17.26■□□□□ 0.35
EFR3B-205ENST00000405108 XPCQ01831 940 aaPredicted RBP17.26■□□□□ 0.35
EFR3B-205ENST00000405108 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
EFR3B-205ENST00000405108 ARHGEF10O15013 1369 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 TMEM94Q12767 1356 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 ZNF335Q9H4Z2 1342 aaPredicted RBP17.25■□□□□ 0.35
EFR3B-205ENST00000405108 FOXO3O43524 673 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 VAMP4O75379 141 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
EFR3B-205ENST00000405108 HOXC9P31274 260 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 PSME1Q06323 249 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
EFR3B-205ENST00000405108 LTV1Q96GA3 475 aaPredicted RBP17.24■□□□□ 0.35
EFR3B-205ENST00000405108 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
EFR3B-205ENST00000405108 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
EFR3B-205ENST00000405108 USP54Q70EL1 1684 aa17.23■□□□□ 0.35
EFR3B-205ENST00000405108 HSP90AA2PQ14568 343 aaPredicted RBP17.23■□□□□ 0.35
EFR3B-205ENST00000405108 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
EFR3B-205ENST00000405108 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
EFR3B-205ENST00000405108 TMEM57Q8N5G2 664 aa17.22■□□□□ 0.35
EFR3B-205ENST00000405108 LTN1O94822 1766 aa17.22■□□□□ 0.35
EFR3B-205ENST00000405108 KDRP35968 1356 aa17.22■□□□□ 0.35
EFR3B-205ENST00000405108 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
EFR3B-205ENST00000405108 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
EFR3B-205ENST00000405108 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
EFR3B-205ENST00000405108 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
EFR3B-205ENST00000405108 IPO4Q8TEX9 1081 aaKnown RBP17.2■□□□□ 0.34
EFR3B-205ENST00000405108 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
EFR3B-205ENST00000405108 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
EFR3B-205ENST00000405108 MRPL50Q8N5N7 158 aaKnown RBP17.19■□□□□ 0.34
EFR3B-205ENST00000405108 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
EFR3B-205ENST00000405108 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
EFR3B-205ENST00000405108 ATF3P18847 181 aa17.18■□□□□ 0.34
EFR3B-205ENST00000405108 ANP32AP39687 249 aaKnown RBP17.18■□□□□ 0.34
EFR3B-205ENST00000405108 MIS18AQ9NYP9 233 aa17.18■□□□□ 0.34
EFR3B-205ENST00000405108 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
EFR3B-205ENST00000405108 NFAT5O94916 1531 aa17.18■□□□□ 0.34
EFR3B-205ENST00000405108 CHL1O00533 1208 aa17.17■□□□□ 0.34
EFR3B-205ENST00000405108 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
EFR3B-205ENST00000405108 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
EFR3B-205ENST00000405108 CRB1P82279 1406 aa17.17■□□□□ 0.34
EFR3B-205ENST00000405108 BRPF1P55201 1214 aaPredicted RBP17.16■□□□□ 0.34
EFR3B-205ENST00000405108 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
EFR3B-205ENST00000405108 C8orf34Q49A92 452 aa17.15■□□□□ 0.34
EFR3B-205ENST00000405108 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
EFR3B-205ENST00000405108 ADRA2BP18089 450 aa17.15■□□□□ 0.34
EFR3B-205ENST00000405108 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
EFR3B-205ENST00000405108 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
EFR3B-205ENST00000405108 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
EFR3B-205ENST00000405108 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
EFR3B-205ENST00000405108 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
EFR3B-205ENST00000405108 IP6K1Q92551 441 aa17.13■□□□□ 0.33
EFR3B-205ENST00000405108 C1orf167Q5SNV9 1468 aa17.13■□□□□ 0.33
EFR3B-205ENST00000405108 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
EFR3B-205ENST00000405108 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
EFR3B-205ENST00000405108 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
EFR3B-205ENST00000405108 PDZRN3Q9UPQ7 1066 aa17.12■□□□□ 0.33
EFR3B-205ENST00000405108 MSH6P52701 1360 aa17.12■□□□□ 0.33
EFR3B-205ENST00000405108 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
EFR3B-205ENST00000405108 GCP02774 474 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 IPO9Q96P70 1041 aaKnown RBP17.11■□□□□ 0.33
EFR3B-205ENST00000405108 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 TSPYL4Q9UJ04 414 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 PRDM4Q9UKN5 801 aa17.11■□□□□ 0.33
EFR3B-205ENST00000405108 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
EFR3B-205ENST00000405108 MST1RQ04912 1400 aa17.1■□□□□ 0.33
EFR3B-205ENST00000405108 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
EFR3B-205ENST00000405108 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
EFR3B-205ENST00000405108 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
EFR3B-205ENST00000405108 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
EFR3B-205ENST00000405108 ABCC4O15439 1325 aa17.1■□□□□ 0.33
EFR3B-205ENST00000405108 C1orf115Q9H7X2 142 aa17.1■□□□□ 0.33
EFR3B-205ENST00000405108 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
EFR3B-205ENST00000405108 GNAT3A8MTJ3 354 aa17.09■□□□□ 0.33
EFR3B-205ENST00000405108 BCCIPQ9P287 314 aaKnown RBP eCLIP17.09■□□□□ 0.33
EFR3B-205ENST00000405108 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
EFR3B-205ENST00000405108 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
EFR3B-205ENST00000405108 ZBTB7BO15156 539 aaPredicted RBP17.09■□□□□ 0.33
EFR3B-205ENST00000405108 CHMP4BQ9H444 224 aaKnown RBP17.09■□□□□ 0.33
EFR3B-205ENST00000405108 HDAC1Q13547 482 aaPredicted RBP17.08■□□□□ 0.33
EFR3B-205ENST00000405108 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
EFR3B-205ENST00000405108 GTF2E1P29083 439 aaPredicted RBP17.07■□□□□ 0.32
EFR3B-205ENST00000405108 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
EFR3B-205ENST00000405108 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
EFR3B-205ENST00000405108 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
EFR3B-205ENST00000405108 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
EFR3B-205ENST00000405108 SLIT3O75094 1523 aa17.06■□□□□ 0.32
EFR3B-205ENST00000405108 PHRF1Q9P1Y6 1649 aaKnown RBP17.06■□□□□ 0.32
EFR3B-205ENST00000405108 DCCP43146 1447 aa17.06■□□□□ 0.32
EFR3B-205ENST00000405108 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
EFR3B-205ENST00000405108 AXIN2Q9Y2T1 843 aa17.05■□□□□ 0.32
EFR3B-205ENST00000405108 USP19O94966 1318 aa17.05■□□□□ 0.32
EFR3B-205ENST00000405108 RGS12O14924 1447 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms